Name: Bacteroides faecichinchillae NM45_B5
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 169634

Type strain:

Species: Bacteroides faecichinchillae

Strain Designation: NM45_B5

Culture col. no.: DSM 110161

Strain history: <- W. Navarre, Toronto; NM45_B5

SI-ID 405932

DSM 110161

Other strains from Bacteroides faecichinchillae

B. faecichinchillae ST37, DSM 26883, CCUG 60873, JCM ... (type strain)

Section

Bacteroides faecichinchillae NM45_B5 is a mesophilic bacterium that was isolated from caecal/colon content; C57BL/6, APCmin/+ Msh2-/-, 9-week-old mouse.

mesophilic
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacteroidota*
	Class	*Bacteroidia*
	Order	*Bacteroidales*
	Family	*Bacteroidaceae*
	Genus	*Bacteroides*
	Species	**Bacteroides faecichinchillae**
	Full Scientific Name (LPSN)	Bacteroides faecichinchillae Kitahara et al. 2012

Information on culture and growth conditions Culture and growth conditions

[Ref.: #68957]

Culture medium

CHOPPED MEAT MEDIUM (DSMZ Medium 78)

[Ref.: #68957]

Culture medium growth

[Ref.: #68957]

Culture medium link

Medium recipe provided by DSMZ

[Ref.: #68957]

Culture medium

PYG MEDIUM (MODIFIED) (DSMZ Medium 104)

[Ref.: #68957]

Culture medium growth

[Ref.: #68957]

Culture medium link

Medium recipe provided by DSMZ

[Ref.: #68957]

Culture medium

FASTIDIOUS ANAEROBE BROTH (DSMZ Medium 1203a)

[Ref.: #68957]

Culture medium growth

[Ref.: #68957]

Culture medium link

Medium recipe provided by DSMZ

	Temperatures	Kind of temperature		Temperature
[Ref.: #68957]			growth	37 °C

[Ref.: #68957]

Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #68957]	Sample type/isolated from	caecal/colon content; C57BL/6, APCmin/+ Msh2-/-, 9-week-old mouse
[Ref.: #68957]	Geographic location (country and/or sea, region)	Toronto
[Ref.: #68957]	Country	Canada
[Ref.: #68957]	Country ISO 3 Code	CAN
[Ref.: #68957]	Continent	North America
* marker position based on {}

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #68957]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Bacteroides faecichinchillae NM45_B5	GCA_004801645	contig	GenBank	871325 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Bacteroides faecichinchillae NM45_B5 NCBI: GCA_004801645.1
[Ref.: #69480]	motile	no	90.172	no
[Ref.: #69480]	flagellated	no	96.243	no
[Ref.: #69480]	gram-positive	no	97.355	no
[Ref.: #69480]	anaerobic	yes	96.211	no
[Ref.: #69480]	aerobic	no	96.627	no
[Ref.: #69480]	halophile	no	88.125	no
[Ref.: #69480]	spore-forming	no	94.978	no
[Ref.: #69480]	glucose-util	yes	90.875	no
[Ref.: #69480]	thermophile	no	98.427	yes
[Ref.: #69480]	glucose-ferment	yes	68.991	no

Availability in culture collections External links

[Ref.: #68957]

Culture collection no.

DSM 110161

[Ref.: #115813]

SI-ID 405932

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#68957

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 110161

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#115813

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID405932.1 )

* These data were automatically processed and therefore are not curated

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