Bacteroides faecichinchillae (DSM 110161, NM45_B5)

Name: Bacteroides faecichinchillae (DSM 110161, NM45_B5)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 169634

Type strain

Strain Designation NM45_B5

Culture col. no. DSM 110161 NM45_B5

NCBI tax ID(s) 871325

Special Collections Mouse-Microbiome 2 DSMZ DZIF

Links

Bacteroides faecichinchillae NM45_B5 is a mesophilic prokaryote that was isolated from caecal/colon content; C57BL/6, APCmin/+ Msh2-/-, 9-week-old mouse.

mesophilic genome sequence

Name and taxonomic classification

SI-ID 405932

DSM 110161

@ref 20215

Last LPSN update 2025-12-16 10:10:37

Domain Pseudomonadati

Phylum Bacteroidota

Class Bacteroidia

Order Bacteroidales

Family Bacteroidaceae

Genus Bacteroides

Species Bacteroides faecichinchillae

Full scientific name Bacteroides faecichinchillae Kitahara et al. 2012

BacDive ID	Other strains from **Bacteroides faecichinchillae** (1)	Type strain
22936	B. faecichinchillae ST37, DSM 26883, CCUG 60873, JCM 17102, KCTC ... (type strain)

Morphology

Cell morphology

@ref	Gram stain	Confidence
125438	negative	93.915

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
68957	CHOPPED MEAT MEDIUM (DSMZ Medium 78)	Medium recipe at MediaDive	Name: CHOPPED MEAT MEDIUM (DSMZ Medium 78) Composition: Ground beef 487.805 g/l Casitone 29.2683 g/l Agar 14.6341 g/l K2HPO4 4.87805 g/l Yeast extract 4.87805 g/l L-Cysteine HCl 0.487805 g/l Ethanol 0.185366 g/l Haemin 0.00487805 g/l Resazurin 0.00097561 g/l Vitamin K3 0.000487805 g/l Vitamin K1 NaOH Distilled water Water
68957	PYG MEDIUM (MODIFIED) (DSMZ Medium 104)	Medium recipe at MediaDive	Name: PYG MEDIUM (MODIFIED) (DSMZ Medium 104) Composition: Yeast extract 10.0 g/l Peptone 5.0 g/l Trypticase peptone 5.0 g/l Beef extract 5.0 g/l Glucose 5.0 g/l L-Cysteine HCl x H2O 0.5 g/l NaHCO3 0.4 g/l NaCl 0.08 g/l K2HPO4 0.04 g/l KH2PO4 0.04 g/l MgSO4 x 7 H2O 0.02 g/l CaCl2 x 2 H2O 0.01 g/l Hemin 0.005 g/l Ethanol 0.0038 g/l Resazurin 0.001 g/l Tween 80 Vitamin K1 NaOH Distilled water
68957	FASTIDIOUS ANAEROBE BROTH (DSMZ Medium 1203a)	Medium recipe at MediaDive	Name: FASTIDIOUS ANAEROBE BROTH (DSMZ Medium 1203a) Composition: Fastidious Anaerobe Basal Broth 35.4 g/l Deionized water

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
68957	positive	growth	37	mesophilic

Physiology and metabolism

Spore formation

@ref	Spore formation	Confidence
125438		91.478

Isolation, sampling and environmental information

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
68957	caecal/colon content; C57BL/6, APCmin/+ Msh2-/-, 9-week-old mouse	Toronto	Canada	CAN	North America

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
68957	1	Risk group (German classification)

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	NCBI tax ID	Score
66792	ASM480164v1 assembly for Bacteroides faecichinchillae NM45_B5	contig	GCA_004801645	871325.8	871325	40.78

Genome browser: GCA_004801645

Genome-based predictions

Predictions

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Bacteroides faecichinchillae NM45_B5
NCBI: GCA_004801645.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	93.92	no
125438	anaerobic	anaerobicⓘ	yes	83.31	no
125438	aerobic	aerobicⓘ	no	91.97	no
125438	spore-forming	spore-formingⓘ	no	91.48	no
125438	thermophilic	thermophileⓘ	no	94.53	no
125438	flagellated	motile2+ⓘ	no	88.50	no

Literature

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#68957	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 110161
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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