Name: unclassified bacterium D16
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 169308

Type strain:

Species: unclassified bacterium

Strain Designation: D16, 4/1/38B

Culture col. no.: DSM 27791, BEI HM-79

Strain history: <- E. Allen-Vercoe, Univ. Guelph, Ontario, Canada; 4/1/38B <- Univ. Calgary, Canada

Other strains from unclassified bacterium

u. bacterium OL, DSM 104464, VKM B-3021 (type strain)
u. bacterium CreDm1, DSM 6526
u. bacterium LD64, DSM 11001
u. bacterium DSM 4029, ATCC 29733, VPI C48-50
u. bacterium SIO, DSM 2170, ATCC 19263, CCM ...
u. bacterium 008-523, DSM 3039
u. bacterium B6, DSM 3644
u. bacterium Re10, DSM 4661
u. bacterium Wo021, DSM 5672
u. bacterium KN032, DSM 5673
u. bacterium US2, DSM 5848
u. bacterium PHB, DSM 6754
u. bacterium FlGlyM, DSM 6945
u. bacterium 16AV, DSM 8385
u. bacterium DMA, DSM 8827
u. bacterium Ia3, DSM 10066
u. bacterium LFR, DSM 10174, ATCC 51258
u. bacterium 19gly3, DSM 11262
u. bacterium RZLAS, DSM 11480
u. bacterium DSM 11764, MUA MuA21, MUA 21
u. bacterium mXyS1, DSM 12567
u. bacterium PB90-2, DSM 12558
u. bacterium XB90, DSM 12595
u. bacterium 72Chol, DSM 12783
u. bacterium 4AA7, DSM 13636
u. bacterium NapHS2, DSM 14454
u. bacterium EbS7, DSM 15769
u. bacterium MLMS-1, DSM 17814
u. bacterium 95, DSM 30001, ATCC 19103, IAM ...
u. bacterium EL-44, DSM 11444
u. bacterium EL-182, DSM 12549
u. bacterium agV6, DSM 13281
u. bacterium AZD10A1, DSM 17878, CCUG 52015
u. bacterium AP57, DSM 18372, CECT 7177
u. bacterium CH 1359, DSM 12902
u. bacterium DSM 14861, HEL Hel43, HEL 43
u. bacterium JWIYJL-CPRB 1, JW/YJL-CPRB1, DSM ...
u. bacterium G.Slu-02, DSM 21096
u. bacterium L-1031, DSM 22395
u. bacterium CHL6 7, DSM 10147
u. bacterium CHL6 8, DSM 10148
u. bacterium DSM 17195, Jamm 0065
u. bacterium FSW06-301, DSM 27188
u. bacterium CL-2, DSM 28716, CSUR P1230
u. bacterium SB2, DSM 100743, CSUR P1926
u. bacterium P2414, DSM 102218, CSUR P2414
u. bacterium DSM 102883, CSUR P2434, Marseille-2434
u. bacterium LC8, DSM 103728
u. bacterium DSM 53758, CB Cb502, CB 502
u. bacterium FGR15-07, DSM 26766, KACC 15970
u. bacterium DSM 27371, WR 21
u. bacterium UV 2.5, DSM 100784
u. bacterium 2-bin, DSM 105719, KCTC 32235, ...
u. bacterium S15, CCUG 68986, DSM 105791, CIP ...
u. bacterium RS22 G, DSM 23554
u. bacterium HV4-6-A5C, DSM 104144
u. bacterium HV4-5-B5C, DSM 104463
u. bacterium Melo94, DSM 105095
u. bacterium f-CSY, f_CSY, DSM 107475
u. bacterium f-RGN, f_RGN, DSM 107527
u. bacterium f-CXY, f_CXY, DSM 107528
u. bacterium APC924/74, DSM 108024
u. bacterium H2-39, H2_39, DSM 108347
u. bacterium 639, DSM 10557, IFAM 3594
u. bacterium DSM 23666, CAT 12a
u. bacterium B1107, A0630, DSM 24543, CGMCC ...
u. bacterium AO627, B1132, DSM 24544, CGMCC ...
u. bacterium GH-B6, DSM 24633
u. bacterium HV4-5-C5C, DSM 103941
u. bacterium H3_16, DSM 108225
u. bacterium 6/3/54 A FAA, DSM 24432
u. bacterium IFRC300, DSM 24590
u. bacterium KNH, DSM 24760
u. bacterium CP 19, DSM 24779
u. bacterium NYFB, DSM 25439
u. bacterium M3/9, DSM 100058
u. bacterium 7D4C2, DSM 110548
u. bacterium NM08_P-01, NM08, P-01, DSM 110563

Section

unclassified bacterium D16 is a mesophilic prokaryote that was isolated from clinical sample, human gut biopsy.

mesophilic

Information on the name and the taxonomic classification. Name and taxonomic classification

[Ref.: #68561]	Phylum	Not assigned to order
[Ref.: #68561]	Class	Not assigned to order
[Ref.: #68561]	Order	Not assigned to order
[Ref.: #68561]	Family	Not assigned to family
[Ref.: #68561]	Genus	unclassified
[Ref.: #68561]	Species	unclassified bacterium
[Ref.: #68561]	Full Scientific Name	unclassified bacterium
[Ref.: #68561]	Strain Designation	D16, 4/1/38B

Information on culture and growth conditions Culture and growth conditions

[Ref.: #68561]

Culture medium

COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)

[Ref.: #68561]

Culture medium growth

[Ref.: #68561]

Culture medium link

Medium recipe provided by DSMZ

[Ref.: #68561]

Culture medium

CHOPPED MEAT MEDIUM (DSMZ Medium 78)

[Ref.: #68561]

Culture medium growth

[Ref.: #68561]

Culture medium link

Medium recipe provided by DSMZ

	Temperatures	Kind of temperature		Temperature
[Ref.: #68561]			growth	37 °C

[Ref.: #68561]

Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68380]	arginine ChEBI	-	hydrolysis	* from API rID32A
[Ref.: #68380]	D-mannose ChEBI	-	fermentation	* from API rID32A
[Ref.: #68380]	L-glutamate ChEBI	-	degradation	* from API rID32A
[Ref.: #68380]	nitrate ChEBI	-	reduction	* from API rID32A
[Ref.: #68380]	raffinose ChEBI	-	fermentation	* from API rID32A
[Ref.: #68380]	tryptophan ChEBI	-	energy source	* from API rID32A
[Ref.: #68380]	urea ChEBI	-	hydrolysis	* from API rID32A

	Metabolite production	Metabolite	Production
[Ref.: #68380]		indole ChEBI	no	* from API rID32A

	Physiological tests	Metabolite	Indole test
[Ref.: #68380]		indole ChEBI	-	* from API rID32A

	Enzyme	Enzyme activity	EC number
[Ref.: #68380]	alanine arylamidase	-	3.4.11.2	* from API rID32A
[Ref.: #68380]	alkaline phosphatase	-	3.1.3.1	* from API rID32A
[Ref.: #68380]	alpha-arabinosidase	-	3.2.1.55	* from API rID32A
[Ref.: #68380]	alpha-fucosidase	-	3.2.1.51	* from API rID32A
[Ref.: #68380]	alpha-galactosidase	+	3.2.1.22	* from API rID32A
[Ref.: #68380]	alpha-glucosidase	-	3.2.1.20	* from API rID32A
[Ref.: #68380]	arginine dihydrolase	-	3.5.3.6	* from API rID32A
[Ref.: #68380]	beta-galactosidase	-	3.2.1.23	* from API rID32A
[Ref.: #68380]	beta-Galactosidase 6-phosphate	-		* from API rID32A
[Ref.: #68380]	beta-glucosidase	+	3.2.1.21	* from API rID32A
[Ref.: #68380]	beta-glucuronidase	-	3.2.1.31	* from API rID32A
[Ref.: #68380]	glutamate decarboxylase	-	4.1.1.15	* from API rID32A
[Ref.: #68380]	glutamyl-glutamate arylamidase	-		* from API rID32A
[Ref.: #68380]	glycin arylamidase	-		* from API rID32A
[Ref.: #68380]	histidine arylamidase	-		* from API rID32A
[Ref.: #68380]	L-arginine arylamidase	-		* from API rID32A
[Ref.: #68380]	leucine arylamidase	-	3.4.11.1	* from API rID32A
[Ref.: #68380]	leucyl glycin arylamidase	-	3.4.11.1	* from API rID32A
[Ref.: #68380]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API rID32A
[Ref.: #68380]	phenylalanine arylamidase	-		* from API rID32A
[Ref.: #68380]	proline-arylamidase	-	3.4.11.5	* from API rID32A
[Ref.: #68380]	pyrrolidonyl arylamidase	-	3.4.19.3	* from API rID32A
[Ref.: #68380]	serine arylamidase	-		* from API rID32A
[Ref.: #68380]	tryptophan deaminase	-	4.1.99.1	* from API rID32A
[Ref.: #68380]	tyrosine arylamidase	-		* from API rID32A
[Ref.: #68380]	urease	-	3.5.1.5	* from API rID32A
	Only first 10 entries are displayed. Click here to see all.

API® rID32A:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Urease/urea hydrolysisURE	Arginine dihydrolaseADH (Arg)	alpha-Galactosidasealpha GAL	beta-Galactosidasebeta GAL	beta-Galactosidase 6-phosphatebeta GP	alpha-Glucosidasealpha GLU	beta-Glucosidasebeta GLU	alpha-Arabinosidasealpha ARA	beta-Glucuronidasebeta GUR	beta-N-Acetyl-beta-glucosaminidasebeta NAG	Fermentation of D-mannoseMNE	Fermentation of raffinoseRAF	Glutamate decarboxylaseGDC	alpha-Fucosidasealpha FUC	Reduction of nitrateNIT	Indole productionIND	Alkaline phosphatasePAL	L-arginine arylamidaseArgA	Proline arylamidaseProA	Leucyl glycin arylamidaseLGA	Phenylalanine arylamidasePheA	Leucine arylamidaseLeuA	Pyrrolidonyl arylamidasePyrA	Tyrosine arylamidaseTyrA	Alanine arylamidaseAlaA	Glycin arylamidaseGlyA	Histidine arylamidaseHisA	Glutamyl-glutamate arylamidaseGGA	Serine arylamidaseSerA
[Ref.: #68561]	12478	-	-	+	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #68561]	Sample type/isolated from	clinical sample, human gut biopsy
[Ref.: #68561]	Geographic location (country and/or sea, region)	Alberta
[Ref.: #68561]	Country	Canada
[Ref.: #68561]	Country ISO 3 Code	CAN
[Ref.: #68561]	Continent	North America
* marker position based on {}

Availability in culture collections External links

[Ref.: #68561]

Culture collection no.

DSM 27791, BEI HM-79

References

#68380

Automatically annotated from API rID32A .

#68561

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 27791

* These data were automatically processed and therefore are not curated

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