[Ref.: #8482] |
Sample type/isolated from |
intestine of infant |
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[Ref.: #67770] |
Sample type/isolated from |
Intestine of infant |
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[Ref.: #117003] |
Sample type/isolated from |
Human, Infant, intestine |
* marker position based on {}
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Isolation sources categories |
#Host |
#Human |
#Child |
#Host Body-Site |
#Gastrointestinal tract |
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Information on genomic background e.g. entries in nucleic sequence databass Sequence information
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16S Sequence information: |
Only first 5 entries are displayed. Click here to see all.Click here to see only first 5 entries. |
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Sequence accession description |
Seq. accession number |
Sequence length (bp) |
Sequence database |
Associated NCBI tax ID |
|
[Ref.: #67770] |
Bifidobacterium breve gene for 16S ribosomal RNA, partial sequence, strain: JCM 1192 |
LC071793 |
1418 |
|
518634 tax ID |
[Ref.: #20218] |
Bifidobacterium breve gene for 16S rRNA, partial sequence, strain: ATCC 15700 |
AB006658 |
1520 |
|
518634 tax ID |
* |
[Ref.: #20218] |
Bifidobacterium breve partial 16S rRNA gene, type strain ATCC 15700T |
AM411121 |
179 |
|
518634 tax ID |
* |
[Ref.: #20218] |
Bifidobacterium breve 16S ribosomal RNA |
M58731 |
1536 |
|
1685 tax ID |
* |
[Ref.: #20218] |
Bifodibacterium breve (ATCC 15700) 16S ribosomal RNA gene, partial |
M84776 |
642 |
|
1685 tax ID |
* |
[Ref.: #20218] |
Bifidobacterium breve strain DSM 20213 16S ribosomal RNA gene, partial sequence |
HQ012023 |
939 |
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518634 tax ID |
* |
[Ref.: #20218] |
Bifidobacterium breve gene for 16S rRNA, partial sequence, strain: JCM 1192 |
AB116288 |
479 |
|
518634 tax ID |
* |
[Ref.: #20218] |
Bifidobacterium breve gene for 16S rRNA, partial sequence, strain: JCM 1192 |
AB507084 |
672 |
|
518634 tax ID |
* |
[Ref.: #20218] |
Bifidobacterium breve strain KCTC 3220 16S ribosomal RNA gene, partial sequence |
GU361815 |
1483 |
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1685 tax ID |
* |
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Availability in culture collections External links
[Ref.: #8482] |
Culture collection no. |
DSM 20213, ATCC 15700, NCTC 11815, JCM 1192, BCRC 11846, CCUG 18365, CCUG 30511, CECT 4839, CGMCC 1.2213, CIP 64.69, KCTC 3220, LMG 10501, LMG 11042, NCFB 2257, NCDO 2257, WDCM 00224 |
[Ref.: #71342] |
SI-ID 92168
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* |
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Literature: |
Only first 10 entries are displayed. Click here to see all.Click here to see only first 10 entries. |
|
Topic |
Title |
Authors |
Journal |
DOI |
Year |
|
Phylogeny |
Comparison of 16S rRNA Gene Based Microbial Profiling Using Five Next-Generation Sequencers and Various Primers. |
Park C, Kim SB, Choi SH, Kim S |
Front Microbiol |
10.3389/fmicb.2021.715500 |
2021 |
* |
Pathogenicity |
Safety Evaluation of Bifidobacterium breve IDCC4401 Isolated from Infant Feces for Use as a Commercial Probiotic. |
Choi IY, Kim J, Kim SH, Ban OH, Yang J, Park MK |
J Microbiol Biotechnol |
10.4014/jmb.2103.03041 |
2021 |
* |
Biotechnology |
Impact of prebiotics on equol production from soymilk isoflavones by two Bifidobacterium species. |
Mustafa SE, Mustafa S, Ismail A, Abas F, Abd Manap MY, Ahmed Hamdi OA, Elzen S, Nahar L, Sarker SD |
Heliyon |
10.1016/j.heliyon.2020.e05298 |
2020 |
* |
Metabolism |
Linoleic acid induces metabolic stress in the intestinal microorganism Bifidobacterium breve DSM 20213. |
Senizza A, Rocchetti G, Callegari ML, Lucini L, Morelli L |
Sci Rep |
10.1038/s41598-020-62897-w |
2020 |
* |
Enzymology |
Highly Selective Production of Compound K from Ginsenoside Rd by Hydrolyzing Glucose at C-3 Glycoside Using beta-Glucosidase of Bifidobacterium breve ATCC 15700. |
Zhang R, Huang XM, Yan HJ, Liu XY, Zhou Q, Luo ZY, Tan XN, Zhang BL |
J Microbiol Biotechnol |
10.4014/jmb.1808.08059 |
2019 |
* |
Phylogeny |
Bifidobacterium callitrichidarum sp. nov. from the faeces of the emperor tamarin (Saguinus imperator). |
Modesto M, Michelini S, Sansosti MC, De Filippo C, Cavalieri D, Qvirist L, Andlid T, Spiezio C, Sandri C, Pascarelli S, Sgorbati B, Mattarelli P |
Int J Syst Evol Microbiol |
10.1099/ijsem.0.002472 |
2017 |
* |
Metabolism |
Human milk oligosaccharide consumption by probiotic and human-associated bifidobacteria and lactobacilli. |
Thongaram T, Hoeflinger JL, Chow J, Miller MJ |
J Dairy Sci |
10.3168/jds.2017-12753 |
2017 |
* |
Metabolism |
Mechanistic Study of Utilization of Water-Insoluble Saccharomyces cerevisiae Glucans by Bifidobacterium breve Strain JCM1192. |
Keung HY, Li TK, Sham LT, Cheung MK, Cheung PCK, Kwan HS |
Appl Environ Microbiol |
10.1128/AEM.03442-16 |
2017 |
* |
Enzymology |
In vitro and in vivo evaluation of the prebiotic effect of raw and roasted almonds (Prunus amygdalus). |
Liu Z, Wang W, Huang G, Zhang W, Ni L |
J Sci Food Agric |
10.1002/jsfa.7604 |
2016 |
* |
Pathogenicity |
Interaction of mouse splenocytes and macrophages with bacterial strains in vitro: the effect of age in the immune response. |
Van Beek AA, Hoogerland JA, Belzer C, De Vos P, De Vos WM, Savelkoul HF, Leenen PJ |
Benef Microbes |
10.3920/BM2015.0094 |
2015 |
* |
Genetics |
Complete genome sequence of Bifidobacterium breve JCM 1192(T) isolated from infant feces. |
Morita H, Toh H, Oshima K, Nakano A, Omori E, Hattori Y, Arakawa K, Suda W, Honda K, Hattori M |
J Biotechnol |
10.1016/j.jbiotec.2015.06.414 |
2015 |
* |
Pathogenicity |
RNA of Enterococcus faecalis Strain EC-12 Is a Major Component Inducing Interleukin-12 Production from Human Monocytic Cells. |
Nishibayashi R, Inoue R, Harada Y, Watanabe T, Makioka Y, Ushida K |
PLoS One |
10.1371/journal.pone.0129806 |
2015 |
* |
Metabolism |
Two beta-galactosidases from the human isolate Bifidobacterium breve DSM 20213: molecular cloning and expression, biochemical characterization and synthesis of galacto-oligosaccharides. |
Arreola SL, Intanon M, Suljic J, Kittl R, Pham NH, Kosma P, Haltrich D, Nguyen TH |
PLoS One |
10.1371/journal.pone.0104056 |
2014 |
* |
Phylogeny |
Isolation of a bifidogenic peptide from the pepsin hydrolysate of bovine lactoferrin. |
Oda H, Wakabayashi H, Yamauchi K, Sato T, Xiao JZ, Abe F, Iwatsuki K |
Appl Environ Microbiol |
10.1128/AEM.03343-12 |
2013 |
* |
Pathogenicity |
Identification and accurate quantitation of biological oligosaccharide mixtures. |
Strum JS, Kim J, Wu S, De Leoz ML, Peacock K, Grimm R, German JB, Mills DA, Lebrilla CB |
Anal Chem |
10.1021/ac301128s |
2012 |
* |
Metabolism |
Characterization of a Panela cheese with added probiotics and fava bean starch. |
Escobar MC, Van Tassell ML, Martinez-Bustos F, Singh M, Castano-Tostado E, Amaya-Llano SL, Miller MJ |
J Dairy Sci |
10.3168/jds.2011-4655 |
2012 |
* |
Metabolism |
Physiology of consumption of human milk oligosaccharides by infant gut-associated bifidobacteria. |
Asakuma S, Hatakeyama E, Urashima T, Yoshida E, Katayama T, Yamamoto K, Kumagai H, Ashida H, Hirose J, Kitaoka M |
J Biol Chem |
10.1074/jbc.M111.248138 |
2011 |
* |
Pathogenicity |
The influence of some probiotic supernatants on the growth and virulence features expression of several selected enteroaggregative E. coli clinical strains. |
Lazar V, Miyazaki Y, Hanawa T, Chifiriuc MC, Ditu LM, Marutescu L, Bleotu C, Kamiya S |
Roum Arch Microbiol Immunol |
|
2009 |
* |
Metabolism |
In vitro fermentation of arabinoxylan-derived carbohydrates by bifidobacteria and mixed fecal microbiota. |
Pastell H, Westermann P, Meyer AS, Tuomainen P, Tenkanen M |
J Agric Food Chem |
10.1021/jf901397b |
2009 |
* |
Pathogenicity |
Synbiotic promotion of epithelial proliferation by orally ingested encapsulated Bifidobacterium breve and raffinose in the small intestine of rats. |
Ishizuka S, Iwama A, Dinoto A, Suksomcheep A, Maeta K, Kasai T, Hara H, Yokota A |
Mol Nutr Food Res |
10.1002/mnfr.200800041 |
2009 |
* |
Pathogenicity |
Oral administration of Bifidobacterium longum prevents gut-derived Pseudomonas aeruginosa sepsis in mice. |
Matsumoto T, Ishikawa H, Tateda K, Yaeshima T, Ishibashi N, Yamaguchi K |
J Appl Microbiol |
10.1111/j.1365-2672.2007.03593.x |
2007 |
* |
Pathogenicity |
Yoghurt fermented by Lactobacillus delbrueckii subsp. bulgaricus H+ -ATPase-defective mutants exhibits enhanced viability of Bifidobacterium breve during storage. |
Ongol MP, Sawatari Y, Ebina Y, Sone T, Tanaka M, Tomita F, Yokota A, Asano K |
Int J Food Microbiol |
10.1016/j.ijfoodmicro.2007.02.019 |
2007 |
* |
Pathogenicity |
Mechanism of growth inhibition by free bile acids in lactobacilli and bifidobacteria. |
Kurdi P, Kawanishi K, Mizutani K, Yokota A |
J Bacteriol |
10.1128/JB.188.5.1979-1986.2006 |
2006 |
* |
Phylogeny |
Modulation of rat cecal microbiota by administration of raffinose and encapsulated Bifidobacterium breve. |
Dinoto A, Suksomcheep A, Ishizuka S, Kimura H, Hanada S, Kamagata Y, Asano K, Tomita F, Yokota A |
Appl Environ Microbiol |
10.1128/AEM.72.1.784-792.2006 |
2006 |
* |
Metabolism |
Growth-promoting effects of lactoferrin on L. acidophilus and Bifidobacterium spp. |
Kim WS, Ohashi M, Tanaka T, Kumura H, Kim GY, Kwon IK, Goh JS, Shimazaki K |
Biometals |
10.1023/b:biom.0000027705.57430.f1 |
2004 |
* |
Metabolism |
Cholic acid accumulation and its diminution by short-chain fatty acids in bifidobacteria. |
Kurdi P, Tanaka H, van Veen HW, Asano K, Tomita F, Yokota A |
Microbiology (Reading) |
10.1099/mic.0.26376-0 |
2003 |
* |
Metabolism |
The effect of nisin on the physiology of Bifidobacterium thermophilum. |
Kot E, Murad Y, Bezkorovainy A |
J Food Prot |
10.4315/0362-028x-64.8.1206 |
2001 |
* |
Cultivation |
Effects of fructooligosaccharides and their monomeric components on bile salt resistance in three species of bifidobacteria. |
Perrin S, Grill JP, Schneider F |
J Appl Microbiol |
10.1046/j.1365-2672.2000.01070.x |
2000 |
* |
Metabolism |
Involvement of trihydroxyconjugated bile salts in cholesterol assimilation by bifidobacteria. |
Tahri K, Grill JP, Schneider F |
Curr Microbiol |
10.1007/s002849900148 |
1997 |
* |
Pathogenicity |
Effect of bifidogenic factors on growth characteristics of bifidobacteria in infant formulas. |
Dubey UK, Mistry VV |
J Dairy Sci |
10.3168/jds.S0022-0302(96)76469-X |
1996 |
* |
Pathogenicity |
Growth characteristics of bifidobacteria in infant formulas. |
Dubey UK, Mistry VV |
J Dairy Sci |
10.3168/jds.S0022-0302(96)76468-8 |
1996 |
* |
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Evaluation of Bifidobacteria and Lactobacillus Probiotics as Alternative Therapy for Salmonella typhimurium Infection in Broiler Chickens. |
El-Sharkawy H, Tahoun A, Rizk AM, Suzuki T, Elmonir W, Nassef E, Shukry M, Germoush MO, Farrag F, Bin-Jumah M, Mahmoud AM |
Animals (Basel) |
10.3390/ani10061023 |
2020 |
* |
|
Effects of Linoleic Acid on Gut-Derived Bifidobacterium breve DSM 20213: A Transcriptomic Approach. |
Senizza A, Callegari ML, Senizza B, Minuti A, Rocchetti G, Morelli L, Patrone V |
Microorganisms |
10.3390/microorganisms7120710 |
2019 |
* |
|
Supplementation with Lactobacillus plantarum WCFS1 Prevents Decline of Mucus Barrier in Colon of Accelerated Aging Ercc1(-/Delta7) Mice. |
van Beek AA, Sovran B, Hugenholtz F, Meijer B, Hoogerland JA, Mihailova V, van der Ploeg C, Belzer C, Boekschoten MV, Hoeijmakers JH, Vermeij WP, de Vos P, Wells JM, Leenen PJ, Nicoletti C, Hendriks RW, Savelkoul HF |
Front Immunol |
10.3389/fimmu.2016.00408 |
2016 |
* |
|
A Novel Lactobacillus casei LP1 Producing 1,4-Dihydroxy-2-Naphthoic Acid, a Bifidogenic Growth Stimulator. |
Kang JE, Kim TJ, Moon GS |
Prev Nutr Food Sci |
10.3746/pnf.2015.20.1.78 |
2015 |
* |
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- References
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#8482 |
Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ;
DSM 20213
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#42088 |
; Curators of the CIP;
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#66794 |
Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg:
BRENDA, the ELIXIR core data resource in 2021: new developments and updates.
Nucleic Acids Res. 49:
D498 - D508
2020 (
DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )
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#67770 |
Japan Collection of Microorganism (JCM) ; Curators of the JCM;
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#68371 |
Automatically annotated from API 50CH acid .
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#68382 |
Automatically annotated from API zym .
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#69479 |
João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.:
MicrobeAtlas 1.0 beta
.
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#71342 |
Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.:
StrainInfo: A central database for resolving microbial strain identifiers
.
(
DOI 10.60712/SI-ID92168.1 )
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#117003 |
Collection of Institut Pasteur ; Curators of the CIP;
CIP 64.69
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- * These data were automatically processed and therefore are not curated
Change proposal
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