Acholeplasma granularum NBRC 14847 is an animal pathogen of the family Acholeplasmataceae.
animal pathogen genome sequence 16S sequence Bacteria| @ref 20215 |
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| Domain Bacteria |
| Phylum Mycoplasmatota |
| Class Mollicutes |
| Order Acholeplasmatales |
| Family Acholeplasmataceae |
| Genus Acholeplasma |
| Species Acholeplasma granularum |
| Full scientific name Acholeplasma granularum (Switzer 1964) Edward and Freundt 1970 (Approved Lists 1980) |
| Synonyms (1) |
Global distribution of 16S sequence AY538166 (>99% sequence identity) for Acholeplasma granularum subclade from Microbeatlas ![]()
| @ref | Pathogenicity animal | Biosafety level | Biosafety level comment | |
|---|---|---|---|---|
| 20215 | 2 | Risk group |
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 66792 | ASM52623v1 assembly for Acholeplasma granularum ATCC 19168 | contig | 1278304 | 74.85 |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 20215 | Acholeplasma granularum 16S ribosomal RNA gene, partial sequence | AY538166 | 1409 | 264635 | ||
| 124043 | Acholeplasma granularum 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence. | AY786572 | 770 | 264635 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | spore_formation | BacteriaNetⓘ | no | 93.48 | no |
| 125439 | motility | BacteriaNetⓘ | yes | 49.02 | no |
| 125439 | gram_stain | BacteriaNetⓘ | negative | 93.63 | no |
| 125439 | oxygen_tolerance | BacteriaNetⓘ | facultative anaerobe | 98.04 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | yes | 66.71 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 73.51 | no |
| 125438 | spore-forming | spore-formingⓘ | no | 83.46 | no |
| 125438 | aerobic | aerobicⓘ | no | 92.91 | no |
| 125438 | thermophilic | thermophileⓘ | no | 94.62 | no |
| 125438 | flagellated | motile2+ⓘ | no | 91.50 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Pathogenicity | Antimicrobial activities of 81.723 hfu, a new pleuromutilin derivative. | Drews J, Georgopoulos A, Laber G, Schutze E, Unger J. | Antimicrob Agents Chemother | 10.1128/aac.7.5.507 | 1975 | |
| Flat gel polyacrylamide electrophoresis of porcine mycoplasmas. | Wreghitt TG, Windsor GD, Butler M. | Appl Microbiol | 10.1128/am.28.4.530-533.1974 | 1974 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta . |
| #124043 | Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy . |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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