[Ref.: #6595] |
Sample type/isolated from |
human feces |
|
[Ref.: #46811] |
Sample type/isolated from |
Human intestine,adult |
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[Ref.: #67770] |
Sample type/isolated from |
Human feces |
|
[Ref.: #117216] |
Sample type/isolated from |
Human, Feces |
[Ref.: #117216] |
Isolation date |
1969 |
* marker position based on {}
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Isolation sources categories |
#Host |
#Human |
- |
#Host Body Product |
#Gastrointestinal tract |
#Feces (Stool) |
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Information on genomic background e.g. entries in nucleic sequence databass Sequence information
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16S Sequence information: |
Only first 5 entries are displayed. Click here to see all.Click here to see only first 5 entries. |
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Sequence accession description |
Seq. accession number |
Sequence length (bp) |
Sequence database |
Associated NCBI tax ID |
|
[Ref.: #67770] |
Bifidobacterium catenulatum gene for 16S ribosomal RNA, partial sequence, strain: JCM 1194 |
LC071794 |
1417 |
|
566552 tax ID |
[Ref.: #67770] |
Bifidobacterium catenulatum gene for 16S ribosomal RNA, partial sequence |
AB437357 |
1509 |
|
1686 tax ID |
[Ref.: #20218] |
Bifidobacterium catenulatum 16S ribosomal RNA gene, partial sequence |
AF432082 |
1445 |
|
566552 tax ID |
* |
[Ref.: #20218] |
Bifidobacterium catenulatum 16S ribosomal RNA gene, complete sequence |
M58732 |
1478 |
|
566552 tax ID |
* |
[Ref.: #20218] |
Bifidobacterium catenulatum (ATCC 27539) 16S ribosomal RNA gene, partial |
M84784 |
642 |
|
1686 tax ID |
* |
[Ref.: #20218] |
Bifidobacterium catenulatum ATCC27539 16S-23S intergenic spacer |
U09522 |
492 |
|
566552 tax ID |
* |
[Ref.: #20218] |
Bifidobacterium catenulatum gene for 16S rRNA, partial sequence, strain: JCM 1194 |
AB116294 |
477 |
|
566552 tax ID |
* |
[Ref.: #20218] |
Bifidobacterium catenulatum gene for 16S rRNA, partial sequence, strain: JCM 1194 |
AB507090 |
682 |
|
566552 tax ID |
* |
[Ref.: #20218] |
Bifidobacterium catenulatum strain JCM 1194 16S ribosomal RNA gene, partial sequence |
GQ227710 |
302 |
|
566552 tax ID |
* |
[Ref.: #20218] |
Bifidobacterium catenulatum strain KCTC 3221 16S ribosomal RNA gene, partial sequence |
GU361816 |
1480 |
|
566552 tax ID |
* |
[Ref.: #20218] |
Bifidobacterium pseudocatenulatum strain LMG11043 16S ribosomal RNA gene and 16S-23S ribosomal RNA intergenic spacer, partial sequence |
FJ231742 |
775 |
|
28026 tax ID |
* |
|
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Availability in culture collections External links
[Ref.: #6595] |
Culture collection no. |
DSM 16992, ATCC 27539, CECT 7362, CIP 104175, DSM 20103, CCUG 18366, JCM 1194, BCRC 14667, CCM 4989, CGMCC 1.2197, HAMBI 560, KCTC 3221, LMG 11043, NCAIM B.02017, NCFB 2246, NCIMB 702246, VTT E-011764 |
[Ref.: #71344] |
SI-ID 1246
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* |
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Literature: |
|
Topic |
Title |
Authors |
Journal |
DOI |
Year |
|
Genetics |
Complete genome sequence of Bifidobacterium catenulatum JCM 1194(T) isolated from human feces. |
Morita H, Toh H, Oshima K, Nakano A, Yamashita N, Iioka E, Arakawa K, Suda W, Honda K, Hattori M |
J Biotechnol |
10.1016/j.jbiotec.2015.06.415 |
2015 |
* |
Phylogeny |
Bifidobacterium moukalabense sp. nov., isolated from the faeces of wild west lowland gorilla (Gorilla gorilla gorilla). |
Tsuchida S, Takahashi S, Nguema PPM, Fujita S, Kitahara M, Yamagiwa J, Ngomanda A, Ohkuma M, Ushida K |
Int J Syst Evol Microbiol |
10.1099/ijs.0.055186-0 |
2013 |
* |
Metabolism |
The potential of bifidobacteria as a source of natural folate. |
D'Aimmo MR, Mattarelli P, Biavati B, Carlsson NG, Andlid T |
J Appl Microbiol |
10.1111/j.1365-2672.2012.05261.x |
2012 |
* |
Phylogeny |
Bifidobacterium kashiwanohense sp. nov., isolated from healthy infant faeces. |
Morita H, Nakano A, Onoda H, Toh H, Oshima K, Takami H, Murakami M, Fukuda S, Takizawa T, Kuwahara T, Ohno H, Tanabe S, Hattori M |
Int J Syst Evol Microbiol |
10.1099/ijs.0.024521-0 |
2010 |
* |
Metabolism |
Probiotic bifidobacteria protect mice from lethal infection with Shiga toxin-producing Escherichia coli O157:H7. |
Asahara T, Shimizu K, Nomoto K, Hamabata T, Ozawa A, Takeda Y |
Infect Immun |
10.1128/IAI.72.4.2240-2247.2004 |
2004 |
* |
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- References
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#6595 |
Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ;
DSM 16992
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#34555 |
; Curators of the CIP;
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-
#46811 |
Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG;
CCUG 18366
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#67770 |
Japan Collection of Microorganism (JCM) ; Curators of the JCM;
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-
#68371 |
Automatically annotated from API 50CH acid .
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#68380 |
Automatically annotated from API rID32A .
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-
#69479 |
João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.:
MicrobeAtlas 1.0 beta
.
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#71344 |
Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.:
StrainInfo: A central database for resolving microbial strain identifiers
.
(
DOI 10.60712/SI-ID1246.1 )
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#117216 |
Collection of Institut Pasteur ; Curators of the CIP;
CIP 104175
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- * These data were automatically processed and therefore are not curated
Change proposal
Successfully sent
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