Name: Paenibacillus allorhizoplanae JJ-42
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 169315

Type strain:

Species: Paenibacillus allorhizoplanae

Strain Designation: JJ-42

Culture col. no.: DSM 111786, LMG 32089, CCM 9085, CIP 111891

Strain history: <- P. Kämpfer, Justus-Liebig-Universität, Giessen, Germany; <- J. A. McInroy, Department of Entomology and Plant Pathology, Auburn University, Alabama, USA; JJ-42

SI-ID 402363

DSM 111786

Section

Paenibacillus allorhizoplanae JJ-42 is a mesophilic bacterium that was isolated from root surface of maize .

mesophilic
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Caryophanales*
	Family	*Paenibacillaceae*
	Genus	*Paenibacillus*
	Species	**Paenibacillus allorhizoplanae**
	Full Scientific Name (LPSN)	Paenibacillus allorhizoplanae Kämpfer et al. 2023

Information on culture and growth conditions Culture and growth conditions

[Ref.: #68570]

Culture medium

R2A MEDIUM (DSMZ Medium 830)

[Ref.: #68570]

Culture medium growth

[Ref.: #68570]

Culture medium link

Medium recipe provided by DSMZ

	Temperatures	Kind of temperature		Temperature
[Ref.: #68570]			growth	30 °C

[Ref.: #68570]

Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #68570]	Sample type/isolated from	root surface of maize (Zea mays)
[Ref.: #68570]	Geographic location (country and/or sea, region)	Dunbar, Nebraska
[Ref.: #68570]	Country	USA
[Ref.: #68570]	Country ISO 3 Code	USA
[Ref.: #68570]	Continent	North America
* marker position based on {}

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Paenibacillus allorhizoplanae CIP 111891	GCA_927798215	scaffold	GenBank	2905648 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Paenibacillus sp. JJ-42 CIP111891 NCBI: GCA_927798215.1
[Ref.: #69480]	aerobic	yes	80.066	no
[Ref.: #69480]	flagellated	yes	87.148	no
[Ref.: #69480]	gram-positive	yes	79.14	no
[Ref.: #69480]	anaerobic	no	99.182	no
[Ref.: #69480]	halophile	no	95.439	no
[Ref.: #69480]	spore-forming	yes	92.423	no
[Ref.: #69480]	thermophile	no	99.795	yes
[Ref.: #69480]	glucose-util	yes	88.955	no
[Ref.: #69480]	motile	yes	90.884	no
[Ref.: #69480]	glucose-ferment	no	92.586	no

Availability in culture collections External links

[Ref.: #68570]

Culture collection no.

DSM 111786, LMG 32089, CCM 9085, CIP 111891

[Ref.: #115548]

SI-ID 402363

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Paenibacillus allorhizoplanae sp. nov. from the rhizoplane of a Zea mays root.	Kampfer P, Lipski A, Lamothe L, Clermont D, Criscuolo A, McInroy JA, Glaeser SP	Arch Microbiol	10.1007/s00203-022-03225-w	2022	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#68570

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 111786

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#115548

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID402363.1 )

* These data were automatically processed and therefore are not curated

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Paenibacillus sp. JJ-42 CIP111891

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