Name: Thermococcus barossii SHCK-94
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 16887

Type strain:

Species: Thermococcus barossii

Strain Designation: SHCK-94

Culture col. no.: DSM 17882, ATCC BAA 1085, JCM 12858, DSM 9535

Strain history: E. V. Pikuta SHCK-94 <-- R. M. Kelly.

NCBI tax ID(s): 54077 (species)

Section

Thermococcus barossii SHCK-94 is a hyperthermophilic archaeon that was isolated from Rock fragments of a hydrothermal vent flange formation.

hyperthermophilic
16S sequence
Archaea
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	25-08-2022 (DD-MM-YYYY)
	Domain	Archaea
	Phylum	Euryarchaeota
	Class	Thermococci
	Order	Thermococcales
	Family	Thermococcaceae
	Genus	Thermococcus
	Species	Thermococcus barossii
	Full Scientific Name (PNU)	Thermococcus barossii Duffaud et al. 2005

Information on culture and growth conditions Culture and growth conditions

[Ref.: #7215]

Culture medium

MARINE THERMOCOCCUS MEDIUM (DSMZ Medium 760)

[Ref.: #7215]

Culture medium growth

[Ref.: #7215]

Culture medium link

Medium recipe at MediaDive

[Ref.: #7215]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #7215]			growth	80 °C
[Ref.: #67770]			growth	82 °C

[Ref.: #7215]	Temperature range	hyperthermophilic
[Ref.: #67770]	Temperature range	hyperthermophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #7215]	Sample type/isolated from	Rock fragments of a hydrothermal vent flange formation
[Ref.: #7215]	Geographic location (country and/or sea, region)	northeast Pacific Ocean, East Pacific Rise of the Juan de Fuca Ridge

[Ref.: #67770]	Sample type/isolated from	Rock fragments of a hydrothermal vent flange formation, located along the East Pacific Rise of the Juan de Fuca Ridge

Isolation sources categories

#Environmental	#Aquatic	#Hydrothermal vent
#Environmental	#Terrestrial	#Geologic
#Condition	#Thermophilic (>45°C)	-

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #7215]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #7215]	Thermococcus barossii 16S ribosomal RNA gene, partial sequence	U76535	1428	ENA	54077 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Thermococcus barossii SHCK-94	GCA_002214465	complete	GenBank	54077 tax ID	*
[Ref.: #66792]	Thermococcus barossii SHCK-94	2758568026	complete	JGI IMG/M	54077 tax ID	*
[Ref.: #67770]	Thermococcus barossii strain SHCK-94, complete genome	CP015101		ENA	54077 tax ID

[Ref.: #7215]	GC-content	60.0 mol%	high performance liquid chromatography (HPLC)
[Ref.: #67770]	GC-content	60 mol%	high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #7215]

Culture collection no.

DSM 17882, ATCC BAA 1085, JCM 12858, DSM 9535

[Ref.: #20218]

Associated Passport(s) in StrainInfo

692228, 386640, 386641

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Thermococcus piezophilus sp. nov., a novel hyperthermophilic and piezophilic archaeon with a broad pressure range for growth, isolated from a deepest hydrothermal vent at the Mid-Cayman Rise.	Dalmasso C, Oger P, Selva G, Courtine D, L'Haridon S, Garlaschelli A, Roussel E, Miyazaki J, Reveillaud J, Jebbar M, Takai K, Maignien L, Alain K	Syst Appl Microbiol	10.1016/j.syapm.2016.08.003	2016	*

References

#7215

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 17882

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;
* These data were automatically processed and therefore are not curated

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