Actinomadura kijaniata (DSM 43764, ATCC 31588, CCRC 13146)

Name: Actinomadura kijaniata (DSM 43764, ATCC 31588, CCRC 13146)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 16929

Type strain

Strain Designation SSC 1256, 13-363

Culture col. no. DSM 43764 ATCC 31588 CCRC 13146 IFO 14229 IMET 9741 20 more

NCBI tax ID(s) 1220561 46161

Special Collections DSMZ JCM KCTC Wink compendium JMRC

History DSMZ <- N.S. Agre, VKM <- Schering Corp., SSC 1256 KCTC <- JCM <- KCC <- MS2153 <- ATCC <- Schering Corp.SCC1256 JCM <-- KCC A-0306 <-- MS 2153 <-- ATCC 31588 <-- Schering Corp.; SCC 1256.

Links

Actinomadura kijaniata SSC 1256 is an aerobe, Gram-positive bacterium that builds an aerial mycelium and produces antibiotic compounds.

antibiotic compound production Gram-positive aerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 38247

MTCC 707,ATCC 31588,DSM 43764,IMET 9741,JCM 3306,CCRC 13416,IFO 14229,NRRL 12069,NRRL B-16261,KCTC 9129,NBRC 14229,BCRC 13416,NCIMB 13755,CGMCC 4.2099,VKM Ac-874

@ref 20215

Last LPSN update 2026-05-29 08:28:53

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Streptosporangiales

Family Thermomonosporaceae

Genus Actinomadura

Species Actinomadura kijaniata

Full scientific name Actinomadura kijaniata Horan and Brodsky 1982

Morphology

Cell morphology

@ref	Gram stain	Confidence
67771	positive
125439	positive	99.587
125439		94.778

Colony morphology

@ref	Colony color	Incubation period	Medium used
19586	Dark green	10-14 days	ISP 2
19586	Dark green	10-14 days	ISP 3
19586	Dark green	10-14 days	ISP 4
19586	Dark green	10-14 days	ISP 5
19586	Bright green	10-14 days	ISP 6
19586	Bright green	10-14 days	ISP 7

Multicellular morphology

@ref	Complex name	Complex color	Medium name
19586	Aerial Mycelium	White	ISP 2
19586	Aerial Mycelium	White	ISP 3
19586			ISP 4
19586			ISP 5
19586			ISP 6
19586			ISP 7

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
11052	GPHF-MEDIUM (DSMZ Medium 553)	Medium recipe at MediaDive	Name: GPHF-MEDIUM (DSMZ Medium 553) Composition: Agar 20.0 g/l Glucose 10.0 g/l Beef extract 5.0 g/l Yeast extract 5.0 g/l Casein peptone 5.0 g/l CaCl2 x 2 H2O 0.74 g/l Distilled water
19586	ISP 2		Name: ISP 2 / Yeast Malt Agar (5265); 5265 Composition Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l Agar 15.0 g/l Preparation: Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.0 Usage: Maintenance and Taxonomy Organisms: All Actinomycetes
19586	ISP 3		Name: ISP 3; 5315 Composition Dog oat flakes 20.0 g/l Trace element solution (5314) 2.5 ml/l Agar 18.0 g/l Preparation: Oat flakes are cooked for 20 minutes, trace element solution and agar are added (in the case of non rolled oat flakes the suspension has to bee filtrated). Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.8 Usage: Maintenance and taxonomy (e.g. SEM As liquid medium for metabolite production) Organisms: All Actinomycetes Trace element solution 5314 Name: Trace element solution 5314; 5314 Composition CaCl2 x H2O 3.0 g/l Fe-III-citrate 1.0 g/l MnSO4 0.2 g/l ZnCl2 0.1 g/l CuSO4 x 5 H2O 0.025 g/l Sodium tetra borate 0.2 g/l CoCl2 x 6 H2O 0.004 g/l Sodium molybdate 0.01 g/l Preparation: Use double destillated water. Sterilisation: 20 minutes at 121°C pH before sterilisation: Usage: Trace element solution for different media Organisms:
19586	ISP 4		Name: ISP 4; DSM 547 Solution I: Difco soluble starch, 10.0 g. Make a paste of the starch with a small amount of cold distilled water and bring to a volume of 500 ml. Solution II: CaCO3 2.0 g K2HPO4 (anhydrous) 1.0 g MgSO4 x 7 H2O 1.0 g NaCl 1.0 g (NH4)2SO4 2.0 g Distilled water 500.0 ml Trace salt solution (see below) 1.0 ml The pH should be between 7.0 and 7.4. Do not adjust if it is within this range. Mix solutions I and II together. Add 20.0 g agar. Liquify agar by steaming at 100°C for 10 to 20 min. Trace element solution: FeSO4 x 7 H2O 0.1 g MnCl2 x 4 H2O 0.1 g ZnSO4 x 7 H2O 0.1 g Distilled water 100.0 ml
19586	ISP 5		Name: ISP 5 (5323) Composition L-Asparagine 1.0 g/l Glycerol 10.0 g/l K2HPO4 1.0 g/l Salt solution (see preparation) 1.0 ml/l Agar 20.0 g/l Preparation: Salt solution 1.0 g FeSO4 x 7 H2O 1.0 g MnCl2 x 4 H2O 1.0 g ZNSO4 x 7 H2O in 100 ml water Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.2 Usage: Maintenance and taxonomy Organisms: All Actinomycetes
19586	ISP 6		Name: ISP 6 (5318) Composition Peptone 15.0 g/l Proteose peptose 5.0 g/l Ferric ammonium citrate 0.5 g/l Sodium glycerophosphate 1.0 g/l Sodium thiosulfate 0.08 g/l Yeast extract 1.0 g/l Agar 15.0 g/l Sterilisation: 20 minutes at 121°C pH before sterilisation: Usage: Production of melanoid pigments Organisms: All Actinomycetes
19586	ISP 7		Name: ISP 7 (5322) Composition Glycerol 15.0 g/l L-Tyrosine 0.5 g/l L-Asparagine 1.0 g/l K2HPO4 0.5 g/l NaCl 0.5 g/l FeSO4 x 7 H2O 0.01 g/l Trace element solution 5343 1.0 ml/l Agar 20.0 Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.3 Usage: Production of melanoid pigments Organisms: All Actinomycetes
11052	GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)	Medium recipe at MediaDive	Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water
11052	ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)	Medium recipe at MediaDive	Name: ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84) Composition: Agar 20.0 g/l Rolled oats 20.0 g/l ZnSO4 x 7 H2O 0.001 g/l MnCl2 x 4 H2O 0.001 g/l FeSO4 x 7 H2O 0.001 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
11052	positive	growth	28
19586	positive	optimum	28
67770	positive	growth	28
67771	positive	growth	28

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
67771	aerobe
125438	aerobe	90.105
125439	obligate aerobe	99.233

Spore formation

@ref	Spore formation	Confidence
125439		94.818
125438		92.317

Compound production

@ref	Compound
11052	kijanimycin
20216	Kijanimicin

Halophily

@ref	Salt	Growth	Tested relation	Concentration
19586	NaCl	positive	maximum	2.5 %

Observation

@ref	Observation
67770	quinones: MK-9(H₄), MK-9(H₂), MK-9(H₆), MK-9(H₄), MK-9(H₈)
67771	quinones: MK-9(H_4_), MK-9(H_2_)

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
19586	22599 ChEBI	arabinose	+
68368	29016 ChEBI	arginine	+	hydrolysis	from API 20E
19586	62968 ChEBI	cellulose	-
68368	16947 ChEBI	citrate	+	assimilation	from API 20E
19586	28757 ChEBI	fructose	+
68368	5291 ChEBI	gelatin	+	hydrolysis	from API 20E
19586	17234 ChEBI	glucose	+
68368	25094 ChEBI	lysine	+	degradation	from API 20E
19586	29864 ChEBI	mannitol	-
19586	17268 ChEBI	myo-inositol	+
68368	18257 ChEBI	ornithine	+	degradation	from API 20E
19586	16634 ChEBI	raffinose	-
19586	26546 ChEBI	rhamnose	+/-
19586	17992 ChEBI	sucrose	+
68368	27897 ChEBI	tryptophan	-	energy source	from API 20E
68368	16199 ChEBI	urea	+	hydrolysis	from API 20E
19586	18222 ChEBI	xylose	-

Metabolite production

@ref	Chebi-ID	Metabolite
68368	15688 ChEBI	acetoin	from API 20E
68368	16136 ChEBI	hydrogen sulfide	from API 20E
68368	35581 ChEBI	indole	from API 20E
67770		kijanimicin

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test	Indole test
68368	15688 ChEBI	acetoin	+		from API 20E
68368	35581 ChEBI	indole		-	from API 20E

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68382	alpha-chymotrypsin	+	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	+	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
68368	arginine dihydrolase	+	3.5.3.6	from API 20E
68382	beta-galactosidase	+	3.2.1.23	from API zym
68368	beta-galactosidase	+	3.2.1.23	from API 20E
68382	beta-glucosidase	+	3.2.1.21	from API zym
68382	beta-glucuronidase	-	3.2.1.31	from API zym
68382	cystine arylamidase	+	3.4.11.3	from API zym
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
68368	gelatinase	+		from API 20E
68382	leucine arylamidase	+	3.4.11.1	from API zym
68382	lipase (C 14)	+		from API zym
68368	lysine decarboxylase	+	4.1.1.18	from API 20E
68382	N-acetyl-beta-glucosaminidase	+	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
68368	ornithine decarboxylase	+	4.1.1.17	from API 20E
68382	trypsin	+	3.4.21.4	from API zym
68368	tryptophan deaminase	-	4.1.99.1	from API 20E
68368	urease	+	3.5.1.5	from API 20E
68382	valine arylamidase	+		from API zym

API 20E

@ref	ONPG	ADH (Arg)	LDC (Lys)	ODC	CIT	H2S productionH2S	URE	TDA (Trp)	IND	Acetoin production (Voges Proskauer test)VP	GEL	GLU	MAN	INO	Sor	RHA	SAC	MEL	AMY	ARA	OX	Nitrite productionNO2	Reduction to N2N2	MotilityMOB	Growth on MacConkey mediumMAC	OF-O	OF-F
19586	+	+	+	+	+	-	+	-	-	+	+	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
19586	not determinedn.d.	+	+	+	+	+	+	+	+	+	+	+	-	+	-	+	+	+	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Terrestrial	#Soil

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
11052	soil	Kenya	Kenya	KEN	Africa
67770	Soil		Kenya	KEN	Africa
67771	From soil		Kenya	KEN	Africa

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
19586	1	Risk group (German classification) According to TRBA 466
11052	1	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	Actinomadura kijaniata ATCC 31588	complete			651717042	46161	96.78
67770	ASM155217v1 assembly for Actinomadura kijaniata NBRC 14229	contig	GCA_001552175	1220561.3	2731957573	1220561	2.33

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20218	A.kijaniata 16S rRNA gene	X97890	1448	46161
20218	Actinomadura kijaniata 16S rRNA gene	U49006	1409	46161
20218	Actinomadura kijaniata 16S-23S ribosomal RNA intergenic spacer region, partial sequence	AF134099	462	46161

GC content

@ref	GC-content (mol%)	Method
67771	69.7	thermal denaturation, midpoint method (Tm)
67770	73.2	genome sequence analysis

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM155217v1 assembly for Actinomadura kijaniata NBRC 14229
NCBI: GCA_001552175

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	99.23	no
125439	gram_stain	BacteriaNetⓘ	positive	99.59	no
125439	motility	BacteriaNetⓘ	no	94.78	no
125439	spore_formation	BacteriaNetⓘ	yes	94.82	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Actinomadura kijaniata NBRC 14229
PATRIC: 1220561.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	86.40	yes
125438	anaerobic	anaerobicⓘ	no	95.67	no
125438	spore-forming	spore-formingⓘ	yes	92.32	no
125438	aerobic	aerobicⓘ	yes	90.11	yes
125438	thermophilic	thermophileⓘ	no	96.01	yes
125438	flagellated	motile2+ⓘ	no	86.00	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Enzymology	Structural studies on KijD1, a sugar C-3'-methyltransferase.	Dow GT, Thoden JB, Holden HM.	Protein Sci	10.1002/pro.3034	2016
Metabolism	Elucidation of the kijanimicin gene cluster: insights into the biosynthesis of spirotetronate antibiotics and nitrosugars.	Zhang H, White-Phillip JA, Melancon CE, Kwon HJ, Yu WL, Liu HW.	J Am Chem Soc	10.1021/ja0744854	2007
Metabolism	Large-scale production of coenzyme F420-5,6 by using Mycobacterium smegmatis.	Isabelle D, Simpson DR, Daniels L.	Appl Environ Microbiol	10.1128/aem.68.11.5750-5755.2002	2002
Phylogeny	Distribution and phylogenetic analysis of family 19 chitinases in Actinobacteria.	Kawase T, Saito A, Sato T, Kanai R, Fujii T, Nikaidou N, Miyashita K, Watanabe T.	Appl Environ Microbiol	10.1128/aem.70.2.1135-1144.2004	2004
	Draft genome of Thermomonospora sp. CIT 1 (Thermomonosporaceae) and in silico evidence of its functional role in filter cake biomass deconstruction.	Omori WP, Pinheiro DG, Kishi LT, Fernandes CC, Fernandes GC, Gomes-Pepe ES, Pavani CD, Lemos EGM, Souza JAM.	Genet Mol Biol	10.1590/1678-4685-gmb-2017-0376	2019
	Actinomadura opuntiae Sp. Nov., Isolated from a Soil of Cactus and the Reclassification of Actinomadura namibiensis Wink Et Al. 2003 as a Later Heterotypic Synonym of Actinomadura kijaniata Horan and Brodsky 1982.	Lee SD, Yang HL, Kim IS.	Curr Microbiol	10.1007/s00284-025-04472-y	2025
Enzymology	Combined structural and functional investigation of a C-3''-ketoreductase involved in the biosynthesis of dTDP-L-digitoxose.	Kubiak RL, Holden HM.	Biochemistry	10.1021/bi200514b	2011
Metabolism	X-ray structure of kijd3, a key enzyme involved in the biosynthesis of D-kijanose.	Bruender NA, Thoden JB, Holden HM.	Biochemistry	10.1021/bi100318v	2010
Metabolism	Functional Characterization of the ycjQRS Gene Cluster from Escherichia coli: A Novel Pathway for the Transformation of d-Gulosides to d-Glucosides.	Mukherjee K, Huddleston JP, Narindoshvili T, Nemmara VV, Raushel FM.	Biochemistry	10.1021/acs.biochem.8b01278	2019
Enzymology	The molecular architecture of QdtA, a sugar 3,4-ketoisomerase from Thermoanaerobacterium thermosaccharolyticum.	Thoden JB, Holden HM.	Protein Sci	10.1002/pro.2451	2014
	Characterization of the dTDP-Fuc3N and dTDP-Qui3N biosynthetic pathways in Campylobacter jejuni 81116.	Li ZZ, Riegert AS, Goneau MF, Cunningham AM, Vinogradov E, Li J, Schoenhofen IC, Thoden JB, Holden HM, Gilbert M.	Glycobiology	10.1093/glycob/cww136	2017
Metabolism	Holo Structure and Steady State Kinetics of the Thiazolinyl Imine Reductases for Siderophore Biosynthesis.	Meneely KM, Ronnebaum TA, Riley AP, Prisinzano TE, Lamb AL.	Biochemistry	10.1021/acs.biochem.6b00735	2016
Metabolism	Two structures of a thiazolinyl imine reductase from Yersinia enterocolitica provide insight into catalysis and binding to the nonribosomal peptide synthetase module of HMWP1.	Meneely KM, Lamb AL.	Biochemistry	10.1021/bi3011016	2012
	Bacterial Sugar 3,4-Ketoisomerases: Structural Insight into Product Stereochemistry.	Thoden JB, Vinogradov E, Gilbert M, Salinger AJ, Holden HM.	Biochemistry	10.1021/acs.biochem.5b00541	2015
Phylogeny	Molecular-genetic and chemotaxonomic studies on Actinomadura and Nocardiopsis.	Fischer A, Kroppenstedt RM, Stackebrandt E.	J Gen Microbiol	10.1099/00221287-129-11-3433	1983
Metabolism	Biosynthetic gene cluster of cetoniacytone A, an unusual aminocyclitol from the endosymbiotic Bacterium Actinomyces sp. Lu 9419.	Wu X, Flatt PM, Xu H, Mahmud T.	Chembiochem	10.1002/cbic.200800527	2009
Metabolism	Cryptic indole hydroxylation by a non-canonical terpenoid cyclase parallels bacterial xenobiotic detoxification.	Kugel S, Baunach M, Baer P, Ishida-Ito M, Sundaram S, Xu Z, Groll M, Hertweck C.	Nat Commun	10.1038/ncomms15804	2017
Enzymology	Structural and biochemical characterization of a bifunctional ketoisomerase/N-acetyltransferase from Shewanella denitrificans.	Chantigian DP, Thoden JB, Holden HM.	Biochemistry	10.1021/bi401170t	2013
Enzymology	Stabilization of C4a-hydroperoxyflavin in a two-component flavin-dependent monooxygenase is achieved through interactions at flavin N5 and C4a atoms.	Thotsaporn K, Chenprakhon P, Sucharitakul J, Mattevi A, Chaiyen P.	J Biol Chem	10.1074/jbc.m111.241836	2011
	Enzymatic synthesis of TDP-deoxysugars.	White-Phillip J, Thibodeaux CJ, Liu HW.	Methods Enzymol	10.1016/s0076-6879(09)04621-7	2009
Genetics	Genome-Based Taxonomic Classification of the Phylum Actinobacteria.	Nouioui I, Carro L, Garcia-Lopez M, Meier-Kolthoff JP, Woyke T, Kyrpides NC, Pukall R, Klenk HP, Goodfellow M, Goker M.	Front Microbiol	10.3389/fmicb.2018.02007	2018
Phylogeny	Kijanimicin (Sch 25663), a novel antibiotic produced by Actinomadura kijaniata SCC 1256. Fermentation, isolation, characterization and biological properties.	Waitz JA, Horan AC, Kalyanpur M, Lee BK, Loebenberg D, Marquez JA, Miller G, Patel MG	J Antibiot (Tokyo)	10.7164/antibiotics.34.1101	1981
Phylogeny	Actinomadura namibiensis sp. nov.	Wink J, Kroppenstedt RM, Seibert G, Stackebrandt E	Int J Syst Evol Microbiol	10.1099/ijs.0.02286-0	2003
Phylogeny	Actinomadura parmotrematis sp. nov., isolated from the foliose lichen, Parmotrema praesorediosum (Nyl.) Hale.	Somphong A, Poengsungnoen V, Buaruang K, Suriyachadkun C, Sripreechasak P, Tanasupawat S, Phongsopitanun W	Int J Syst Evol Microbiol	10.1099/ijsem.0.005447	2022

References

#11052	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 43764
#19586	Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig .
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20216	Curators of the JMRC: Jena Microbial Resource Collection (JMRC):
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#67771	Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;
#68368	Automatically annotated from API 20E .
#68382	Automatically annotated from API zym .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Actinomadura kijaniata (DSM 43764, ATCC 31588, CCRC 13146)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Multicellular morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Compound production

Halophily

Observation

Metabolite utilization

Metabolite production

Metabolite tests

Enzymes

API 20E

API zym

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_001552175

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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