Name: Actinomadura fulvescens DSM 43923
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 16928

Type strain:

Species: Actinomadura fulvescens

Culture col. no.: DSM 43923, IFO 14347, IMET 9745, INA 3321, JCM 6833, NBRC 14347, NCTC B-16245, IMSNU 20005, KCTC 9339, MTCC 1381, NRRL B-16245, VKM Ac-938

Strain history: IFO 14347 <-- INA 3321.

NCBI tax ID(s): 46160 (species)

SI-ID 50457

DSM 43923, IFO 14347, IMET 9745, JCM 6833, NRRL B-16245, VKM Ac-938, KCTC 9339, NBRC 14347

Other strains from Actinomadura fulvescens

A. fulvescens STH00382(ZIMET), HKI 0382, VKM ...
A. fulvescens STH00399(ZIMET), HKI 0399
A. fulvescens STH00416(ZIMET), HKI 0416, VKM ...
A. fulvescens STH00415(ZIMET), HKI 0415

Section

Actinomadura fulvescens DSM 43923 is a thermophilic bacterium that was isolated from Soil.

thermophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Streptosporangiales*
	Family	*Thermomonosporaceae*
	Genus	*Actinomadura*
	Species	**Actinomadura fulvescens**
	Full Scientific Name (LPSN)	Actinomadura fulvescens Terekhova et al. 1987

Information on morphological and physiological properties Morphology

[Ref.: #19617]	Colony color	Maize yellow
[Ref.: #19617]	Incubation period	10-14 days
[Ref.: #19617]	Cultivation medium used	ISP 2

[Ref.: #19617]	Colony color	Maize yellow
[Ref.: #19617]	Incubation period	10-14 days
[Ref.: #19617]	Cultivation medium used	ISP 3

[Ref.: #19617]	Colony color	Beige
[Ref.: #19617]	Incubation period	10-14 days
[Ref.: #19617]	Cultivation medium used	ISP 7

[Ref.: #19617]	Incubation period	10-14 days
[Ref.: #19617]	Cultivation medium used	ISP 4

[Ref.: #19617]	Incubation period	10-14 days
[Ref.: #19617]	Cultivation medium used	ISP 5

[Ref.: #19617]	Incubation period	10-14 days
[Ref.: #19617]	Cultivation medium used	ISP 6

[Ref.: #19617]	Multicellular complex forming ability	no
[Ref.: #19617]	Medium Name (multicellularity)	ISP 2

[Ref.: #19617]	Multicellular complex forming ability	no
[Ref.: #19617]	Medium Name (multicellularity)	ISP 3

[Ref.: #19617]	Multicellular complex forming ability	no
[Ref.: #19617]	Medium Name (multicellularity)	ISP 4

[Ref.: #19617]	Multicellular complex forming ability	no
[Ref.: #19617]	Medium Name (multicellularity)	ISP 5

[Ref.: #19617]	Multicellular complex forming ability	no
[Ref.: #19617]	Medium Name (multicellularity)	ISP 6

[Ref.: #19617]	Multicellular complex forming ability	no
[Ref.: #19617]	Medium Name (multicellularity)	ISP 7

Information on culture and growth conditions Culture and growth conditions

[Ref.: #19617]

Culture medium

ISP 2

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Culture medium growth

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Culture medium composition

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Culture medium

ISP 3

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Culture medium growth

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Culture medium composition

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Culture medium

ISP 4

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Culture medium growth

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Culture medium composition

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Culture medium

ISP 5

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Culture medium growth

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Culture medium composition

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Culture medium

ISP 6

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Culture medium growth

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Culture medium composition

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Culture medium

ISP 7

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Culture medium growth

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Culture medium composition

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Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

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Culture medium growth

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Culture medium link

Medium recipe at MediaDive

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Culture medium composition

expand / minimize

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Culture medium

GPHF-MEDIUM (DSMZ Medium 553)

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Culture medium growth

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Culture medium link

Medium recipe provided by DSMZ

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Culture medium

N-Z-AMINE-MEDIUM (DSMZ Medium 554)

[Ref.: #11272]

Culture medium growth

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Culture medium link

Medium recipe provided by DSMZ

		Temperature
[Ref.: #11272]	growth	28 °C
[Ref.: #19617]	maximum	40 °C
[Ref.: #19617]	minimum	20 °C
[Ref.: #19617]	optimum	37 °C
[Ref.: #67770]	growth	28 °C

[Ref.: #11272]	Temperature range	mesophilic
[Ref.: #19617]	Temperature range	thermophilic
[Ref.: #19617]	Temperature range	psychrophilic
[Ref.: #19617]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #19617]		NaCl		growth	0	%

[Ref.: #67770]

Observation

quinones: MK-9(H₆), MK-9(H₄), MK-9(H₈)

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #19617]	arabinose ChEBI	-
[Ref.: #68368]	arginine ChEBI	+	hydrolysis	* from API 20E
[Ref.: #19617]	cellulose ChEBI	-
[Ref.: #68368]	citrate ChEBI	+	assimilation	* from API 20E
[Ref.: #19617]	fructose ChEBI	-
[Ref.: #68368]	gelatin ChEBI	+	hydrolysis	* from API 20E
[Ref.: #19617]	glucose ChEBI	+
[Ref.: #68368]	lysine ChEBI	+	degradation	* from API 20E
[Ref.: #19617]	mannitol ChEBI	-
[Ref.: #19617]	myo-inositol ChEBI	-
[Ref.: #68368]	ornithine ChEBI	+	degradation	* from API 20E
[Ref.: #19617]	raffinose ChEBI	-
[Ref.: #19617]	rhamnose ChEBI	-
[Ref.: #19617]	sucrose ChEBI	-
[Ref.: #68368]	tryptophan ChEBI	-	energy source	* from API 20E
[Ref.: #68368]	urea ChEBI	+	hydrolysis	* from API 20E
[Ref.: #19617]	xylose ChEBI	-
	Only first 10 entries are displayed. Click here to see all.

	Metabolite	Production
[Ref.: #68368]	acetoin ChEBI	yes	* from API 20E
[Ref.: #68368]	hydrogen sulfide ChEBI	no	* from API 20E
[Ref.: #68368]	indole ChEBI	no	* from API 20E

	Physiological tests	Metabolite	Voges-Proskauer-test	Indole test
[Ref.: #68368]		acetoin ChEBI	+		* from API 20E
[Ref.: #68368]		indole ChEBI		-	* from API 20E

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #68382]	alkaline phosphatase	+	3.1.3.1	* from API zym
[Ref.: #68382]	alpha-chymotrypsin	+	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	-	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	+	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #68368]	arginine dihydrolase	+	3.5.3.6	* from API 20E
[Ref.: #68368]	beta-galactosidase	+	3.2.1.23	* from API 20E, API zym
[Ref.: #68382]	beta-glucosidase	+	3.2.1.21	* from API zym
[Ref.: #68382]	beta-glucuronidase	-	3.2.1.31	* from API zym
[Ref.: #68382]	cystine arylamidase	+	3.4.11.3	* from API zym
[Ref.: #68382]	esterase (C 4)	+		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	+		* from API zym
[Ref.: #68368]	gelatinase	+		* from API 20E
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #68368]	lysine decarboxylase	+	4.1.1.18	* from API 20E
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	+	3.2.1.52	* from API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #68368]	ornithine decarboxylase	+	4.1.1.17	* from API 20E
[Ref.: #68382]	trypsin	+	3.4.21.4	* from API zym
[Ref.: #68368]	tryptophan deaminase	-	4.1.99.1	* from API 20E
[Ref.: #68368]	urease	+	3.5.1.5	* from API 20E
[Ref.: #68382]	valine arylamidase	+		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® 20E:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	beta-GalactosidaseONPG	Arginine dihydrolaseADH (Arg)	Lysine decarboxylaseLDC (Lys)	Ornithine decarboxylaseODC	Citrate utilizationCIT	H2S productionH2S	Urease/urea hydrolysisURE	Tryptophan deaminaseTDA (Trp)	Indole productionIND	Acetoin production (Voges Proskauer test)VP	Gelatinase/gelatin hydrolysisGEL	Fermentation/oxidation of D-glucoseGLU	Fermentation/oxidation of D-mannitolMAN	Fermentation/oxidation of inositolINO	Fermentation/oxidation of sorbitolSor	Fermentation/oxidation of L-rhamnoseRHA	Fermentation/oxidation of sucroseSAC	Fermentation/oxidation of melibioseMEL	Fermentation/oxidation of amygdalinAMY	Fermentation/oxidation of L-arabinoseARA	Cytochrome oxidaseOX	Nitrite productionNO2	Reduction to N2N2	MotilityMOB	Growth on MacConkey mediumMAC	Oxidative catabolisation of D-glucoseOF-O	Fermentation of D-glucoseOF-F
[Ref.: #19617]	460	+	+	+	+	+	-	+	-	-	+	+	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #19617]	447	not determinedn.d.	+	+	+	-	+	+	+	+	+	+	+	-	+	-	+	+	+	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Soil
[Ref.: #67770]	Country	Turkmenistan
[Ref.: #67770]	Country ISO 3 Code	TKM
[Ref.: #67770]	Continent	Asia
* marker position based on {}

[Ref.: #69479]

Global distribution of 16S sequence AJ420137 (>99% sequence identity) for Actinomadura fulvescens subclade from Microbeatlas

Aquatic Samples	1
Soil Samples	22
Animal Samples	2
Plant Samples	11
Total Samples	36

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #19617]	Biosafety level	1	Risk group (German classification)
[Ref.: #11272]	Biosafety level	1	Risk group (German classification) According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Actinomadura fulvescens 16S rRNA gene, strain DSM 43923T	AJ420137	1455	ENA	46160 tax ID	*
[Ref.: #20218]	Actinomadura fulvescens 16S-23S ribosomal RNA intergenic spacer region, partial sequence	AF134097	417	ENA	46160 tax ID	*
[Ref.: #20218]	Actinomadura fulvescens 16S rRNA gene	U49005	1415	ENA	46160 tax ID	*

Availability in culture collections External links

[Ref.: #11272]

Culture collection no.

DSM 43923, IFO 14347, IMET 9745, INA 3321, JCM 6833, NBRC 14347, NCTC B-16245, IMSNU 20005, KCTC 9339, MTCC 1381, NRRL B-16245, VKM Ac-938

[Ref.: #85933]

SI-ID 50457

Literature:

Topic	Title	Authors	Journal	DOI	Year
Metabolism	[Antibiotics formed by Actinomadura fulvescens].	Zbarskii VB, Galatenko OA, Terekhova LP, Ol'khovatova OL, Malkina ND	Antibiot Khimioter		1989	*
Phylogeny	[New species, Actinomadura fulvescens sp. nov. and Actinomadura turkmeniaca sp. nov. and their antagonistic properties].	Terekhova LP, Galatenko OA, Preobrazhenskaia TP	Antibiotiki		1982	*

References

#11272

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 43923

#19617

Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig .

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68368

Automatically annotated from API 20E .

#68382

Automatically annotated from API zym .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#85933

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID50457.1 )

* These data were automatically processed and therefore are not curated

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