Name: Thermococcus acidaminovorans AED II 10
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 16870

Type strain:

Species: Thermococcus acidaminovorans

Strain Designation: AED II 10

Culture col. no.: DSM 11906, JCM 12186

Strain history: <- R. Dirmeier and K. O. Stetter; AED II 10

NCBI tax ID(s): 71280 (species)

SI-ID 101003

DSM 11906, JCM 12186

Special Collections

DSMZ
JCM

Section

Thermococcus acidaminovorans AED II 10 is an anaerobe archaeon that was isolated from shallow beach .

anaerobe
16S sequence
Archaea

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Archaea"
	Phylum	*Methanobacteriota*
	Class	*Thermococci*
	Order	*Thermococcales*
	Family	*Thermococcaceae*
	Genus	*Thermococcus*
	Species	**Thermococcus acidaminovorans**
	Full Scientific Name (LPSN)	Thermococcus acidaminovorans Dirmeier et al. 2001

Information on culture and growth conditions Culture and growth conditions

[Ref.: #4534]

Culture medium

ALKALIPHILIC THERMOCOCCUS MEDIUM (DSMZ Medium 926)

[Ref.: #4534]

Culture medium growth

[Ref.: #4534]

Culture medium link

Medium recipe at MediaDive

[Ref.: #4534]

Culture medium composition

expand / minimize

[Ref.: #4534]

Culture medium

MARINE THERMOCOCCUS MEDIUM (DSMZ Medium 760)

[Ref.: #4534]

Culture medium growth

[Ref.: #4534]

Culture medium link

Medium recipe at MediaDive

[Ref.: #4534]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #4534]			growth	85 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #4534]

Oxygen tolerance

anaerobe

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #4534]	Sample type/isolated from	shallow beach (depth 1.0 m)
[Ref.: #4534]	Geographic location (country and/or sea, region)	Vulcano Island, porto di Levante
[Ref.: #4534]	Country	Italy
[Ref.: #4534]	Country ISO 3 Code	ITA
[Ref.: #4534]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Environmental

#Terrestrial

#Coast

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AJ291807 (>99% sequence identity) for Thermococcus from Microbeatlas

Aquatic Samples	4
Soil Samples
Animal Samples
Plant Samples
Total Samples	4

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #4534]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Thermococcus acidaminovorans 16S rRNA gene	Y15935	1427	GenBank ENA	71280 tax ID	*
[Ref.: #20218]	Thermococcus acidaminovorans gene for 16S rRNA, partial sequence, strain:DSM 11906	AB055120	1426	GenBank ENA	71280 tax ID	*
[Ref.: #20218]	Thermococcus acidaminovorans 16S rRNA gene, strain DSM 11906	AJ291807	1317	GenBank ENA	71280 tax ID	*
[Ref.: #20218]	Thermococcus acidaminovorans strain DSM 11906 16S ribosomal RNA gene, partial sequence	AY099170	1384	GenBank ENA	71280 tax ID	*
[Ref.: #20218]	Thermococcus acidaminovorans strain DSM 11906 16S-23S ribosomal RNA intergenic spacer region, complete sequence	AY099206	182	GenBank ENA	71280 tax ID	*

[Ref.: #4534]

GC-content

49 mol%

Availability in culture collections External links

[Ref.: #4534]

Culture collection no.

DSM 11906, JCM 12186

[Ref.: #85878]

SI-ID 101003

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Thermococcus acidaminovorans sp. nov., a new hyperthermophilic alkalophilic archaeon growing on amino acids.	Dirmeier R, Keller M, Hafenbradl D, Braun FJ, Rachel R, Burggraf S, Stetter KO	Extremophiles	10.1007/s007920050049	1998	*

References

#4534

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 11906

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#85878

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID101003.1 )

* These data were automatically processed and therefore are not curated

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