Name: Thermococcus piezophilus CDGS
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 168876

Type strain:

Species: Thermococcus piezophilus

Strain Designation: CDGS

Culture col. no.: UBOCC 3296, ATCC TSD-33

NCBI tax ID(s): 1712654 (species)

Thermococcus piezophilus CDGS is an archaeon of the family Thermococcaceae.

16S sequence
Archaea
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Archaea"
	Phylum	*Methanobacteriota*
	Class	*Thermococci*
	Order	*Thermococcales*
	Family	*Thermococcaceae*
	Genus	*Thermococcus*
	Species	**Thermococcus piezophilus**
	Full Scientific Name (LPSN)	Thermococcus piezophilus Dalmasso et al. 2017

Synonym

"Thermococcus superprofundus"

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #20215]

Biosafety level

Risk group

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20215]	Thermococcus piezophilus partial 16S rRNA gene, type strain CDGST	LN878294	1314	ENA	1712654 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Thermococcus piezophilus CDGS	GCA_001647085	complete	GenBank	1712654 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Thermococcus piezophilus CDGS NCBI: GCA_001647085.1
[Ref.: #69480]	flagellated	no	94.756	no
[Ref.: #69480]	gram-positive	no	97.181	no
[Ref.: #69480]	anaerobic	yes	99.203	no
[Ref.: #69480]	halophile	no	79.477	no
[Ref.: #69480]	spore-forming	no	96.135	no
[Ref.: #69480]	glucose-util	yes	74.706	no
[Ref.: #69480]	motile	no	78.012	no
[Ref.: #69480]	aerobic	no	97.858	no
[Ref.: #69480]	glucose-ferment	no	55.207	no
[Ref.: #69480]	thermophile	yes	100	no

Availability in culture collections External links

[Ref.: #20215]

Culture collection no.

UBOCC 3296, ATCC TSD-33

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Thermococcus piezophilus sp. nov., a novel hyperthermophilic and piezophilic archaeon with a broad pressure range for growth, isolated from a deepest hydrothermal vent at the Mid-Cayman Rise.	Dalmasso C, Oger P, Selva G, Courtine D, L'Haridon S, Garlaschelli A, Roussel E, Miyazaki J, Reveillaud J, Jebbar M, Takai K, Maignien L, Alain K	Syst Appl Microbiol	10.1016/j.syapm.2016.08.003	2016	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

* These data were automatically processed and therefore are not curated

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