Rhodopseudomonas palustris (ATCC 17001, Pa16, BCRC 16408)

Name: Rhodopseudomonas palustris (ATCC 17001, Pa16, BCRC 16408)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 168493

Type strain

Strain Designation Pa16, 2.1.6, ATH 2.1.6

Culture col. no. ATCC 17001 Pa16 BCRC 16408 2.1.6 ATH 2.1.6 5 more

NCBI tax ID(s) 74570 1076

Special Collections CIP

Links

Rhodopseudomonas palustris Pa16 is a mesophilic, Gram-negative, motile prokaryote of the family Nitrobacteraceae.

Gram-negative motile rod-shaped mesophilic 16S sequence

Name and taxonomic classification

SI-ID 12655

LMG 18881,ATCC 17001,DSM 123,ATCC 11168,NCIB 8252,NCIB 8288,NCIB 11692,CIP 103513,NCIMB 8288,NCIMB 8252,NBRC 100419,BCRC 16408,CCRC 16408,NRRL B-4276,NCIMB 11692,VKM B-1620

@ref 20215

Last LPSN update 2025-12-16 10:10:21

Domain Pseudomonadati

Phylum Pseudomonadota

Class Alphaproteobacteria

Order Hyphomicrobiales

Family Nitrobacteraceae

Genus Rhodopseudomonas

Species Rhodopseudomonas palustris

Full scientific name Rhodopseudomonas palustris (Molisch 1907) van Niel 1944 (Approved Lists 1980)

Synonyms (2)

Rhodopseudomonas rutila
"Rhodobacillus palustris"

BacDive ID	Other strains from **Rhodopseudomonas palustris** (6)	Type strain
1819	R. palustris 7850, DSM 127, Pfennig 7850
1821	R. palustris Klemme S1, S-1, DSM 131
1822	R. palustris R1, DSM 8283, ATCC 33872, DSM 5869, JCM 2524, ...
100656	R. palustris SF000326(FSU),
100657	R. palustris SF000717(FSU),
169288	R. palustris 1850, DSM 126, Pfennig 1850

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Motility
121519	negative	rod-shaped

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link
121519	CIP Medium 69		Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
121519	positive	growth	30	mesophilic
121519	negative	growth	10
121519	negative	growth	41

Physiology and metabolism

Halophily

@ref	Salt	Growth	Tested relation	Concentration
121519	NaCl	positive	growth	0 %
121519	NaCl		growth	2 %
121519	NaCl		growth	4 %
121519	NaCl		growth	6 %

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
121519	16947 ChEBI	citrate	-	carbon source
121519	4853 ChEBI	esculin	-	hydrolysis
121519	15792 ChEBI	malonate	-	assimilation
121519	17632 ChEBI	nitrate	-	reduction
121519	16301 ChEBI	nitrite	-	reduction

Metabolite production

@ref	Chebi-ID	Metabolite	Production
121519	35581 ChEBI	indole

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
121519	alcohol dehydrogenase	-	1.1.1.1
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	-	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
121519	amylase	+
68382	beta-galactosidase	-	3.2.1.23	from API zym
121519	beta-galactosidase	-	3.2.1.23
68382	beta-glucosidase	-	3.2.1.21	from API zym
68382	beta-glucuronidase	-	3.2.1.31	from API zym
121519	catalase	+	1.11.1.6
68382	cystine arylamidase	+	3.4.11.3	from API zym
121519	DNase	-
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
121519	gelatinase	-
68382	leucine arylamidase	+	3.4.11.1	from API zym
68382	lipase (C 14)	-		from API zym
121519	lysine decarboxylase	-	4.1.1.18
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	-		from API zym
121519	ornithine decarboxylase	-	4.1.1.17
121519	oxidase	+
68382	trypsin	+	3.4.21.4	from API zym
121519	tween esterase	+
121519	urease	+	3.5.1.5
68382	valine arylamidase	-		from API zym

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
121519	-	+	+	+	-	+	-	+	+	-	+	-	-	-	-	-	-	-	-	-

API biotype100

@ref	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
121519	not determinedn.d.	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	+	+	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-

Isolation, sampling and environmental information

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
20215	1	Risk group
121519	1	Risk group (French classification)

Sequence information

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20215	Rhodopseudomonas palustris 16S rRNA, partial sequence	D12700	1319	1076
124043	Rhodopseudomonas palustris gene for 16S rRNA, partial sequence, strain: ATCC 17001.	AB498815	1484	1076
124043	Rhodopseudomonas palustris 16S rRNA, 16S-23S ribosomal RNA intergeic spacer, tRNA-Ile, tRNA-Ala, 23S rRNA, partial and complete sequence, strain: ATCC 17001.	AB498825	954	1076
124043	Rhodopseudomonas palustris T 16S ribosomal RNA gene, partial sequence.	AF123087	1438	1076
124043	Rhodopseudomonas palustris strain NCIMB8252 16S ribosomal RNA gene, partial sequence.	AF416662	1256	1076
124043	Rhodopseudomonas palustris gene for 16S rRNA.	D25312	1412	1076

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
	Optimized light supply strategy comprehensively increases the synthesis of high-value cell inclusions in Rhodopseudomonas palustris using food waste fermentation broth: Process optimization and biosynthetic mechanism.	Sun Y, Sun Y, Liu M, Ren X, Bai G, Jiang F.	Bioresour Technol	10.1016/j.biortech.2025.133268	2025
	Untangling metabolic interactions of a nongrowing, hydrogen producing synthetic coculture through a multispecies metabolic flux analysis.	Morales-Mendivelso DF, Garcia-Pena EI, Aranda-Barradas JS, Gonzalez-Garcia RA, Salgado-Manjarrez E.	Bioresour Technol	10.1016/j.biortech.2025.133275	2026
	Enhanced photo-fermentative hydrogen production in photosynthetic bacteria via nano-Fe₃O₄-improved photosynthetic electron transfer efficiency.	Sun C, Wang J, Yu Q, Zhao Z, Zhang Y.	Environ Res	10.1016/j.envres.2025.123023	2025
	Structure and effective brightness of near-infrared fluorescent protein iRFP713/C15S/V254C complexed with phycocyanobilin.	Remeeva AA, Stepanenko OV, Silonov SA, Kuzmin AS, Kovalev KV, Stepanenko OV, Gavrilova AA, Smirnov EY, Kuznetsova IM, Turoverov KK, Gushchin IY, Fonin AV.	FEBS J	10.1111/febs.70220	2025
	The effects of Rhodopseudomonas palustris on the improvement of agronomic traits and key enzyme-coding genes related to polysaccharide biosynthesis in Codonopsis pilosula.	Wang W, Gao S, Sun Y, Yang H, Li J, Li J, Zheng X, Yang G.	PLoS One	10.1371/journal.pone.0319989	2025
	Tumour-resident oncolytic bacteria trigger potent anticancer effects through selective intratumoural thrombosis and necrosis.	Iwata S, Nishiyama T, Sakari M, Doi Y, Takaya N, Ogitani Y, Nagano H, Fukuchi K, Miyako E.	Nat Biomed Eng	10.1038/s41551-025-01459-9	2025
	Zero-valent iron as an alternative electron donor for extracellular electron uptake linked to CO₂ fixation in Rhodopseudomonas palustris.	Lu Z, Shen Y, Guan X.	Bioresour Technol	10.1016/j.biortech.2025.132330	2025
Transcriptome	Integrated Microbiome, Transcriptome, and Physiology Analyses Reveal the Response Of Kuruma Shrimp (Penaeus japonicus) to Oxygen Nanobubble Exposure.	Chen Y, Zhang R, Zhang Y, Guo J, Guo Z, Han Y, Wang F, Zhao X, Ren T.	Mar Biotechnol (NY)	10.1007/s10126-025-10464-7	2025
	Dinitrogen fixation by open purple non-sulfur bacteria cultures for protein production: Diazotrophy boosts photoheterotrophic uptake rates.	Rosario Rodero MD, Steyer JP, Perez-Bernal MF, Verstraete W, Escudie R, Capson-Tojo G.	Bioresour Technol	10.1016/j.biortech.2025.132554	2025
	Influence of inorganic carbon on purple phototrophic bacteria polyhydroxyalkanoates production under high reductive stress environment.	Almeida JR, Miranda Reis MA, Fradinho JC.	Bioresour Technol	10.1016/j.biortech.2025.132462	2025
Enzymology	Application of R. Palustris in simulated wastewater purification and the degradation mechanism of crystal violet.	Lv Y, Zhang Y, Zhang X, Chu J, Huang Y.	Arch Microbiol	10.1007/s00203-025-04304-4	2025
	One-step transformation of CO₂ to methane by Escherichia coli with a synthetic biomethanation module.	Wen ZP, Sha C, Nawab S, Lu ZJ, Yong YC.	Biochem Biophys Res Commun	10.1016/j.bbrc.2024.151284	2025
	Effects of Rhodopseudomonas palustris and composite probiotics on growth performance, intestinal health, and non-specific immunity of sea urchin (Strongylocentrotus intermedius).	Zhang Y, Zhang R, Guo Z, Chen Y, Meng X, Han Y, Zhao X, Ren T.	Comp Biochem Physiol B Biochem Mol Biol	10.1016/j.cbpb.2024.111058	2025
	Study on confined interface electron enhanced ethanol to hydrogen conversion by Rhodopseudomonas palustris.	Tao Z, Li B, Lin S, Li S, Li L, Huang X.	Chem Commun (Camb)	10.1039/d4cc03553d	2024
	Photoheterotrophic extracellular reduction of ferrihydrite activates diverse intracellular metabolic pathways in Rhodopseudomonas palustris for enhanced antibiotic degradation.	Bai X, Yu Q, Sun J, Xie Y, Yuan Y.	Water Res	10.1016/j.watres.2025.123088	2025
	Proteomic analysis of natural photoheterotrophic mixed consortium for biohydrogen production under nongrowing conditions.	Eduardo Hernandez-Guisao R, Axayacatl Gonzalez-Garcia R, McCubbin T, Guerra-Blanco P, Salgado Manjarrez E, Aranda-Barradas J, Velasco A, Ines Garcia-Pena E.	Bioresour Technol	10.1016/j.biortech.2024.132023	2025
	Exploring the Structure-Function Relationships in a 5-Aminolevulinic Acid Synthase and the Use of Protein Engineering to Expand its Substrate Range.	Kim A, Stewart JD.	Biochemistry	10.1021/acs.biochem.4c00599	2025
Enzymology	Electrochemical enhancement of the accumulation of photosensitive components in anoxygenic phototrophic bacteria extracellular: A new insight into the preparation of degradable microbial photosensitizer for water treatment.	He R, Sun J, Yuan Y, Bai X, Lin Q, Zhang Y, Dai K, Xu Z.	J Hazard Mater	10.1016/j.jhazmat.2025.137403	2025
	Rhodopseudomonas palustris Atp2 Protein Exerts Antifungal Effects by Targeting the Ribosomal Protein MoRpl12 in Magnaporthe oryzae.	Chen C, Wu X, Huang Q, Qin Y, Li C, Zhang X, Wang P, Tan X, Liu Y, Chen Y, Zhang D.	Phytopathology	10.1094/phyto-05-24-0169-r	2024
	Amplifying Persistent Luminescence in Heavily Doped Nanopearls for Bioimaging and Solar-to-Chemical Synthesis.	Qi B, Dai W, Lou B, Song B, Miao Z, Wei Y, Ma C, Wang J.	ACS Nano	10.1021/acsnano.4c18244	2025
	Feasibility and mechanism of adsorption and bioreduction of hexavalent chromium using Rhodopseudomonas palustris immobilized on multiple materials.	Liu S, Zhang Y, Duan Y, Shen X, Guo H, Kong Z, Gao Y, Han X, Wang W, Daigger GT, Zhang G, Li R, Liu Y, Song Z, Song G.	Chemosphere	10.1016/j.chemosphere.2024.143457	2024
Genetics	Reductive evolution and genomic reduction in Rhodopseudomonas.	Gallagher BM, Morrison HM, Bose A.	Appl Environ Microbiol	10.1128/aem.00445-25	2025
	Establishing a quantitative link between crystal violet absorbance and biomass in biofilms.	Stephens S, Mahadevan R, Allen DG.	MethodsX	10.1016/j.mex.2025.103630	2025
	In-situ construction of biomineralized cadmium sulfide-Rhodopseudomonas palustris hybrid system: Mechanism of synergistic light utilization.	Xing SF, Tian HF, Yan Z, Wang Z, Song C, Wang SG.	Chemosphere	10.1016/j.chemosphere.2024.143109	2024
	Improving a photosynthetic bioprocess with a ubiquitous additive: Using clay powder in the cultivation of Rhodopseudomonas palustris.	Stephens S, Abo-Hashesh M, Mahadevan R, Allen DG.	Biotechnol Rep (Amst)	10.1016/j.btre.2025.e00930	2025
	A novel antifungal peptide, SP1.2, from Rhodopseudomonas palustris against the rice blast pathogen.	Wu X, Qin Y, Li C, Zhang X, Tan X, Liu Y, Chen Y, Zhang D.	Pest Manag Sci	10.1002/ps.8387	2024
	Trace metal interaction with thermophilic phototrophic anaerobic bacterium Chloroflexus aurantiacus.	Pokrovsky OS, Kompantzeva EI, Gonzalez AG.	Chemosphere	10.1016/j.chemosphere.2024.143192	2024
	Photofermentative production of poly-beta-hydroxybutyrate (PHB) by purple non-sulfur bacteria using olive oil by-products.	Mugnai G, Bernabo L, Daly G, Corneli E, Adessi A.	Bioresour Bioprocess	10.1186/s40643-025-00856-x	2025
Genetics	Genomic Insights and Comparative Analysis of Novel Rhodopseudomonas Species: A Purple Non-Sulfur Bacterium Isolated from Latex Rubber Sheet Wastewater.	Klaysubun C, Chaichana N, Suwannasin S, Singkhamanan K, Yaikhan T, Kantachote D, Pomwised R, Wonglapsuwan M, Surachat K.	Life (Basel)	10.3390/life15050754	2025
	Rice N-biofertilization by inoculation with an engineered photosynthetic diazotroph	Zeng Y, Wang M, Yu Y, Wang L, Cui L, Li C, Liu Y, Zheng Y.	World J Microbiol Biotechnol.		2024
	Growth of electroautotrophic microorganisms using hydrovoltaic energy through natural water evaporation.	Ren G, Ye J, Hu Q, Zhang D, Yuan Y, Zhou S.	Nat Commun	10.1038/s41467-024-49429-0	2024
	Rhodopseudomonas palustris shapes bacterial community, reduces Cd bioavailability in Cd contaminated flooding paddy soil, and improves rice performance.	Su Y, Shi Q, Li Z, Deng H, Zhou Q, Li L, Zhao L, Yuan S, Liu Q, Chen Y.	Sci Total Environ	10.1016/j.scitotenv.2024.171824	2024
	Unnatural Direct Interspecies Electron Transfer Enabled by Living Cell-Cell Click Chemistry.	Zhao YC, Sha C, Zhao XM, Du JX, Zou L, Yong YC.	Angew Chem Int Ed Engl	10.1002/anie.202402318	2024
	Development of an electrochemical separation-Rhodopseudomonas palustris electrolysis cell-coupled system for resourceful treatment of mature leachate landfill.	Bai X, Huang Y, Sun J, Feng C, Yuan Y, Lin Q, Dai K, Zhang P.	J Environ Manage	10.1016/j.jenvman.2024.120726	2024
	Formation of NifA-P_II complex represses ammonium-sensitive nitrogen fixation in diazotrophic proteobacteria lacking NifL.	Zeng Y, Guo L, Gao Y, Cui L, Wang M, Huang L, Jiang M, Liu Y, Zhu Y, Xiang H, Li DF, Zheng Y.	Cell Rep	10.1016/j.celrep.2024.114476	2024
Biotechnology	High enzyme promiscuity in lignin degradation mechanisms in Rhodopseudomonas palustris CGA009.	Kathol M, Chowdhury NB, Immethun C, Alsiyabi A, Morris D, Naldrett MJ, Saha R.	Appl Environ Microbiol	10.1128/aem.00573-25	2025
	Improving nitrogen content in soil and lemon balm (Melissa officinalis L.) yield by purple nonsulfur bacteria Rhodopseudomonas palustris in two consecutive seasons.	Thu LTM, Xuan LNT, Anh NHM, Trong ND, Dao NTX, Quang LT, Tho LTN, Thu HN, Anh NT, Diem NTT, Khuong NQ.	Int Microbiol	10.1007/s10123-024-00515-9	2024
Enzymology	Nutrient enrichment and probiotics for sea urchin Anthocidaris crassipina larvae in captivity to promote large-scale aquaculture.	Chu TW, Chu Y, Sun WT, Pan CY, Pan CH, Ding DS.	J Anim Physiol Anim Nutr (Berl)	10.1111/jpn.13934	2024
	Rice N-biofertilization by inoculation with an engineered photosynthetic diazotroph.	Zeng Y, Wang M, Yu Y, Wang L, Cui L, Li C, Liu Y, Zheng Y.	World J Microbiol Biotechnol	10.1007/s11274-024-03956-6	2024
	Characterization of ferredoxins involved in electron transfer pathways for nitrogen fixation implicates differences in electronic structure in tuning 2[4Fe4S] Fd activity.	Lewis NM, Kisgeropoulos EC, Lubner CE, Fixen KR.	J Inorg Biochem	10.1016/j.jinorgbio.2024.112521	2024
	Non-Respiratory Extracellular Electron Transfer Competes with Nitrogenase for Electrons in Rhodopseudomonas Palustris.	Liu X, Qi P, Fan W, Liu W, Li X, Nie Y, Wu XL.	Adv Sci (Weinh)	10.1002/advs.202501376	2025
	Biosurfactant potential and antiviral activity of multistrain probiotics.	Kok T, Nyotohadi D.	Heliyon	10.1016/j.heliyon.2023.e22837	2024
Genetics	Synergistic molecular mechanism of degradation in dye wastewater by Rhodopseudomonas palustris intimately coupled carbon nanotube - Silver modified titanium dioxide photocatalytic composite with sodium alginate.	Chen J, Liu K, Liu Y.	J Environ Manage	10.1016/j.jenvman.2023.119913	2024
	A novel alginate-embedded magnetic biochar-anoxygenic photosynthetic bacteria composite microspheres for multipollutant removal: Mechanisms of photo-bioelectrochemical enhancement and excellent reusability performance.	He R, Sun J, Bai X, Lin Q, Yuan Y, Zhang Y, Dai K, Xu Z.	Environ Res	10.1016/j.envres.2024.118158	2024
	Anoxygenic phototrophic purple non-sulfur bacteria: tool for bioremediation of hazardous environmental pollutants	Dhar K, Venkateswarlu K, Megharaj M.	World J Microbiol Biotechnol.		2023
	Functional Coupling of Biohybrid Photosynthetic Antennae and Reaction Center Complexes: Quantitative Comparison with Native Antennae.	Dewa T, Kimoto K, Kasagi G, Harada H, Sumino A, Kondo M.	J Phys Chem B	10.1021/acs.jpcb.3c04922	2023
Biotechnology	Slaughterhouse by-products composting: can microorganisms inoculum addition mitigate final compost odor emission?	Batista-Barwinski MJ, Butzke-Souza N, Radetski-Silva R, Tiegs F, Lacoli R, Venturieri GA, Miller PRM, Branco JO, Ariente-Neto R, Radetski CM.	J Environ Sci Health B	10.1080/03601234.2024.2312063	2024
	The role of chemical fertilizer reduction and different microbial inoculants on yield increase in lettuce cultivation.	Kitir Sen N, Kocaman A, Aydemir OE.	BMC Plant Biol	10.1186/s12870-025-06986-w	2025
	Performance of production of polyhydroxyalkanoates from food waste fermentation with Rhodopseudomonas palustris.	Dan T, Jing H, Shen T, Zhu J, Liu Y.	Bioresour Technol	10.1016/j.biortech.2023.129165	2023
	Stability and biomineralization of cadmium sulfide nanoparticles biosynthesized by the bacterium Rhodopseudomonas palustris under light.	Xing SF, Tian HF, Yan Z, Song C, Wang SG.	J Hazard Mater	10.1016/j.jhazmat.2023.131937	2023
	P_II protein is essential for transcriptional regulation of anf gene cluster for iron-only nitrogenase in Rhodopseudomonas palustris.	Zeng Y, Cui L, Wang M, Huang L, Jiang M, Liu Y, Gao Y, Zheng Y.	Appl Environ Microbiol	10.1128/aem.00465-25	2025
	Effects of adding N2-fixing Rhodopseudomonas palustris to stimulate the growth and yield of canary melon (Cucumis melo L.).	Tuan LM, Huyen NPT, Thuy VTB, Quang LT, Thu LTM, Dao NTX, Nhan TC, Xuan LNT, Khuong NQ.	PLoS One	10.1371/journal.pone.0329938	2025
	Structural insights into hydrolytic defluorination of difluoroacetate by microbial fluoroacetate dehalogenases.	Khusnutdinova AN, Batyrova KA, Brown G, Fedorchuk T, Chai YS, Skarina T, Flick R, Petit AP, Savchenko A, Stogios P, Yakunin AF.	FEBS J	10.1111/febs.16903	2023
Genetics	Electrogenic engineered flow through tri-phasic wetland system for azo dye treatment: Microbial dynamics and functional metagenomics.	Yeruva DK, S VM.	Environ Pollut	10.1016/j.envpol.2023.122107	2023
	Anoxygenic photoautotrophy driven by humus and microplastics in a photosynthetic bacterium.	Li Y, Qu K, Yang J, Wang S, Yan Z.	ISME Commun	10.1093/ismeco/ycaf067	2025
	The effects of Rhodopseudomonas palustris on the improvement of agronomic traits and key enzyme-coding genes related to polysaccharide biosynthesis in Codonopsis pilosula	Wang W, Gao S, Sun Y, Yang H, Li J, Li J, Zheng X, Yang G.	PLoS One		2025
	Intensification of Hydrogen Production by a Co-culture of Syntrophomonas wolfei and Rhodopseudomonas palustris Employing High Concentrations of Butyrate as a Substrate.	Lozano DA, Nino-Navarro C, Chairez I, Salgado-Manjarrez E, Garcia-Pena EI.	Appl Biochem Biotechnol	10.1007/s12010-022-04220-z	2023
	Lumichrome from the photolytic riboflavin acts as an electron shuttle in microbial photoelectrochemical systems.	Li X, Tian X, Yan X, Huo N, Wu X, Zhao F.	Bioelectrochemistry	10.1016/j.bioelechem.2023.108439	2023
	Engineering of a Malonyl-CoA Ligase for Production of Fluorinated Polyketide Extender Units.	Paulsel TQ, Williams GJ.	Chembiochem	10.1002/cbic.202400532	2024
	Standardized Quorum Sensing Tools for Gram-Negative Bacteria.	Mugica-Galan P, Miro-Bueno J, Hueso-Gil A, Japon P, Goni-Moreno A.	ACS Synth Biol	10.1021/acssynbio.5c00036	2025
	Modelling and testing of a light reflector system for the enhancement of biohydrogen production in a thermosiphon photobioreactor.	Bosman CE, Pott RWM, Bradshaw SM.	J Biotechnol	10.1016/j.jbiotec.2022.11.016	2023
	Excited-State Properties of Fully Reduced Flavins in Ferredoxin-NADP⁺ Oxidoreductase.	Zhuang B, Aleksandrov A, Seo D, Vos MH.	J Phys Chem Lett	10.1021/acs.jpclett.2c03741	2023
	Mammalian carcass decay increases carbon storage and temporal turnover of carbon-fixing microbes in alpine meadow soil.	Wang X, Han Q, Yu Q, Wang S, Yang J, Su W, Wan-Yan R, Sun X, Li H.	Environ Res	10.1016/j.envres.2023.115653	2023
	Perceiving biobased plastics as an alternative and innovative solution to combat plastic pollution for a circular economy.	Rajvanshi J, Sogani M, Kumar A, Arora S, Syed Z, Sonu K, Gupta NS, Kalra A.	Sci Total Environ	10.1016/j.scitotenv.2023.162441	2023
	Exploiting the anaerobic fermentation of alfalfa as a renewable source of squalene	Zong C, Wu Q, Sodo, Dong Z, Liu Q.	Journal of the Science of Food and Agriculture.		2023
	Spring Rest-Grazing Time Influenced Soil Phosphorus Fractions by Altering the Abundance of Genes Involved in Phosphorus Cycling in a Subalpine Meadow.	Xiao H, Jing Y, Ma K, Wang Y, Xu C, Yu X.	Microorganisms	10.3390/microorganisms13112618	2025
	A mechanistic mathematical model for photo fermentative hydrogen and polyhydroxybutyrate production.	Policastro G, Luongo V, Frunzo L, Cogan N, Fabbricino M.	Math Biosci Eng	10.3934/mbe.2023321	2023
Biotechnology	Rhodopseudomonas palustris: A biotechnology chassis.	Brown B, Wilkins M, Saha R.	Biotechnol Adv	10.1016/j.biotechadv.2022.108001	2022
	Utilizing Microbial Electrochemical Methods to Enhance Lycopene Production in Rhodopseudomonas palustris.	Huang N, Wang Z, Xiao X, Gai T, Zhao D, Liu L, Wu W.	Foods	10.3390/foods13233811	2024
	Large-scale prediction of outer-membrane multiheme cytochromes uncovers hidden diversity of electroactive bacteria and underlying pathways.	Garber AI, Nealson KH, Merino N.	Front Microbiol	10.3389/fmicb.2024.1448685	2024
	A Synergistic Role of Photosynthetic Bacteria and Fungal Community in Pollutant Removal in an Integrated Aquaculture Wastewater Bioremediation System.	Ramzan MN, Shen D, Wei Y, Raza B, Yuan H, Emmanuel A, Mushtaq Z, Zheng Z.	Biology (Basel)	10.3390/biology14080959	2025
	Extracellular electron uptake for CO₂ fixation by Rhodopseudomonas palustris during electro-cultivation in darkness.	Sun C, Yu Q, Zhao Z, Zhang Y.	Sci Total Environ	10.1016/j.scitotenv.2022.157864	2022
	Effects of water and feed based RISCO-NUTRIFOUR probiotic supplementation on the technological and physicochemical quality of broiler breast meat.	Al-Abdullatif AA, Al-Garadi MA, Qaid MM, Matar AM, Alobre MM, Al-Badwi MA, Hussein EO, Suliman GM.	Front Vet Sci	10.3389/fvets.2025.1517078	2025
	Construction of 5-aminolevulinic acid synthase variants by cysteine-targeted mutation to release heme inhibition.	He G, Jiang M, Cui Z, Sun X, Chen T, Wang Z.	J Biosci Bioeng	10.1016/j.jbiosc.2022.07.019	2022
Metabolism	Framework to improve biohydrogen generation with estrogen co-metabolism under complete suppression of nitrogen source.	Syed Z, Sogani M, Sharma G, Sonu K, Rajvanshi J, Gupta NS.	Bioresour Technol	10.1016/j.biortech.2022.127595	2022
	Dissolution rate and growth performance reveal struvite as a sustainable nutrient source to produce a diverse set of microbial protein.	Muys M, Gonzalez Camara SJ, Derese S, Spiller M, Verliefde A, Vlaeminck SE.	Sci Total Environ	10.1016/j.scitotenv.2022.161172	2023
	Crystal structure of 5-Aminolevulinate synthase HemA from Rhodopseudomonas palustris presents multiple conformations.	Zhang T, Chen J, Zheng P, Gong W, Sun J, Liu H.	Biochem Biophys Res Commun	10.1016/j.bbrc.2022.04.021	2022
	Discovery of Potential Antileishmanial Compounds Through Phenotypic Screening of an Alkaloid Library.	Soh-Kamdjo C, Gonzalez-Montero MC, Garcia-Estrada C, Melcon-Fernandez E, Fernandez-Rubio C, Perez-Pertejo Y, Reguera RM, Balana-Fouce R.	Molecules	10.3390/molecules30214210	2025
	Intracytoplasmic-membrane development in alphaproteobacteria involves the homolog of the mitochondrial crista-developing protein Mic60.	Munoz-Gomez SA, Cadena LR, Gardiner AT, Leger MM, Sheikh S, Connell LB, Bily T, Kopejtka K, Beatty JT, Koblizek M, Roger AJ, Slamovits CH, Lukes J, Hashimi H.	Curr Biol	10.1016/j.cub.2023.02.059	2023
	Exploiting the anaerobic fermentation of alfalfa as a renewable source of squalene.	Zong C, Wu Q, Shao T, Dong Z, Liu Q.	J Sci Food Agric	10.1002/jsfa.12134	2023
	Investigating and modeling the effect of light intensity on Rhodopseudomonas palustris growth.	Ross BS, Pott RWM.	Biotechnol Bioeng	10.1002/bit.28026	2022
	Evaluation of nitrogen fixation in the marine purple photosynthetic bacterium Rhodovulum sulfidophilum under autotrophic and heterotrophic conditions.	Suzuki M, Shirai T, Morey-Yagi SR, Kondo A, Numata K.	Sci Rep	10.1038/s41598-025-03605-4	2025
	Rapid degradation of Congo red wastewater by Rhodopseudomonas palustris intimately coupled carbon nanotube - Silver modified titanium dioxide photocatalytic composite with sodium alginate.	Liu K, Yang Y, Sun F, Liu Y, Tang M, Chen J.	Chemosphere	10.1016/j.chemosphere.2022.134417	2022
	Purple bacteria screening for photoautohydrogenotrophic food production: Are new H₂-fed isolates faster and nutritionally better than photoheterotrophically obtained reference species?	Spanoghe J, Ost KJ, Van Beeck W, Vermeir P, Lebeer S, Vlaeminck SE.	N Biotechnol	10.1016/j.nbt.2022.08.005	2022
Biotechnology	Development of a low-cost inoculum to improve composting of cattle slaughterhouse by-products.	Batista-Barwinski MJ, Venturieri GA, Janke L, Sanches-Simoes E, Tiegs F, Ariente-Neto R, Testolin RC, Miller PRM, Somensi CA, Radetski CM.	J Environ Sci Health B	10.1080/03601234.2022.2114742	2022
	Evolution of Rhodopseudomonas palustris to degrade halogenated aromatic compounds involves changes in pathway regulation and enzyme specificity.	Haq IU, Christensen A, Fixen KR.	Appl Environ Microbiol	10.1128/aem.02104-23	2024
	Microbial cross-feeding stabilized by segregation of a dependent mutant from its independent ancestor.	Schakel OF, Fritts RK, Zmuda AJ, Setayeshgar S, McKinlay JB.	ISME J	10.1093/ismejo/wraf131	2025
	Toxic Effects of p-Chloroaniline on Cells of Fungus Isaria fumosorosea SP535 and the Role of Cytochrome P450.	Huang S, Gao J, Zhou L, Gao L, Song M, Zeng Q.	Toxics	10.3390/toxics13060506	2025
	A Comprehensive Study of Biohopanoid Production in Alphaproteobacteria: Biosynthetic, Chemotaxonomical, and Geobiological Implications.	Sinninghe Damste JS, Koenen M, Thiel V, Richter N, Hopmans EC, Bale NJ.	Geobiology	10.1111/gbi.70038	2025
	Carotenoids synthesis affects the salt tolerance mechanism of Rhodopseudomonas palustris.	Li M, Zhu T, Yang R, Wang Z, Liu M, Yang J.	Front Microbiol	10.3389/fmicb.2023.1292937	2023
	Dietary RISCO NUTRIFOUR multistrain multikingdom probiotic consortia improves meat quality carcass traits and growth efficiency in heat stressed broilers.	Al-Abdullatif AA, Al-Garadi MA, Qaid MM, Matar AM, Alobre MM, Al-Badwi MA, Suliman GM, Hussein EO.	Sci Rep	10.1038/s41598-025-17988-x	2025
	Poly-beta-hydroxybutyrate Production from Bread Waste via Sequential Dark Fermentation and Photofermentation.	Bernabo L, Daly G, Mugnai G, Galli V, Corneli E, Granchi L, Adessi A.	Foods	10.3390/foods14101659	2025
	Overexpression of RuBisCO form I and II genes in Rhodopseudomonas palustris TIE-1 augments polyhydroxyalkanoate production heterotrophically and autotrophically.	Ranaivoarisoa TO, Bai W, Karthikeyan R, Steele H, Silberman M, Olabode J, Conners E, Gallagher B, Bose A.	Appl Environ Microbiol	10.1128/aem.01438-24	2024
	Genomic insight into O-demethylation of 4-methoxybenzoate by a two-component system from Amycolatopsis magusensis KCCM40447.	Pardhe BD, Paudel L, Han SR, Oh TJ.	Heliyon	10.1016/j.heliyon.2024.e25083	2024
Enzymology	Improving squalene production by blocking the competitive branched pathways and expressing rate-limiting enzymes in Rhodopseudomonas palustris.	Xu W, Wang D, Fan J, Zhang L, Ma X, Yao J, Wang Y.	Biotechnol Appl Biochem	10.1002/bab.2222	2022
	Plant-growth-promoting rhizobacteria for mitigating salinity stress in rice farming: a review of the Vietnamese Mekong Delta.	Nguyen TTM, Ha-Tran DM, Huang CC.	Front Plant Sci	10.3389/fpls.2025.1635193	2025
	The influence of probiotic administration on the phagocytic and oxidative burst activity of neutrophils and monocytes in the peripheral blood of dairy cows during different lactation periods.	Brodzki P, Gorzkos H, Marczuk J, Lisiecka U, Junkuszew A, Krakowski L, Szczubial M, Brodzki N, Glodkowska K.	J Vet Res	10.2478/jvetres-2024-0043	2024
	Essential Genes Discovery in Microorganisms by Transposon-Directed Sequencing (Tn-Seq): Experimental Approaches, Major Goals, and Future Perspectives.	Fernandez-Garcia G, Valdes-Chiara P, Villazan-Gamonal P, Alonso-Fernandez S, Manteca A.	Int J Mol Sci	10.3390/ijms252011298	2024
Enzymology	Exploring the dynamics of allostery through multi-dimensional crystallography.	Hatton CE, Mehrabi P.	Biophys Rev	10.1007/s12551-024-01224-3	2024
Enzymology	Characterisation of a Self-Sufficient Cytochrome P450 Enzyme From the Bacterium Thermosporothrix hazakensis and Its Conversion Into a Peroxygenase.	Podgorski MN, Lee JHZ, Scaffidi-Muta JM, Akter J, Bell SG.	Microb Biotechnol	10.1111/1751-7915.70234	2025
	Engineered bacteriophytochrome heterodimers for research and applications.	Tuure I, Bohm C, Rumfeldt J, Multamaki E, Takala H.	J Biol Chem	10.1016/j.jbc.2025.110452	2025
Genetics	Comprehensive genome-wide analysis for the safety assessment of microbial biostimulants in agricultural applications.	Bellotti G, Cortimiglia C, Antinori ME, Cocconcelli PS, Puglisi E.	Microb Genom	10.1099/mgen.0.001391	2025
	Community structure and function of microbiomes in polluted stretches of river Yamuna in New Delhi, India, using shotgun metagenomics.	Parida PK, Behera BK, Dehury B, Rout AK, Sarkar DJ, Rai A, Das BK, Mohapatra T.	Environ Sci Pollut Res Int	10.1007/s11356-022-20766-1	2022
Metabolism	Expression of Alternative Nitrogenases in Rhodopseudomonas palustris Is Enhanced Using an Optimized Genetic Toolset for Rapid, Markerless Modifications.	du Toit JP, Lea-Smith DJ, Git A, Hervey JRD, Howe CJ, Pott RWM.	ACS Synth Biol	10.1021/acssynbio.0c00496	2021
Enzymology	Enhanced photodegradation of antibiotics based on anoxygenic photosynthetic bacteria and bacterial metabolites: A sustainably green strategy for the removal of high-risk organics from secondary effluent.	Zhao M, Bai X, Zhang Y, Yuan Y, Sun J.	J Hazard Mater	10.1016/j.jhazmat.2022.128350	2022
Phylogeny	Heterogeneity of the Tissue-specific Mucosal Microbiome of Normal Grass Carp (Ctenopharyngodon idella).	Zhao N, Guo J, Zhang B, Liu K, Liu Y, Shen Y, Li J.	Mar Biotechnol (NY)	10.1007/s10126-022-10113-3	2022
Enzymology	[Engineering the C4 pathway of Corynebacterium glutamicum for efficient production of 5-aminolevulinic acid].	Wang L, Yan S, Yang T, Xu M, Zhang X, Shao M, Li H, Rao Z.	Sheng Wu Gong Cheng Xue Bao	10.13345/j.cjb.210057	2021
	GroEL protein from the potential biocontrol agent Rhodopseudomonas palustris enhances resistance to rice blast disease.	Wu X, Chen Y, Li C, Zhang X, Tan X, Lv L, Liu Y, Zhang D.	Pest Manag Sci	10.1002/ps.6584	2021
	The effect of light emission spectrum on biohydrogen production by Rhodopseudomonas palustris.	Bosman CE, Pott RWM, Bradshaw SM.	Bioprocess Biosyst Eng	10.1007/s00449-023-02863-8	2023
	Microbial inoculations improved rice yields by altering the presence of soil rare bacteria.	Xiao X, Zhu Y, Gao C, Zhang Y, Gao Y, Zhao Y.	Microbiol Res	10.1016/j.micres.2021.126910	2022
	Impact of Sustainable Soil Cropping Management on the Production and Stability of Bioactive Compounds in Tanacetum balsamita L. by Cold Pressure Extraction.	Bonetti A, Grattacaso M, Lonardo SD, D'Acqui LP.	Plants (Basel)	10.3390/plants14060948	2025
Genetics	A Rhodopseudomonas strain with a substantially smaller genome retains the core metabolic versatility of its genus.	Oda Y, Nelson WC, Alexander WG, Nguyen S, Egbert RG, Harwood CS.	Appl Environ Microbiol	10.1128/aem.02056-24	2025
	Effects of abiotic and biotic elicitors on tomato resistance to tomato brown rugose fruit virus.	Zohoursoleimani R, Aeini M, Ghodoum Parizipour MH.	Sci Rep	10.1038/s41598-025-13578-z	2025
	Electron conductive compounds alter fermentative pathways and cooperation in Clostridium carboxidivorans and Clostridium acetobutylicum in co-culture.	Feliu-Paradeda L, Puig S, Baneras L.	FEMS Microbiol Ecol	10.1093/femsec/fiaf090	2025
Enzymology	Metal-Triggered FAD Reduction in d-2-Hydroxyglutarate Dehydrogenase from Pseudomonas aeruginosa PAO1	Quaye J, Gadda G.	ACS Bio Med Chem Au		2024
	Characterization of the Pyrroloquinoline Quinone Producing Rhodopseudomonas palustris as a Plant Growth-Promoting Bacterium under Photoautotrophic and Photoheterotrophic Culture Conditions.	Lo SC, Tsai SY, Chang WH, Wu IC, Sou NL, Hung SW, Chiang EI, Huang CC.	Int J Mol Sci	10.3390/ijms241814080	2023
	Anaerobic 3-methylhopanoid production by an acidophilic photosynthetic purple bacterium.	Mayer MH, Parenteau MN, Kempher ML, Madigan MT, Jahnke LL, Welander PV.	Arch Microbiol	10.1007/s00203-021-02561-7	2021
	To Be, or Not to Be, an Inhibitor: A Comparison of Azole Interactions with and Oxidation by a Cytochrome P450 Enzyme.	Podgorski MN, Coleman T, Giang PD, Wang CR, Bruning JB, Bernhardt PV, De Voss JJ, Bell SG.	Inorg Chem	10.1021/acs.inorgchem.1c02786	2022
Enzymology	Increasing coenzyme Q₁₀ yield from Rhodopseudomonas palustris by expressing rate-limiting enzymes and blocking carotenoid and hopanoid pathways.	Xu W, Ma X, Yao J, Wang D, Li W, Liu L, Shao L, Wang Y.	Lett Appl Microbiol	10.1111/lam.13479	2021
Enzymology	Enhanced metronidazole removal by binary-species photoelectrogenic biofilm of microaglae and anoxygenic phototrophic bacteria.	Zhang X, Sun J, Zhao M.	J Environ Sci (China)	10.1016/j.jes.2021.07.016	2022
	Engineering a Photoautotrophic Microbial Coculture toward Enhanced Biohydrogen Production.	Pan M, Colpo RA, Roussou S, Ding C, Lindblad P, Kromer JO.	Environ Sci Technol	10.1021/acs.est.4c08629	2025
	Novel Biological Approach to Mitigate Methane Emissions from Livestock Slurry through Microbial Conversion of Glycerol.	Ambrose HW, Bambace MF, Marietou A, Hosek J, Feilberg A, Kofoed MVW, Schwab C.	Environ Sci Technol	10.1021/acs.est.4c12999	2025
Phylogeny	Evaluation of the gastric microbiota based on body mass index using 16S rRNA gene sequencing.	Lee SH, Kim EB, Park SC, Nam SJ, Cho H, Jeon HJ, Lee SP.	Front Cell Infect Microbiol	10.3389/fcimb.2025.1651316	2025
	Functional Analyses of a Rhodobium marinum RH-AZ Genome and Its Application for Promoting the Growth of Rice Under Saline Stress	Gao Y, Xu C, Tang T, Xie X, Huang R, Xiao Y, Shi X, Hu H, Liu Y, Peng J, Zhang D.	Plants (Basel)		2025
	Biotransformation of Phenolics in Spent Liquor from Aqueous Ammonia Pretreatment.	Zhou S, Garcia-Mancilla M, Francis Clar J, Runge TM, Donohue TJ, Noguera DR, Karlen SD.	ChemSusChem	10.1002/cssc.202500881	2025
	Spectrofluorometric Insights into the Application of PAM Fluorometry in Photosynthetic Research.	Sma-Air S, Ritchie RJ.	Photochem Photobiol	10.1111/php.13413	2021
	Valorization of Purple Phototrophic Bacteria Biomass Resulting from Photo Fermentation Aimed at Biohydrogen Production.	Policastro G, Cesaro A, Fabbricino M.	Molecules	10.3390/molecules29071679	2024
	Microbial food from light, carbon dioxide and hydrogen gas: Kinetic, stoichiometric and nutritional potential of three purple bacteria.	Spanoghe J, Vermeir P, Vlaeminck SE.	Bioresour Technol	10.1016/j.biortech.2021.125364	2021
	Metagenomic insights into the "window" effect of static magnetic field on nitrous oxide emission from biological nitrogen removal process at low temperature.	Zhu YM, Xu D, Ren H, Geng J, Xu K.	J Environ Manage	10.1016/j.jenvman.2021.113377	2021
	Comparison of Photofermentative Hydrogen Production in Cylindrical Photobioreactors Using Different Mixing Systems.	Zampieri RM, Touloupakis E, Faraloni C, Moia IC.	Microorganisms	10.3390/microorganisms13061386	2025
	Protein Interactions in Rhodopseudomonas palustris TIE-1 Reveal the Molecular Basis for Resilient Photoferrotrophic Iron Oxidation.	Trindade IB, Firmino MO, Noordam SJ, Alves AS, Fonseca BM, Piccioli M, Louro RO.	Molecules	10.3390/molecules28124733	2023
	Improvement of Nutrient Uptake, Yield of Black Sesame (Sesamum indicum L.), and Alluvial Soil Fertility in Dyke by Spent Rice Straw from Mushroom Cultivation as Biofertilizer Containing Potent Strains of Rhodopseudomonas palustris.	Khuong NQ, Thuc LV, Giang CT, Xuan LNT, Thu LTM, Isao A, Jun-Ichi S.	ScientificWorldJournal	10.1155/2023/1954632	2023
	Characterizing microbial communities and their correlation with genetic mutations in early-stage lung adenocarcinoma: implications for disease progression and therapeutic targets.	Yang HS, Zhang J, Feng HX, Qi F, Kong FJ, Zhu WJ, Liang CY, Zhang ZR.	Front Oncol	10.3389/fonc.2024.1498524	2024
	Structural characterization and functional activity of an exopolysaccharide secreted by Rhodopseudomonas palustris GJ-22.	Zhai Z, Chen A, Zhou H, Zhang D, Du X, Liu Q, Wu X, Cheng J, Chen L, Hu F, Liu Y, Su P.	Int J Biol Macromol	10.1016/j.ijbiomac.2020.11.165	2021
	Crucial gating residues govern the enhancement of peroxygenase activity in an engineered cytochrome P450 O-demethylase.	Zhao P, Jiang Y, Wang Q, Chen J, Yao F, Cong Z.	Chem Sci	10.1039/d4sc02418d	2024
Metabolism	Assignments of ¹⁹F NMR resonances and exploration of dynamics in a long-chain flavodoxin.	Varner TA, Mohamed-Raseek N, Miller AF.	Arch Biochem Biophys	10.1016/j.abb.2021.108839	2021
	The biocontrol potential of acid-resistant Rhodopseudomonas palustris KTSSR54 and its exopolymeric substances against rice fungal pathogens to enhance rice growth and yield	Nookongbut P, Kantachote D, Khuong NQ, Tantirungkij M.	Biol Control	10.1016/j.biocontrol.2020.104354	2020
	Rhodopseudomonas palustris Quorum Sensing Molecule pC-HSL Induces Systemic Resistance to TMV Infection via Upregulation of NbSIPK/NbWIPK Expressions in Nicotiana benthamiana.	Du X, Huang R, Zhang Z, Zhang D, Cheng J, Tian P, Wang Y, Zhai Z, Chen L, Kong X, Liu Y, Su P.	Phytopathology	10.1094/phyto-05-20-0177-r	2021
	The role of microbiomes in cooperative detoxification mechanisms of arsenate reduction and arsenic methylation in surface agricultural soil.	Rueangmongkolrat N, Uthaipaisanwong P, Kusonmano K, Pruksangkul S, Sonthiphand P.	PeerJ	10.7717/peerj.18383	2024
Enzymology	Enzyme-constrained metabolic model of Treponema pallidum identified glycerol-3-phosphate dehydrogenase as an alternate electron sink.	Shahreen N, Chowdhury NB, Stone E, Knobbe E, Saha R.	mSystems	10.1128/msystems.01555-24	2025
	Augmenting the biodegradation of recalcitrant ethinylestradiol using Rhodopseudomonas palustris in a hybrid photo-assisted microbial fuel cell with enhanced bio-hydrogen production.	Sogani M, Pankan AO, Dongre A, Yunus K, Fisher AC.	J Hazard Mater	10.1016/j.jhazmat.2020.124421	2021
	The role and challenges of intratumoral microbiota in colorectal cancer immunotherapy.	Hao M, Xu H, Li M, Jiao D.	Front Pharmacol	10.3389/fphar.2025.1634703	2025
	Optimization of three anoxygenic photosynthetic bacteria as feed to enhance growth, survival, and water quality in fairy shrimp (Streptocephalus sirindhornae) cultivation	Saejung C, Chaiyarat A, Sanoamuang L.	Aquaculture	10.1016/j.aquaculture.2020.736288	2021
	Ribulose 1,5-Bisphosphate Carboxylase/Oxygenase Is Required in Bradyrhizobium diazoefficiens for Efficient Soybean Root Colonization and Competition for Nodulation.	Balda RS, Cogo C, Falduti O, Bongiorno FM, Brignoli D, Sandobal TJ, Althabegoiti MJ, Lodeiro AR.	Plants (Basel)	10.3390/plants13172362	2024
	Development of a highly efficient p-coumaric acid-responsive biosensor in Saccharomyces cerevisiae.	Pang X, Zhu J, Li Y, Xiao J, Zhang X, Ren D, Zhou P.	Synth Syst Biotechnol	10.1016/j.synbio.2025.07.007	2025
	Characterization of the biosorption of fast black azo dye K salt by the bacterium Rhodopseudomonas palustris 51ATA strain	Ozturk A, Bayol E, Abdullah MI.	Electron J Biotechnol		2020
	Electric Potential of Chlorella sp. Microalgae Biomass in Microbial Fuel Cells (MFCs).	Aguero-Quinones R, De La Cruz-Noriega M, Rojas-Villacorta W.	Bioengineering (Basel)	10.3390/bioengineering12060635	2025
	Enzymatic Cascades for Stereoselective and Regioselective Amide Bond Assembly.	Torri D, Bering L, Yates LRL, Angiolini SM, Xu G, Cuesta-Hoyos S, Shepherd SA, Micklefield J.	Angew Chem Int Ed Engl	10.1002/anie.202422185	2025
	Biofloc technology significantly reshapes water microbiome and improves survival rates in Japanese eel (Anguilla japonica).	Yang J, Choi H, Park JS, Cha Y, Hwang J-A, Oh S-Y.	Microbiol Spectr	10.1128/spectrum.02206-24	2025
	Energetic constraints of metal-reducing bacteria as biocatalysts for microbial electrosynthesis.	Miller SD, Ford KC, Gruenberg Cross MC, TerAvest MA.	Biotechnol Biofuels Bioprod	10.1186/s13068-025-02666-x	2025
	Tunneling Mechanisms of Quinones in Photosynthetic Reaction Center-Light Harvesting 1 Supercomplexes.	Mao R, Guo J, Bie L, Liu LN, Gao J.	Small Sci	10.1002/smsc.202400188	2024
Genetics	Deciphering the microbial communities of alkaline hot spring in Panamik, Ladakh, India using a high-throughput sequencing approach.	Choudhary G, Kumari S, Anu K, Devi S.	Braz J Microbiol	10.1007/s42770-024-01346-6	2024
	Multidimensional optimization for accelerating light-powered biocatalysis in Rhodopseudomonas palustris.	Zhang Y, Meng W, He Y, Chen Y, Shao M, Yuan J.	Biotechnol Biofuels Bioprod	10.1186/s13068-023-02410-3	2023
	Overexpression of Tetrahymena Cysteine Synthetase 1 Promotes Cadmium Removal by Biosynthesizing Cadmium Sulfide Quantum Dots in Escherichia coli.	Lei W, Liu J, Liu Y, Xu J, Wang W.	Int J Mol Sci	10.3390/ijms26083685	2025
	Metal ion-enhanced photosynthetic bacteria for bioplastic production from kitchen waste digestate: performance and mechanism	Zhao W, Liu H, Li J, Liu S, Tao X, Sun L, Lv L, Liang J, Zhang G.	Front Microbiol		2025
Genetics	Hidden Markov Model-Based Prokaryotic Genome Space Mining Reveals the Widespread Pervasiveness of Complex I and Its Potential Evolutionary Scheme.	Shirsath A, Khairnar SV, Anand A, Prabhakaran DM, Anand A.	Genome Biol Evol	10.1093/gbe/evaf154	2025
	Elucidating metabolic tuning of mixed purple phototrophic bacteria biofilms in photoheterotrophic conditions through microbial photo-electrosynthesis.	Diaz-Rullo Edreira S, Vasiliadou IA, Prado A, Espada JJ, Wattiez R, Leroy B, Martinez F, Puyol D.	Commun Biol	10.1038/s42003-024-07188-0	2024
	Structures of myxobacterial phytochrome revealed by cryo-EM using the Spotiton technique and with x-ray crystallography	Karki P, Menendez D, Budell W, Dangi S, Hernandez C, Mendez J, Muniyappan S, Basu S, Schwander P, Malla T, Stojkovic E, Schmidt M.	Struct Dyn		2025
Metabolism	Sirtuin-dependent reversible lysine acetylation of the o-succinylbenzoyl-coenzyme A synthetase of Bacillus subtilis.	Burckhardt RM, Escalante-Semerena JC.	Microbiol Spectr	10.1128/spectrum.02011-24	2024
	Pathway crosstalk enables degradation of aromatic compounds in marine Roseobacter clade bacteria.	Xu H-W, Wang X-Y, Wei Y, Cao Y, Wang S-G, Xia P-F.	Appl Environ Microbiol	10.1128/aem.00978-25	2025
Metabolism	The emergence of metabolisms through Earth history and implications for biospheric evolution.	Moody ERR, Williams TA, Alvarez-Carretero S, Szollosi GJ, Pisani D, Lenton TM, Donoghue PCJ.	Philos Trans R Soc Lond B Biol Sci	10.1098/rstb.2024.0097	2025
Metabolism	A New Type of Light-Harvesting Complex Detected when Growing Rhodopseudomonas palustris under Low Light Intensity Conditions.	Serdyuk OP, Smolygina LD, Ashikhmin AA.	Dokl Biochem Biophys	10.1134/s160767292002012x	2020
	Overexpression of ATP Synthase Subunit Beta (Atp2) Confers Enhanced Blast Disease Resistance in Transgenic Rice.	Huang Q, Chen C, Wu X, Qin Y, Tan X, Zhang D, Liu Y, Li W, Chen Y.	J Fungi (Basel)	10.3390/jof10010005	2023
	Synergistic Effects of Microbial Biostimulants and Calcium in Alleviating Drought Stress in Oilseed Rape.	Gaveliene V, Mockeviciute R, Jankovska-Bortkevic E, Sveikauskas V, Zareyan M, Zalnierius T, Jankauskiene J, Jurkoniene S.	Microorganisms	10.3390/microorganisms13030530	2025
	Nitrogen-Fixing Bacterium GXGL-4A Promotes the Growth of Cucumber Plant Under Nitrogen Stress by Altering the Rhizosphere Microbial Structure	Han Y, Bao Y, Wang E, Zhang Y, Liu B, Chen Y.	Microorganisms		2025
	Development of an Escherichia coli Cell-Based Biosensor for Aspirin Monitoring by Genetic Engineering of MarR.	Kim Y, Jeon Y, Song K, Ji H, Hwang SJ, Yoon Y.	Biosensors (Basel)	10.3390/bios14110547	2024
Metabolism	Investigating Lipid and Energy Dyshomeostasis Induced by Per- and Polyfluoroalkyl Substances (PFAS) Congeners in Mouse Model Using Systems Biology Approaches.	Gabal E, Azaizeh M, Baloni P.	Metabolites	10.3390/metabo15080499	2025
	Structural evolution of nitrogenase over 3 billion years.	Cuevas Zuviria B, Detemple F, Amritkar K, Garcia AK, Seefeldt L, Einsle O, Kacar B.	Elife	10.7554/elife.105613	2025
	Mechanistic evaluation of the exoelectrogenic activity of Rhodopseudomonas palustris under different nitrogen regimes.	Pankan AO, Yunus K, Fisher AC.	Bioresour Technol	10.1016/j.biortech.2019.122637	2020
	Azotobacter vinelandii N₂ fixation increases in co-culture with the PGPR Bacillus subtilis in a nitrogen concentration-dependent manner.	Leroux J, Beauregard PB, Bellenger J-P.	Appl Environ Microbiol	10.1128/aem.01528-24	2024
	Analysis of Mechanisms for Electron Uptake by Methanothrix harundinacea 6Ac During Direct Interspecies Electron Transfer.	Wang L, Shan X, Xu Y, Xi Q, Jiang H, Li X.	Int J Mol Sci	10.3390/ijms26094195	2025
Phylogeny	The genome sequence of the giant phototrophic gammaproteobacterium Thiospirillum jenense gives insight into its physiological properties and phylogenetic relationships.	Imhoff JF, Meyer TE, Kyndt JA.	Arch Microbiol	10.1007/s00203-020-02006-7	2021
	A photosynthetic bacterial inoculant exerts beneficial effects on the yield and quality of tomato and affects bacterial community structure in an organic field.	Lee SK, Chiang MS, Hseu ZY, Kuo CH, Liu CT.	Front Microbiol	10.3389/fmicb.2022.959080	2022
Phylogeny	Molecular characterization, expression and functional analysis of TGFbeta1-b in crucian carp (Carassius carassius).	Li C, Wang L.	Int J Biol Macromol	10.1016/j.ijbiomac.2020.10.024	2020
	Enhancing physico-chemical water quality in recycled dairy effluent through microbial consortium treatment.	Velmurugan L, Pandian KD.	Heliyon	10.1016/j.heliyon.2024.e39501	2024
	Beneficial effect of Rhodopseudomonas palustris on in vitro rumen digestion and fermentation.	Chen YY, Wang YL, Wang WK, Zhang ZW, Si XM, Cao ZJ, Li SL, Yang HJ.	Benef Microbes	10.3920/bm2019.0044	2020
	The Role of Glutamine Synthetase in Regulating Ammonium Assimilation and Iron-Only Nitrogenase Expression in a Photosynthetic Diazotroph.	Jiang M, Zhao D, Huang L, Zeng Y, Liu J, Xiang H, Zheng Y.	Microbiol Spectr	10.1128/spectrum.04953-22	2023
	The phototrophic purple non-sulfur bacteria Rhodomicrobium spp. are novel chassis for bioplastic production.	Conners EM, Rengasamy K, Ranaivoarisoa T, Bose A.	Microb Biotechnol	10.1111/1751-7915.14552	2024
	Enhancing the Light Coverage of Photosynthetic Bacteria to Augment Photosynthesis by Conjugated Polymer Nanoparticles.	Wang Z, Gao D, Zhan Y, Xing C.	ACS Appl Bio Mater	10.1021/acsabm.0c00352	2020
	Biodegradation of hexabromocyclododecane by Rhodopseudomonas palustris YSC3 strain: A free-living nitrogen-fixing bacterium isolated in Taiwan.	Chang TH, Wang R, Peng YH, Chou TH, Li YJ, Shih YH.	Chemosphere	10.1016/j.chemosphere.2019.125621	2020
Enzymology	A Practical Guide for the Quality Evaluation of Fluobodies/Chromobodies.	Strancar U, D'Ercole C, Cikatricisova L, Nakic M, De March M, de Marco A.	Biomolecules	10.3390/biom14050587	2024
Enzymology	Redox Properties of Bacillus subtilis Ferredoxin:NADP⁺ Oxidoreductase: Potentiometric Characteristics and Reactions with Pro-Oxidant Xenobiotics.	Lesanavicius M, Seo D, Maurutyte G, Cenas N.	Int J Mol Sci	10.3390/ijms25105373	2024
	Full quantitative resource utilization of raw mustard waste through integrating a comprehensive approach for producing hydrogen and soil amendments.	Zhou L, Sun J, Xu X, Ma M, Li Y, Chen Q, Su H.	Microb Cell Fact	10.1186/s12934-023-02293-x	2024
Metabolism	Escherichia coli is poised to grow using 5'-deoxynucleosides via MtnR and CRP regulation of DHAP shunt gene expression.	Huening KA, Wingerd CC, Groves JT, Kapusta KT, Khan L, Tabita FR, North JA.	J Bacteriol	10.1128/jb.00280-25	2025
	Temperature mediates biodiversity and metabolism of culturable lignocellulose-degrading consortia from intertidal wetlands.	Chen J, Yang M, Tu Q, Lin L.	ISME J	10.1093/ismejo/wraf218	2025
	Black Soldier Fly (Hermetia illucens) Microbiome and Microbe Interactions: A Scoping Review.	Lin SW, Shelomi M.	Animals (Basel)	10.3390/ani14223183	2024
Enzymology	Foliar Application of Rhodopseudomonas palustris Enhances the Rice Crop Growth and Yield under Field Conditions.	Yen KS, Sundar LS, Chao YY.	Plants (Basel)	10.3390/plants11192452	2022
	Composition and rhythmic variations in the microbiome of Southwestern Atlantic corals.	Seiblitz IGL, Capel KCC, Oliveira RR, Zilberberg C, Cordeiro CAMM, Francini CLB, Zanotti AA, Ciotti AM, Kitahara MV.	Environ Microbiome	10.1186/s40793-025-00725-2	2025
Proteome	Simultaneous functioning of different light-harvesting complexes-a strategy of adaptation of purple bacterium Rhodopseudomonas palustris to low illumination conditions.	Serdyuk OP, Abdullatypov AV, Smolygina LD, Ashikhmin AA, Bolshakov MA.	PeerJ	10.7717/peerj.14769	2023
Metabolism	Kinetic and structural insight into a role of the re-face Tyr328 residue of the homodimer type ferredoxin-NADP⁺ oxidoreductase from Rhodopseudomonas palustris in the reaction with NADP⁺/NADPH.	Seo D, Muraki N, Kurisu G.	Biochim Biophys Acta Bioenerg	10.1016/j.bbabio.2019.148140	2020
Enzymology	Nitrate-dependent antimony oxidase in an uncultured Symbiobacteriaceae member.	Wang L, Yin Z, Yan W, Hao J, Tian F, Shi J.	ISME J	10.1093/ismejo/wrae204	2024
	Characterization of Microbiome Diversity in the Digestive Tract of Penaeus vannamei Fed with Probiotics and Challenged with Vibrio parahaemolyticus Acute Hepatopancreatic Necrosis Disease.	Galaviz-Silva L, Rodriguez de la Fuente AO, Gomez-Flores R, Ibarra-Gamez JC, Luna-Cruz IE, Elizondo-Luevano JH, Sanchez-Diaz R, Molina Garza ZJ.	Pathogens	10.3390/pathogens14040320	2025
	Effects of light intensity and photoperiod on pigments production and corresponding key gene expression of Rhodopseudomonas palustris in a photobioreactor system.	Liu S, Daigger GT, Kang J, Zhang G.	Bioresour Technol	10.1016/j.biortech.2019.122172	2019
	Gut bacterium Acinetobacter sp. assists Camellia weevil with host plant adaptation by degrading tea saponin via the benzoate pathway.	Song F, Shu J, Zhang S.	Microbiome	10.1186/s40168-025-02131-9	2025
	Green alternatives to petroleum-based plastics: production of bioplastic from Pseudomonas neustonica strain NGB15 using waste carbon source.	Baltaci NG, Baltaci MO, Gormez A, Ortucu S.	Environ Sci Pollut Res Int	10.1007/s11356-024-33309-7	2024
Metabolism	Fermentative Escherichia coli makes a substantial contribution to H2 production in coculture with phototrophic Rhodopseudomonas palustris.	Sangani AA, McCully AL, LaSarre B, McKinlay JB.	FEMS Microbiol Lett	10.1093/femsle/fnz162	2019
	High Fluorescence of Phytochromes Does Not Require Chromophore Protonation.	Katz S, Phan HT, Rieder F, Seifert F, Pietzsch M, Laufer J, Schmitt FJ, Hildebrandt P.	Molecules	10.3390/molecules29204948	2024
	Biochar and Bacillus subtilis co-drive dryland soil microbial community and enzyme responses.	Zheng T, Huang X, Zhou X, Wu J, Kamran MA, Yu X, Qian J.	Front Microbiol	10.3389/fmicb.2025.1603488	2025
Enzymology	Structural Perturbations of Rhodopseudomonas palustris Form II RuBisCO Mutant Enzymes That Affect CO₂ Fixation.	Satagopan S, North JA, Arbing MA, Varaljay VA, Haines SN, Wildenthal JA, Byerly KM, Shin A, Tabita FR.	Biochemistry	10.1021/acs.biochem.9b00617	2019
Enzymology	Thioredoxin Reductase-Type Ferredoxin: NADP⁺ Oxidoreductase of Rhodopseudomonas palustris: Potentiometric Characteristics and Reactions with Nonphysiological Oxidants.	Lesanavicius M, Seo D, Cenas N.	Antioxidants (Basel)	10.3390/antiox11051000	2022
	Soil microbial CO₂ fixation rate disparities with different vegetation at a representative acidic red soil experimental station in China.	Long C, Liu Z, Liu R, Yin L, Tan F, Wang Y, He G.	Front Microbiol	10.3389/fmicb.2024.1480484	2024
	Quorum Sensing Is Required for the Colony Establishment of a Plant Phyllosphere Bacterium Rhodopseudomonas palustris Strain GJ-22.	Zhang W, Peng Q, Chen L, Gu Z, Liu Z, Zhang D, Cheng J, Zheng L, Chen A, Liu Y, Su P.	Appl Environ Microbiol	10.1128/aem.00487-23	2023
	Single Phototrophic Bacterium-Mediated Iron Cycling in Aquatic Environments.	Wang KL, Ma X, Li DB, Qi YL, Hua ZS, Tian T, Liu DF, Min D, Li WW, Huang GX, Yu HQ.	Research (Wash D C)	10.34133/research.0528	2024
Metabolism	Using high-throughput transcriptome sequencing to investigate the biotransformation mechanism of hexabromocyclododecane with Rhodopseudomonas palustris in water.	Wang R, Lin CY, Chen SH, Lo KJ, Liu CT, Chou TH, Shih YH.	Sci Total Environ	10.1016/j.scitotenv.2019.07.140	2019
	Photomorphogenesis of Myxococcus macrosporus: new insights for light-regulation of cell development.	Graniczkowska KB, Bizhga D, Noda M, Leon V, Saraf N, Feliz D, Sharma G, Nugent AC, Singer M, Stojkovic EA.	Photochem Photobiol Sci	10.1007/s43630-024-00635-1	2024
Enzymology	Preparation and biological activities of an extracellular polysaccharide from Rhodopseudomonas palustris.	Zhang P, Sun F, Cheng X, Li X, Mu H, Wang S, Geng H, Duan J.	Int J Biol Macromol	10.1016/j.ijbiomac.2019.03.139	2019
Enzymology	Enhanced removal of veterinary antibiotic from wastewater by photoelectroactive biofilm of purple anoxygenic phototroph through photosynthetic electron uptake.	Sun J, Yang P, Huang S, Li N, Zhang Y, Yuan Y, Lu X.	Sci Total Environ	10.1016/j.scitotenv.2020.136605	2020
Phylogeny	Isolation, Molecular Identification and Amino Acid Profiling of Single-Cell-Protein-Producing Phototrophic Bacteria Isolated from Oil-Contaminated Soil Samples.	Nalvothula R, Challa S, Peddireddy V, Merugu R, Rudra MPP, Alataway A, Dewidar AZ, Elansary HO.	Molecules	10.3390/molecules27196265	2022
	RETRACTED: Clothianidin wastewater treatment and the accumulation of high-value biochemical by Rhodopseudomonas spheroides.	Wu P, Zhang Q, Wang Y, Zhang Y, Chen Z, Cao B, Wu Y, Zhu F, Li N.	Bioresour Technol	10.1016/j.biortech.2019.122073	2019
	Purple bacteria as added-value protein ingredient in shrimp feed: Penaeus vannamei growth performance, and tolerance against Vibrio and ammonia stress	Alloul A, Wille M, Lucenti P, Bossier P, Van Stappen G, Vlaeminck SE.	Aquaculture		2020
	The effect of diurnal light cycles on biohydrogen production in a thermosiphon photobioreactor.	Bosman CE, van Wyk P, Pott RWM, Bradshaw SM.	AMB Express	10.1186/s13568-023-01534-x	2023
	The genome-scale metabolic model for the purple non-sulfur bacterium Rhodopseudomonas palustris Bis A53 accurately predicts phenotypes under chemoheterotrophic, chemoautotrophic, photoheterotrophic, and photoautotrophic growth conditions.	Tec-Campos D, Posadas C, Tibocha-Bonilla JD, Thiruppathy D, Glonek N, Zuniga C, Zepeda A, Zengler K.	PLoS Comput Biol	10.1371/journal.pcbi.1011371	2023
	Uptake system of lignin-derived aromatic acids in promising Sphingomonadaceae strains for lignin valorization through biological funneling.	Fujita M, Hirano R, Nagayoshi K, Kamimura N, Masai E.	Sci Rep	10.1038/s41598-025-08757-x	2025
	Enhancing thermostability and removing hemin inhibition of Rhodopseudomonas palustris 5-aminolevulinic acid synthase by computer-aided rational design	Tan Z, Zhao J, Chen J, Rao D, Zhou W, Chen N, Zheng P, Sun J, Ma Y.	Biotechnol Lett		2019
	Pyrite stimulates the growth and sulfur oxidation capacity of anoxygenic phototrophic sulfur bacteria in euxinic environments.	Li R, Liu X, Wu G, Li G, Chen JH, Jiang H, Dong H.	Sci Adv	10.1126/sciadv.adu7080	2025
	Fermi calculations enable quick downselection of target genes and process optimization in photosynthetic systems.	Chowdhury R, Schroeder W, Sarkar D, Chowdhury NB, Dey S, Saha R.	Plant Physiol	10.1093/plphys/kiaf103	2025
	Bacteria-based multiplex system eradicates recurrent infections with drug-resistant bacteria via photothermal killing and protective immunity elicitation.	Xu Y, Wu Y, Hu Y, Xu M, Liu Y, Ding Y, Chen J, Huang X, Wen L, Li J, Zhu C.	Biomater Res	10.1186/s40824-023-00363-0	2023
	Anoxygenic phototrophic purple non-sulfur bacteria: tool for bioremediation of hazardous environmental pollutants.	Dhar K, Venkateswarlu K, Megharaj M.	World J Microbiol Biotechnol	10.1007/s11274-023-03729-7	2023
Metabolism	Engineering the transcriptional activator NifA for the construction of Rhodobacter sphaeroides strains that produce hydrogen gas constitutively.	Shimizu T, Teramoto H, Inui M.	Appl Microbiol Biotechnol	10.1007/s00253-019-10199-1	2019
	Arsenite Methyltransferase Diversity and Optimization of Methylation Efficiency.	Chen J, Rosen BP.	Environ Sci Technol	10.1021/acs.est.3c00966	2023
	Investigation of the requirements for efficient and selective cytochrome P450 monooxygenase catalysis across different reactions.	Podgorski MN, Coleman T, Chao RR, De Voss JJ, Bruning JB, Bell SG.	J Inorg Biochem	10.1016/j.jinorgbio.2019.110913	2020
	A comparative study of the effects of microbial agents and anaerobic sludge on microalgal biotransformation into organic fertilizer.	Liu G, Li T, Ning X, Bi X.	J Environ Manage	10.1016/j.jenvman.2019.06.020	2019
Metabolism	Biodegradation mechanism of polyesters by hydrolase from Rhodopseudomonas palustris: An in silico approach.	Wang X, Chen J, Tang X, Wang J, Zhu L, Zhang W, Wang H, Li Y, Zhang Q.	Chemosphere	10.1016/j.chemosphere.2019.05.112	2019
	The influence of probiotic administration on selected leukocyte subpopulations and the serum amyloid A concentration in the peripheral blood of dairy cows during different lactation periods.	Brodzki P, Marczuk J, Gorzkos H, Lisiecka U, Szczubial M, Brodzki A, Dabrowski R, Krakowski L, Glodkowska K, Brodzki N.	J Vet Res	10.2478/jvetres-2024-0057	2024
	Probing the Dual Role of Ca²⁺ in the Allochromatium tepidum LH1-RC Complex by Constructing and Analyzing Ca²⁺-Bound and Ca²⁺-Free LH1 Complexes.	Zou MJ, Sun S, Wang GL, Yan YH, Ji W, Wang-Otomo ZY, Madigan MT, Yu LJ.	Biomolecules	10.3390/biom15010124	2025
Metabolism	Biophysical Techniques for Distinguishing Ligand Binding Modes in Cytochrome P450 Monooxygenases.	Podgorski MN, Harbort JS, Coleman T, Stok JE, Yorke JA, Wong LL, Bruning JB, Bernhardt PV, De Voss JJ, Harmer JR, Bell SG.	Biochemistry	10.1021/acs.biochem.0c00027	2020
	Effects of Microorganisms on Growth Performance, Body Composition, Digestive Enzyme Activity, Intestinal Bacteria Flora and Antimicrobial Peptide (AMP) Content of Black Soldier Fly Larvae (Hermetia illucens).	Meng Y, Zhang X, Zhang Z, Li J, Zheng P, Li J, Xu J, Xian J, Lu Y.	Animals (Basel)	10.3390/ani13172722	2023
	Bacterial adenine cross-feeding stems from a purine salvage bottleneck.	Chuang YC, Haas NW, Pepin R, Behringer MG, Oda Y, LaSarre B, Harwood CS, McKinlay JB.	ISME J	10.1093/ismejo/wrae034	2024
	Synthetic microbe-to-plant communication channels.	Boo A, Toth T, Yu Q, Pfotenhauer A, Fields BD, Lenaghan SC, Stewart CN, Voigt CA.	Nat Commun	10.1038/s41467-024-45897-6	2024
	Membrane-Bound Bacteriophytochrome-Like Complex of Phototrophic Purple Non-Sulfur Bacterium Rhodopseudomonas palustris.	Serdyuk OP, Smolygina LD, Khristin MS.	Dokl Biochem Biophys	10.1134/s1607672918050149	2018
Metabolism	Nitrogen fixation in Rhodopseudomonas palustris co-cultured with Bacillus subtilis in the presence of air.	Arashida H, Kugenuma T, Watanabe M, Maeda I.	J Biosci Bioeng	10.1016/j.jbiosc.2018.10.010	2019
	Ingestion Rate, Prey Selectivity, and Growth of Larval Vieja zonata (Teleostei: Cichlidae) Co-Fed Rotifers with Cladocerans.	Contreras-Tapia RA, Garza-Mourino G, Castellanos-Paez ME, Castillo-Rivera M, S N, Miron MIB.	Aquac Nutr	10.1155/2024/6424063	2024
Pathogenicity	Fungal and bacterial species richness in biodeteriorated seventeenth century Venetian manuscripts.	Stratigaki M, Armirotti A, Ottonello G, Manente S, Traviglia A.	Sci Rep	10.1038/s41598-024-57228-2	2024
Genetics	Genomic highlights of the phylogenetically unique halophilic purple nonsulfur bacterium, Rhodothalassium salexigens.	Madigan MT, Bender KS, Parenteau MN, Kimura Y, Wang-Otomo ZY, Sattley WM.	Extremophiles	10.1007/s00792-025-01380-8	2025
Genetics	Genomic insights into key mechanisms for carbon, nitrogen, and phosphate assimilation by the acidophilic, halotolerant genus Acidihalobacter members.	Khaleque HN, Fathollahzadeh H, Kaksonen AH, Valdes J, Vergara E, Holmes DS, Watkin ELJ.	FEMS Microbiol Ecol	10.1093/femsec/fiae145	2024
	Iron Sequestration by Galloyl-Silane Nano Coatings Inhibits Biofilm Formation of Sulfitobacter sp.	Messersmith RE, Sage FC, Johnson JK, Langevin SA, Forsyth ER, Hart MT, Hoffman CM.	Biomimetics (Basel)	10.3390/biomimetics8010079	2023
	Primary production by the purple nonsulfur bacterium Rhodopila globiformis in an acidic, moderately sulfidic warm spring.	Fecteau KM, Weeks KM, Debes RV, Barnes TJ, Robinson KJ, Nye JJ, Lindsay MR, Boyd ES, Shock EL.	Appl Environ Microbiol	10.1128/aem.01217-25	2025
	The Influence of Exogenous CdS Nanoparticles on the Growth and Carbon Assimilation Efficiency of Escherichia coli.	Yang K, Yang Y, Wang J, Huang X, Cui D, Zhao M.	Biology (Basel)	10.3390/biology13100847	2024
	A Thermosiphon Photobioreactor for Photofermentative Hydrogen Production by Rhodopseudomonas palustris.	Bosman CE, McClelland Pott RW, Bradshaw SM.	Bioengineering (Basel)	10.3390/bioengineering9080344	2022
Enzymology	Enhancing thermostability and removing hemin inhibition of Rhodopseudomonas palustris 5-aminolevulinic acid synthase by computer-aided rational design.	Tan Z, Zhao J, Chen J, Rao D, Zhou W, Chen N, Zheng P, Sun J, Ma Y.	Biotechnol Lett	10.1007/s10529-018-2627-z	2019
Enzymology	Free Radical Production Induced by Nitroimidazole Compounds Lead to Cell Death in Leishmania infantum Amastigotes.	Andres-Rodriguez J, Gonzalez-Montero MC, Garcia-Fernandez N, Calvo-Alvarez E, Perez-Pertejo MY, Reguera-Torres RM, Balana-Fouce R, Garcia-Estrada C.	Molecules	10.3390/molecules29174041	2024
Metabolism	Differences in possible TCA cycle replenishing pathways in purple non-sulfur bacteria possessing glyoxylate pathway.	Petushkova E, Iuzhakov S, Tsygankov A.	Photosynth Res	10.1007/s11120-018-0581-1	2019
	Does pre-enrichment of anodes with acetate to select for Geobacter spp. enhance performance of microbial fuel cells when switched to more complex substrates?	Christgen B, Spurr M, Milner EM, Izadi P, McCann C, Yu E, Curtis T, Scott K, Head IM.	Front Microbiol	10.3389/fmicb.2023.1199286	2023
	Enhanced CO₂ reduction and valuable C₂₊ chemical production by a CdS-photosynthetic hybrid system.	Wang B, Jiang Z, Yu JC, Wang J, Wong PK.	Nanoscale	10.1039/c9nr02896j	2019
	PioABC-Dependent Fe(II) Oxidation during Photoheterotrophic Growth on an Oxidized Carbon Substrate Increases Growth Yield.	Haas NW, Jain A, Hying Z, Arif SJ, Niehaus TD, Gralnick JA, Fixen KR.	Appl Environ Microbiol	10.1128/aem.00974-22	2022
Metabolism	Rhodopseudomonas palustris wastewater treatment: Cyhalofop-butyl removal, biochemicals production and mathematical model establishment.	Wu P, Chen Z, Zhang Y, Wang Y, Zhu F, Cao B, Wu Y, Li N.	Bioresour Technol	10.1016/j.biortech.2018.11.087	2019
	The draft genome of Andean Rhodopseudomonas sp. strain AZUL predicts genome plasticity and adaptation to chemical homeostasis.	Guardia AE, Wagner A, Busalmen JP, Di Capua C, Cortez N, Beligni MV.	BMC Microbiol	10.1186/s12866-022-02685-w	2022
	Advances in Research on Bacterial Oxidation of Mn(II): A Visualized Bibliometric Analysis Based on CiteSpace.	Mo W, Wang H, Wang J, Wang Y, Liu Y, Luo Y, He M, Cheng S, Mei H, He J, Su J.	Microorganisms	10.3390/microorganisms12081611	2024
	Impact of effective micro-organisms (EM) on the yield, growth and bio-chemical properties of lettuce when applied to soil and leaves.	Demir H, Saka AK, Ucan U, Akgun IH, Yalci HK.	BMC Plant Biol	10.1186/s12870-024-05980-y	2024
Metabolism	A New Mechanism for High-Affinity Uptake of C4-Dicarboxylates in Bacteria Revealed by the Structure of Rhodopseudomonas palustris MatC (RPA3494), a Periplasmic Binding Protein of the Tripartite Tricarboxylate Transporter (TTT) Family.	Rosa LT, Dix SR, Rafferty JB, Kelly DJ.	J Mol Biol	10.1016/j.jmb.2018.11.016	2019
	Development of zero discharge net flow fluid dynamic gauging for studying biofilm and spore removal	Wang S, Xu Zhou K, Christie G, Wilson DI.	Food and bioproducts processing : transactions of the Institution of Chemical Engineers, Part C.	10.1016/j.fbp.2018.08.008	2019
Genetics	Complex evolutionary history of photosynthesis in Bradyrhizobium.	Avontuur JR, Wilken PM, Palmer M, Coetzee MPA, Stepkowski T, Venter SN, Steenkamp ET.	Microb Genom	10.1099/mgen.0.001105	2023
	Resveratrol Improves the Digestive Ability and the Intestinal Health of Siberian Sturgeon.	Yang S, Xu W, Feng L, Zhang C, Yan C, Zhang J, Lai J, Yan T, He Z, Du X, Du Z, Luo W, Huang X, Wu J, Li Y.	Int J Mol Sci	10.3390/ijms231911977	2022
	Tracing microbial communities associated with archaeological human samples in Latvia, 7-11th centuries AD.	Kimsis J, Poksane A, Kazarina A, Vilcane A, Petersone-Gordina E, Zayakin P, Gerhards G, Ranka R.	Environ Microbiol Rep	10.1111/1758-2229.13157	2023
Metabolism	Time-Resolved Study of Interprotein Signaling Process of a Blue Light Sensor PapB-PapA Complex.	Nakasone Y, Kikukawa K, Masuda S, Terazima M.	J Phys Chem B	10.1021/acs.jpcb.9b00196	2019
Metabolism	The C-terminal domain of HpDprA is a DNA-binding winged helix domain that does not bind double-stranded DNA.	Lisboa J, Celma L, Sanchez D, Marquis M, Andreani J, Guerois R, Ochsenbein F, Durand D, Marsin S, Cuniasse P, Radicella JP, Quevillon-Cheruel S.	FEBS J	10.1111/febs.14788	2019
Metabolism	Stereochemical Insights into the Anaerobic Degradation of 4-Isopropylbenzoyl-CoA in the Denitrifying Bacterium Strain pCyN1.	Kuppers J, Becker P, Jarling R, Dorries M, Cakic N, Schmidtmann M, Christoffers J, Rabus R, Wilkes H.	Chemistry	10.1002/chem.201805837	2019
	Spike-in genomic DNA for validating performance of metagenomics workflows.	Venkataraman A, Parlov M, Hu P, Schnell D, Wei X, Tiesman JP.	Biotechniques	10.2144/btn-2018-0089	2018
	The quest for environmental analytical microbiology: absolute quantitative microbiome using cellular internal standards.	Wang C, Yang Y, Xu X, Wang D, Shi X, Liu L, Deng Y, Li L, Zhang T.	Microbiome	10.1186/s40168-024-02009-2	2025
	Effects of potassium-solubulizing and photosynthetic bacteria on tolerance to salt stress in maize.	Feng K, Cai Z, Ding T, Yan H, Liu X, Zhang Z.	J Appl Microbiol	10.1111/jam.14220	2019
	Development of an Engineered Bacterial Endophyte: Promoting Plant Growth Through Pyrroloquinoline Quinone (PQQ) Synthesis.	Fang T, Lo SC, Yu YN, Sou NL, Hung SW, Peng JH, Chiang EI, Huang CC.	Microorganisms	10.3390/microorganisms13020293	2025
	Mode of autophosphorylation in bacteriophytochromes RpBphP2 and RpBphP3.	Kumarapperuma I, Tom IP, Bandara S, Montano S, Yang X.	Photochem Photobiol Sci	10.1007/s43630-023-00366-9	2023
	Al3+ and Fe2+ toxicity reduction potential by acid-resistant strains of Rhodopseudomonas palustris isolated from acid sulfate soils under acidic conditions	Nguyen K, Kantachote D, Onthong J, Sukhoom A.	Ann Microbiol	10.1007/s13213-018-1332-4	2018
Metabolism	The purple non-sulfur bacterium Rhodopseudomonas palustris produces novel petrobactin-related siderophores under aerobic and anaerobic conditions.	Baars O, Morel FMM, Zhang X.	Environ Microbiol	10.1111/1462-2920.14078	2018
Enzymology	Modelling Selective CO₂ Absorption and Validation via Photosynthetic Bacteria and Chemical Adsorbents for Methane Purification in Anaerobic Fermentation Bioreactors.	Hsu YC, Wu S, Chiu JY, Thenuwara HN, Senevirathna HL, Wu P.	Materials (Basel)	10.3390/ma16196533	2023
	Effects on survival and bacterial community composition of the aquaculture water and gastrointestinal tract of shrimp (Litopenaeus vannamei) exposed to probiotic treatments after an induced infection of acute hepatopancreatic necrosis disease	Pinoargote G, Flores G, Cooper SK, Ravishankar S.	Aquac Res	10.1111/are.13791	2018
	Differential diversity and structure of autotrophs in agricultural soils of Qinghai Province.	Zhou L, Ma X, Luo Q, Qiao F, Xie H, Wang L, Sun W, Liu Y, Ma Y.	Microbiol Spectr	10.1128/spectrum.02693-24	2025
	Rational engineering of Halomonas salifodinae to enhance hydroxyectoine production under lower-salt conditions.	Yang N, Liu M, Han J, Jiang M, Zeng Y, Liu Y, Xiang H, Zheng Y.	Appl Microbiol Biotechnol	10.1007/s00253-024-13197-0	2024
	Nitrogen fertilizer improves Salix matsudana growth and soil qualities	Wang Q, Niu X, Huang S, Di D, Su B, Yuan Y, Wu Y, Huang D.	Front Microbiol		2025
Metabolism	GNAT family Pat2 is required for long-term survival on glycerol and catalyzes lysine acetylation of glycerol kinase in hypersaline-adapted archaea.	Judd HN, Sanchez KM, Dublino LS, Zhang GJ, Yu D, Gal D, Couto-Rodriguez RL, Wang X, Maupin-Furlow JA.	mBio	10.1128/mbio.02514-25	2025
	Enhancement of photo-driven biomethanation under visible light by nano-engineering of Rhodopseudomonas palustris.	Chen MY, Fang Z, Xu LX, Zhou D, Yang XJ, Zhu HJ, Yong YC.	Bioresour Bioprocess	10.1186/s40643-021-00383-5	2021
	Interactions of Brominated Flame Retardants with Membrane Models of Dehalogenating Bacteria: Langmuir Monolayer and Grazing Incidence X-ray Diffraction Studies.	Broniatowski M, Wydro P.	Langmuir	10.1021/acs.langmuir.4c00518	2024
	Insight into the soil bacterial community succession of Nicotiana benthamiana in response to Tobacco mosaic virus.	Zhao Y, Liu T, Wu S, Zhang D, Xiao Z, Ren Z, Li L, Liu S, Xiao Y, Tang Q.	Front Microbiol	10.3389/fmicb.2024.1341296	2024
	Redox poise in R. rubrum phototrophic growth drives large-scale changes in macromolecular pathways.	Cannon WR, King E, Huening KA, North JA.	PLoS Comput Biol	10.1371/journal.pcbi.1013015	2025
	Volatile fatty acids impacting phototrophic growth kinetics of purple bacteria: Paving the way for protein production on fermented wastewater.	Alloul A, Wuyts S, Lebeer S, Vlaeminck SE.	Water Res	10.1016/j.watres.2018.12.025	2019
Genetics	Nitrogen Fixation Activity and Genome Analysis of a Moderately Haloalkaliphilic Anoxygenic Phototrophic Bacterium Rhodovulum tesquicola.	Komova AV, Bakhmutova ED, Izotova AO, Kochetova ES, Toshchakov SV, Namsaraev ZB, Golichenkov MV, Korzhenkov AA.	Microorganisms	10.3390/microorganisms10081615	2022
	Multi-color fluorescence live-cell imaging in Dictyostelium discoideum.	Hashimura H, Kuwana S, Nakagawa H, Abe K, Adachi T, Sugita T, Fujishiro S, Honda G, Sawai S.	Cell Struct Funct	10.1247/csf.24065	2024
Metabolism	The path of electron transfer to nitrogenase in a phototrophic alpha-proteobacterium.	Fixen KR, Pal Chowdhury N, Martinez-Perez M, Poudel S, Boyd ES, Harwood CS.	Environ Microbiol	10.1111/1462-2920.14262	2018
	Engineering artificial photosynthesis based on rhodopsin for CO₂ fixation.	Tu W, Xu J, Thompson IP, Huang WE.	Nat Commun	10.1038/s41467-023-43524-4	2023
Enzymology	Structural characterization and dynamics of AdhE ultrastructures from Clostridium thermocellum show a containment strategy for toxic intermediates.	Ziegler SJ, Knott BC, Gruber JN, Hengge NN, Xu Q, Olson DG, Romero EE, Joubert LM, Bomble YJ.	Elife	10.7554/elife.96966	2025
	Cryo-EM structures of light-harvesting 2 complexes from Rhodopseudomonas palustris reveal the molecular origin of absorption tuning.	Qian P, Nguyen-Phan CT, Gardiner AT, Croll TI, Roszak AW, Southall J, Jackson PJ, Vasilev C, Castro-Hartmann P, Sader K, Hunter CN, Cogdell RJ.	Proc Natl Acad Sci U S A	10.1073/pnas.2210109119	2022
	Multi-modular metabolic engineering of heme synthesis in Corynebacterium glutamicum.	Yang Q, Sun X, Wang H, Chen T, Wang Z.	Synth Syst Biotechnol	10.1016/j.synbio.2024.02.008	2024
	Bradyrhizobium japonicum HmuP is an RNA-binding protein that positively controls hmuR operon expression by suppression of a negative regulatory RNA element in the 5' untranslated region.	Wu P, Ong A, O'Brian MR.	Mol Microbiol	10.1111/mmi.15274	2024
	Regulation of bacterial stringent response by an evolutionarily conserved ribosomal protein L11 methylation.	Walukiewicz HE, Farris Y, Burnet MC, Feid SC, You Y, Kim H, Bank T, Christensen D, Payne SH, Wolfe AJ, Rao CV, Nakayasu ES.	mBio	10.1128/mbio.01773-24	2024
	Diel Cycle Proteomics: Illuminating Molecular Dynamics in Purple Bacteria for Optimized Biotechnological Applications.	Matallana-Surget S, Geron A, Decroo C, Wattiez R.	Int J Mol Sci	10.3390/ijms25052934	2024
	ATP Is a Major Determinant of Phototrophic Bacterial Longevity in Growth Arrest.	Yin L, Ma H, Fones EM, Morris DR, Harwood CS.	mBio	10.1128/mbio.03609-22	2023
Metabolism	Lipid-Controlled Stabilization of Charge-Separated States (P⁺Q_B^-) and Photocurrent Generation Activity of a Light-Harvesting-Reaction Center Core Complex (LH1-RC) from Rhodopseudomonas palustris.	Noji T, Matsuo M, Takeda N, Sumino A, Kondo M, Nango M, Itoh S, Dewa T.	J Phys Chem B	10.1021/acs.jpcb.7b09973	2018
	Powering the Future: Unveiling the Secrets of Semiconductor Biointerfaces in Biohybrids for Semiartificial Photosynthesis.	Burns C, Gibson EA, Fuller L, Kalathil S.	Artif Photosynth	10.1021/aps.4c00008	2025
	Enzymatic carbon-fluorine bond cleavage by human gut microbes.	Probst SI, Felder FD, Poltorak V, Mewalal R, Blaby IK, Robinson SL.	Proc Natl Acad Sci U S A	10.1073/pnas.2504122122	2025
	Soil P-stimulating bacterial communities: response and effect assessment of long-term fertilizer and rhizobium inoculant application.	Wei W, Ma M, Jiang X, Meng F, Cao F, Chen H, Guan D, Li L, Li J.	Environ Microbiome	10.1186/s40793-024-00633-x	2024
Metabolism	Structural basis for high-affinity adipate binding to AdpC (RPA4515), an orphan periplasmic-binding protein from the tripartite tricarboxylate transporter (TTT) family in Rhodopseudomonas palustris.	Rosa LT, Dix SR, Rafferty JB, Kelly DJ.	FEBS J	10.1111/febs.14304	2017
	Effect of deep eutectic solvent pretreatment on biohydrogen production from corncob: pretreatment temperature and duration.	Zhou X, Li F, Li C, Li Y, Jiang D, Zhang T, Lu C, Zhang Q, Jing Y.	Bioengineered	10.1080/21655979.2023.2252218	2023
Metabolism	Biotransformation of water lettuce (Pistia stratiotes) to biohydrogen by Rhodopseudomonas palustris.	Corneli E, Adessi A, Olguin EJ, Ragaglini G, Garcia-Lopez DA, De Philippis R.	J Appl Microbiol	10.1111/jam.13599	2017
	Microbial photoelectrosynthesis: Feeding purple phototrophic bacteria electricity to produce bacterial biomass.	Manchon C, Muniesa-Merino F, Llorente M, Esteve-Nunez A.	Microb Biotechnol	10.1111/1751-7915.14190	2023
	Draft Whole-Genome Sequence of the Purple Photosynthetic Bacterium Rhodopseudomonas palustris XCP.	Rayyan A, Meyer T, Kyndt J.	Microbiol Resour Announc	10.1128/mra.00855-18	2018
	Two Key Ferredoxins for Nitrogen Fixation Have Different Specificities and Biophysical Properties.	Addison H, Pfister P, Lago-Maciel A, Erb TJ, Pierik AJ, Rebelein JG.	Chemistry	10.1002/chem.202500844	2025
	Application of Rice Straw Inhibits Clubroot Disease by Regulating the Microbial Community in Soil.	Han Z, Zhang Y, Di C, Bi H, Pan K.	Microorganisms	10.3390/microorganisms12040717	2024
	Quantification of biological nitrogen fixation by Mo-independent complementary nitrogenases in environmental samples with low nitrogen fixation activity.	Haynes SJ, Darnajoux R, Han E, Oleynik S, Zimble E, Zhang X.	Sci Rep	10.1038/s41598-022-24860-9	2022
	The link between ancient microbial fluoride resistance mechanisms and bioengineering organofluorine degradation or synthesis.	Stockbridge RB, Wackett LP.	Nat Commun	10.1038/s41467-024-49018-1	2024
	A Red Fluorescent Protein Reporter System Developed for Measuring Gene Expression in Photosynthetic Bacteria under Anaerobic Conditions.	Jiang M, Zeng Y, Cui L, Wang M, Zheng Y.	Microorganisms	10.3390/microorganisms10020201	2022
Enzymology	A broad specificity beta-propeller enzyme from Rhodopseudomonas palustris that hydrolyzes many lactones including gamma-valerolactone.	Hall BW, Bingman CA, Fox BG, Noguera DR, Donohue TJ.	J Biol Chem	10.1016/j.jbc.2022.102782	2023
	Draft Whole-Genome Sequence of the Purple Nonsulfur Photosynthetic Bacterium Rhodopseudomonas rutila R1.	Robertson S, Rayyan A, Meyer T, Kyndt J.	Microbiol Resour Announc	10.1128/mra.01267-18	2018
	Optimization of the yield of dark microaerobic production of hydrogen from lactate by Rhodopseudomonas palustris.	Lazaro CZ, Hitit ZY, Hallenbeck PC.	Bioresour Technol	10.1016/j.biortech.2017.08.207	2017
Enzymology	Enhancing the Substrate Specificity of Clostridium Succinyl-CoA Reductase for Synthetic Biology and Biocatalysis.	Pfister P, Diehl C, Hammarlund E, Carrillo M, Erb TJ.	Biochemistry	10.1021/acs.biochem.3c00102	2023
	Life in biophotovoltaics systems.	Ge-Zhang S, Cai T, Song M.	Front Plant Sci	10.3389/fpls.2023.1151131	2023
	Autoinducer-2-mediated communication network within human gut microbiota.	Fan Q, Sun H, Lin X, Yang W, Shen X, Zhang L.	ISME J	10.1093/ismejo/wraf204	2025
	Light-independent anaerobic microbial oxidation of manganese driven by an electrosyntrophic coculture.	Huang L, Liu X, Rensing C, Yuan Y, Zhou S, Nealson KH.	ISME J	10.1038/s41396-022-01335-3	2023
	Analysis of the Setomimycin Biosynthetic Gene Cluster from Streptomyces nojiriensis JCM3382 and Evaluation of Its alpha-Glucosidase Inhibitory Activity Using Molecular Docking and Molecular Dynamics Simulations.	Hyun KA, Liang X, Xu Y, Kim SY, Boo KH, Park JS, Chi WJ, Hyun CG.	Int J Mol Sci	10.3390/ijms251910758	2024
	Rational Design of Key Enzymes to Efficiently Synthesize Phycocyanobilin in Escherichia coli.	Wang Z, Zhou J, Li J, Du G, Chen J, Zhao X.	Biomolecules	10.3390/biom14030301	2024
	Preparation, characteristics and cytotoxicity of green synthesized selenium nanoparticles using Paenibacillus motobuensis LY5201 isolated from the local specialty food of longevity area.	Long Q, Cui LK, He SB, Sun J, Chen QZ, Bao HD, Liang TY, Liang BY, Cui LY.	Sci Rep	10.1038/s41598-022-26396-4	2023
Metabolism	Biotransformation of Rutin Using Crude Enzyme from Rhodopseudomonas palustris.	Guan CJ, Ji YJ, Hu JL, Hu CN, Yang F, Yang GE.	Curr Microbiol	10.1007/s00284-017-1204-3	2017
	[Effects of Rhodopseudomonas palustris PSB06 on Pepper Rhizosphere Microbial Community Structure].	Luo LY, Jin DC, Zuo H, Zhang Z, Tan XQ, Zhang DY, Lu XY, Liu Y.	Huan Jing Ke Xue	10.13227/j.hjkx.201606059	2017
	Fluorescence Microscopy Study of the Intracellular Sulfur Globule Protein SgpD in the Purple Sulfur Bacterium Allochromatium vinosum.	Kumpel C, Grein F, Dahl C.	Microorganisms	10.3390/microorganisms11071792	2023
	Exploring the influence of atmospheric CO₂ and O₂ levels on the utility of nitrogen isotopes as proxy for biological N₂ fixation.	Wannicke N, Stueken EE, Bauersachs T, Gehringer MM.	Appl Environ Microbiol	10.1128/aem.00574-24	2024
Metabolism	Engineering an E. coli Near-Infrared Light Sensor.	Ong NT, Olson EJ, Tabor JJ.	ACS Synth Biol	10.1021/acssynbio.7b00289	2018
	Perspectives on Microbial Electron Transfer Networks for Environmental Biotechnology.	Zhou S, Song D, Gu JD, Yang Y, Xu M.	Front Microbiol	10.3389/fmicb.2022.845796	2022
Metabolism	Evaluation of Lighting Systems, Carbon Sources, and Bacteria Cultures on Photofermentative Hydrogen Production.	Hu C, Choy SY, Giannis A.	Appl Biochem Biotechnol	10.1007/s12010-017-2655-5	2018
	Cyanobacterial redox carriers support photosynthesis in a purple phototrophic bacterium.	Bowie AGM, Hitchcock A, Proctor MS, Martin EC, Swainsbury DJK, Hunter CN.	Biochem J	10.1042/bcj20253114	2025
	Tuning by Hydrogen Bonding in Photosynthesis.	Timpmann K, Ratsep M, Jalviste E, Freiberg A.	J Phys Chem B	10.1021/acs.jpcb.4c04405	2024
	Enzymatic degradation of polylactic acid (PLA).	Shalem A, Yehezkeli O, Fishman A.	Appl Microbiol Biotechnol	10.1007/s00253-024-13212-4	2024
	Biocatalytic synthesis of 2-fluoro-3-hydroxypropionic acid.	Liu W, Yuan S, Jin M, Xian M.	Front Bioeng Biotechnol	10.3389/fbioe.2022.969012	2022
Genetics	RB-TnSeq elucidates dicarboxylic-acid-specific catabolism in beta-proteobacteria for improved plastic monomer upcycling.	Pearson AN, Lynch JM, Ho CN, Hudson GA, Roberts JB, Menasalvas J, Vilchez AA, Incha MR, Schmidt M, Mukhopadhyay A, Deutschbauer AM, Thompson MG, Shih PM, Keasling JD.	Appl Environ Microbiol	10.1128/aem.00924-25	2025
	Solar-powered multi-organism symbiont mimic system for beyond natural synthesis of polypeptides from CO₂ and N₂.	Yu W, Zeng Y, Wang Z, Xia S, Yang Z, Chen W, Huang Y, Lv F, Bai H, Wang S.	Sci Adv	10.1126/sciadv.adf6772	2023
	Acclimation strategy of Rhodopseudomonas palustris to high light irradiance.	Muzziotti D, Adessi A, Faraloni C, Torzillo G, De Philippis R.	Microbiol Res	10.1016/j.micres.2017.01.007	2017
	Bio-hydrovoltaic technology: advancing from non-living to living hydrovoltaic systems.	Hu Q, Lin X, Ren G, Zhou S.	Natl Sci Rev	10.1093/nsr/nwaf313	2025
Metabolism	Probing Denatured State Conformational Bias in a Three-Helix Bundle, UBA(2), Using a Cytochrome c Fusion Protein.	Leavens MJ, Cherney MM, Finnegan ML, Bowler BE.	Biochemistry	10.1021/acs.biochem.8b00015	2018
Enzymology	Airlift bioreactor system for simultaneous removal of hydrogen sulfide and ammonia from synthetic and actual waste gases.	Chen CY, Tsai TH, Chang CH, Tseng CF, Lin SY, Chung YC.	J Environ Sci Health A Tox Hazard Subst Environ Eng	10.1080/10934529.2018.1439855	2018
Metabolism	Kinetic modeling of anaerobic degradation of plant-derived aromatic mixtures by Rhodopseudomonas palustris.	Ma Y, Donohue TJ, Noguera DR.	Biodegradation	10.1007/s10532-021-09932-3	2021
Metabolism	Growth-independent cross-feeding modifies boundaries for coexistence in a bacterial mutualism.	McCully AL, LaSarre B, McKinlay JB.	Environ Microbiol	10.1111/1462-2920.13847	2017
	An Experimentally Evaluated Thermodynamic Approach to Estimate Growth of Photoheterotrophic Purple Non-sulfur Bacteria.	Doloman A, Seefeldt LC.	Front Microbiol	10.3389/fmicb.2020.540378	2020
Metabolism	A pathway for biological methane production using bacterial iron-only nitrogenase.	Zheng Y, Harris DF, Yu Z, Fu Y, Poudel S, Ledbetter RN, Fixen KR, Yang ZY, Boyd ES, Lidstrom ME, Seefeldt LC, Harwood CS.	Nat Microbiol	10.1038/s41564-017-0091-5	2018
Metabolism	¹H, ¹³C and ¹⁵N assignment of the paramagnetic high potential iron-sulfur protein (HiPIP) PioC from Rhodopseudomonas palustris TIE-1.	Trindade IB, Invernici M, Cantini F, Louro RO, Piccioli M.	Biomol NMR Assign	10.1007/s12104-020-09947-6	2020
	Metabolically-versatile Ca. Thiodiazotropha symbionts of the deep-sea lucinid clam Lucinoma kazani have the genetic potential to fix nitrogen.	Ratinskaia L, Malavin S, Zvi-Kedem T, Vintila S, Kleiner M, Rubin-Blum M.	ISME Commun	10.1093/ismeco/ycae076	2024
	Collagen Hydrolysates from Animal By-Products in Topical Cosmetic Formulations.	Egner P, Pavlackova J, Sedlarikova J, Matoskova L, Mokrejs P, Janalikova M.	Int J Mol Sci	10.3390/ijms26062776	2025
Metabolism	Escherichia coli possessing the dihydroxyacetone phosphate shunt utilize 5'-deoxynucleosides for growth.	Huening KA, Groves JT, Wildenthal JA, Tabita FR, North JA.	Microbiol Spectr	10.1128/spectrum.03086-23	2024
Phylogeny	Effect of electrode potentials on the microbial community of photo bioelectrochemical systems.	Wu Y, Zheng Y, Xiao Y, Wang Z, Zhao F.	World J Microbiol Biotechnol	10.1007/s11274-017-2312-8	2017
	In Situ Vaccines in the Era of Cancer Immunotherapy: Conceptual Innovation and Clinical Translation.	Shi Y, Hou Y, Mabrouk MT, Yu C, Yang Y.	Adv Sci (Weinh)	10.1002/advs.202509836	2025
Metabolism	Protocol to develop a synthetic biology toolkit for the non-model bacterium R. palustris.	Kathol M, Immethun C, Saha R.	STAR Protoc	10.1016/j.xpro.2023.102158	2023
Metabolism	Metabolic engineering of Rhodopseudomonas palustris for squalene production.	Xu W, Chai C, Shao L, Yao J, Wang Y.	J Ind Microbiol Biotechnol	10.1007/s10295-016-1745-7	2016
	Microbial Upcycling of Depolymerized Lignin into Value-Added Chemicals.	Zhang Y, Cheng C, Fu B, Long T, He N, Fan J, Xue Z, Chen A, Yuan J.	Biodes Res	10.34133/bdr.0027	2024
Metabolism	Genes essential for phototrophic growth by a purple alphaproteobacterium.	Yang J, Yin L, Lessner FH, Nakayasu ES, Payne SH, Fixen KR, Gallagher L, Harwood CS.	Environ Microbiol	10.1111/1462-2920.13852	2017
	Syntrophic interspecies electron transfer drives carbon fixation and growth by Rhodopseudomonas palustris under dark, anoxic conditions.	Liu X, Huang L, Rensing C, Ye J, Nealson KH, Zhou S.	Sci Adv	10.1126/sciadv.abh1852	2021
	In Vitro and Ex Vivo Synergistic Effect of Pyrvinium Pamoate Combined with Miltefosine and Paromomycin against Leishmania.	Melcon-Fernandez E, Galli G, Balana-Fouce R, Garcia-Fernandez N, Martinez-Valladares M, Reguera RM, Garcia-Estrada C, Perez-Pertejo Y.	Trop Med Infect Dis	10.3390/tropicalmed9020030	2024
Metabolism	A polymorphism in the oxygen-responsive repressor PpsR2 confers a growth advantage to Rhodopseudomonas palustris under low light.	Fixen KR, Harwood CS.	Photosynth Res	10.1007/s11120-016-0288-0	2016
	Engineering bionanoreactor in bacteria for efficient hydrogen production.	Tu W, Thompson IP, Huang WE.	Proc Natl Acad Sci U S A	10.1073/pnas.2404958121	2024
	Apoprotein heterogeneity increases spectral disorder and a step-wise modification of the B850 fluorescence peak position.	Ilioaia C, Kruger TPJ, Ilioaia O, Robert B, van Grondelle R, Gall A.	Biochim Biophys Acta Bioenerg	10.1016/j.bbabio.2017.11.003	2018
	The Role of the si-Face Tyrosine of a Homodimeric Ferredoxin-NADP⁺ Oxidoreductase from Bacillus subtilis during Complex Formation and Redox Equivalent Transfer with NADP⁺/H and Ferredoxin.	Seo D.	Antioxidants (Basel)	10.3390/antiox12091741	2023
Metabolism	A Disjointed Pathway for Malonate Degradation by Rhodopseudomonas palustris.	Wang Z, Wen Q, Harwood CS, Liang B, Yang J.	Appl Environ Microbiol	10.1128/aem.00631-20	2020
	Sulfoquinovosyl diacylglycerol is required for dimerisation of the Rhodobacter sphaeroides reaction centre-light harvesting 1 core complex.	Martin EC, Bowie AGM, Wellfare Reid T, Neil Hunter C, Hitchcock A, Swainsbury DJK.	Biochem J	10.1042/bcj20240125	2024
	Discovery of Intratumoral Oncolytic Bacteria Toward Targeted Anticancer Theranostics.	Goto Y, Iwata S, Miyahara M, Miyako E.	Adv Sci (Weinh)	10.1002/advs.202301679	2023
	Biofertilizers from Rhodopseudomonas palustris strains to enhance rice yields and reduce methane emissions	Kantachote D, Nunkaew T, Kantha T, Chaiprapat S.	Appl Soil Ecol	10.1016/j.apsoil.2015.12.015	2016
	Detrimental impact of the Geobacter metallireducens type VI secretion system on direct interspecies electron transfer.	Smith JA, Holmes DE, Woodard TL, Li Y, Liu X, Wang LY, Meier D, Schwarz IA, Lovley DR.	Microbiol Spectr	10.1128/spectrum.00941-23	2023
	Low-Toxicity Self-Photosensitized Biohybrid Systems for Enhanced Light-Driven H₂ Production.	Wang Y, Liu Y, Bai L, Wang J, Zhao N, Cui D, Zhao M.	Int J Mol Sci	10.3390/ijms25063085	2024
	A p-Coumaroyl-CoA Biosensor for Dynamic Regulation of Naringenin Biosynthesis in Saccharomyces cerevisiae.	Liu D, Sica MS, Mao J, Chao LF, Siewers V.	ACS Synth Biol	10.1021/acssynbio.2c00111	2022
	Chitin-enriched insect frass fertilizer as a biorational alternative for root-knot nematode (Meloidogyne incognita) management.	Kisaakye J, Beesigamukama D, Haukeland S, Subramanian S, Thiongo PK, Kelemu S, Tanga CM.	Front Plant Sci	10.3389/fpls.2024.1361739	2024
	Characterization of 2-phenanthroate:CoA ligase from the sulfate-reducing, phenanthrene-degrading enrichment culture TRIP.	Kaplieva-Dudek I, Samak NA, Bormann J, Kaschani F, Kaiser M, Meckenstock RU.	Appl Environ Microbiol	10.1128/aem.01296-24	2024
	Optogenetic control of Corynebacterium glutamicum gene expression.	Deng C, Xin R, Li X, Zhang J, Fan L, Qiu Y, Zhao L.	Nucleic Acids Res	10.1093/nar/gkae1149	2024
Transcriptome	Nitrogen fixation and transcriptome of a new diazotrophic Geomonas from paddy soils.	Liu G-H, Yang S, Han S, Xie C-J, Liu X, Rensing C, Zhou S-G.	mBio	10.1128/mbio.02150-23	2023
	Reliable determination of the growth and hydrogen production parameters of the photosynthetic bacterium Rhodobacter capsulatus in fed batch culture using a combination of the Gompertz function and the Luedeking-Piret model.	Deseure J, Obeid J, Willison JC, Magnin JP.	Heliyon	10.1016/j.heliyon.2021.e07394	2021
	Influence of Effective Microorganisms on Some Biological and Biochemical Aspects of Spodoptera littoralis (Boisduval) (Lepidoptera: Noctuidae).	Zayed MS, Taha EA, Hegazy FH, Albogami B, Noureldeen A, Noureldeen A, Elnabawy EM.	Life (Basel)	10.3390/life12111726	2022
Genetics	Taxonomic Re-Evaluation and Genomic Comparison of Novel Extracellular Electron Uptake-Capable Rhodovulum visakhapatnamense and Rhodovulum sulfidophilum Isolates	Davenport EJ, Bose A.	Microorganisms	10.3390/microorganisms10061235	2022
	Two-Photon Excitation Spectra of Various Fluorescent Proteins within a Broad Excitation Range.	Leben R, Lindquist RL, Hauser AE, Niesner R, Rakhymzhan A.	Int J Mol Sci	10.3390/ijms232113407	2022
Metabolism	The catabolism of lignin-derived p-methoxylated aromatic compounds by Rhodococcus jostii RHA1.	Wolf ME, Lalande AT, Newman BL, Bleem AC, Palumbo CT, Beckham GT, Eltis LD.	Appl Environ Microbiol	10.1128/aem.02155-23	2024
	Revealing the role of Plant Growth Promoting Rhizobacteria in suppressive soils against Fusarium oxysporum f.sp. cubense based on metagenomic analysis.	Nisrina L, Effendi Y, Pancoro A.	Heliyon	10.1016/j.heliyon.2021.e07636	2021
	Advancements in biohydrogen production - a comprehensive review of technologies, lifecycle analysis, and future scope.	Sanghvi AH, Manjoo A, Rajput P, Mahajan N, Rajamohan N, Abrar I.	RSC Adv	10.1039/d4ra06214k	2024
	Three-dimensional diffractive acoustic tomography.	Menozzi L, Vu T, Canning AJ, Rawtani H, Taboada C, Abi Antoun ME, Ma C, Delia J, Nguyen VT, Cho SW, Chen J, Charity T, Xu Y, Tran P, Xia J, Palmer GM, Vo-Dinh T, Feng L, Yao J.	Nat Commun	10.1038/s41467-025-56435-3	2025
	Arsenic contamination in areas surrounding mines and selection of potential As-resistant purple nonsulfur bacteria for use in bioremediation based on their detoxification mechanisms	Nookongbut P, Kantachote D, Megharaj M.	Ann Microbiol		2016
	Improved biosynthesis of heme in Bacillus subtilis through metabolic engineering assisted fed-batch fermentation.	Yang S, Wang A, Li J, Shao Y, Sun F, Li S, Cao K, Liu H, Xiong P, Gao Z.	Microb Cell Fact	10.1186/s12934-023-02077-3	2023
Phylogeny	Contrasting the microbiomes from forest rhizosphere and deeper bulk soil from an Amazon rainforest reserve.	Fonseca JP, Hoffmann L, Cabral BCA, Dias VHG, Miranda MR, de Azevedo Martins AC, Boschiero C, Bastos WR, Silva R.	Gene	10.1016/j.gene.2017.11.039	2018
Metabolism	Effects of metal ions on biomass and 5-aminolevulinic acid production in Rhodopseudomonas palustris wastewater treatment.	Liu S, Zhang G, Li J, Li X, Zhang J.	Water Sci Technol	10.2166/wst.2015.479	2016
Enzymology	3,3'-Thiodipropionic acid (TDP), a possible precursor for the synthesis of polythioesters: identification of TDP transport proteins in Variovorax paradoxus TBEA6.	Reddy MV, Steinbuchel A.	Appl Microbiol Biotechnol	10.1007/s00253-021-11294-y	2021
	Leveraging the intratumoral microbiota to treat human cancer: are engineered exosomes an effective strategy?	Qiu J, Jiang Y, Ye N, Jin G, Shi H, Qian D.	J Transl Med	10.1186/s12967-024-05531-x	2024
Metabolism	Effect of light-dark cycles on hydrogen and poly-beta-hydroxybutyrate production by a photoheterotrophic culture and Rhodobacter capsulatus using a dark fermentation effluent as substrate.	Montiel Corona V, Le Borgne S, Revah S, Morales M.	Bioresour Technol	10.1016/j.biortech.2016.12.021	2017
	Enhanced extracellular ammonium release in the plant endophyte Gluconacetobacter diazotrophicus through genome editing.	Dietz BR, Olszewski NE, Barney BM.	Microbiol Spectr	10.1128/spectrum.02478-23	2024
Phylogeny	[Isolation, Identification and Characteristics of a Rhodopseudomonas with High Ammonia-nitrogen Removal Efficiency].	Huang XJ, Yang C, Ni JP, Li ZL.	Huan Jing Ke Xue	10.13227/j.hjkx.2016.06.035	2016
Metabolism	Hydrogen production under salt stress conditions by a freshwater Rhodopseudomonas palustris strain.	Adessi A, Concato M, Sanchini A, Rossi F, De Philippis R.	Appl Microbiol Biotechnol	10.1007/s00253-016-7291-4	2016
	Metagenome-Assembled Genome Sequence of Rhodopseudomonas palustris Strain ELI 1980, Commercialized as a Biostimulant.	Crovadore J, Xu S, Chablais R, Cochard B, Lukito D, Calmin G, Lefort F.	Genome Announc	10.1128/genomea.00221-17	2017
	Impact of Double Covalent Binding of BV in NIR FPs on Their Spectral and Physicochemical Properties.	Stepanenko OV, Kuznetsova IM, Turoverov KK, Stepanenko OV.	Int J Mol Sci	10.3390/ijms23137347	2022
	Catalytic carbon-carbon bond cleavage in lignin via manganese-zirconium-mediated autoxidation.	Palumbo CT, Gu NX, Bleem AC, Sullivan KP, Katahira R, Stanley LM, Kenny JK, Ingraham MA, Ramirez KJ, Haugen SJ, Amendola CR, Stahl SS, Beckham GT.	Nat Commun	10.1038/s41467-024-45038-z	2024
	Combinatorial Approaches for Efficient Design of Photoswitchable Protein-Protein Interactions as In Vivo Actuators.	Zhang X, Pan Y, Kang S, Gu L.	Front Bioeng Biotechnol	10.3389/fbioe.2022.844405	2022
Metabolism	H2 production in Rhodopseudomonas palustris as a way to cope with high light intensities.	Muzziotti D, Adessi A, Faraloni C, Torzillo G, De Philippis R.	Res Microbiol	10.1016/j.resmic.2016.02.003	2016
Metabolism	Effect of volatile fatty acids mixtures on the simultaneous photofermentative production of hydrogen and polyhydroxybutyrate.	Cardena R, Valdez-Vazquez I, Buitron G.	Bioprocess Biosyst Eng	10.1007/s00449-016-1691-9	2017
	Potential of biofertilizers from selected Rhodopseudomonas palustris strains to assist rice (Oryza sativa L. subsp. indica) growth under salt stress and to reduce greenhouse gas emissions	Kantha T, Kantachote D, Klongdee N.	Ann Microbiol	10.1007/s13213-015-1049-6	2015
	Photoreception and signaling in bacterial phytochrome revealed by single-particle cryo-EM.	Malla TN, Hernandez C, Muniyappan S, Menendez D, Bizhga D, Mendez JH, Schwander P, Stojkovic EA, Schmidt M.	Sci Adv	10.1126/sciadv.adq0653	2024
Enzymology	Characterizations of purple non-sulfur bacteria isolated from paddy fields, and identification of strains with potential for plant growth-promotion, greenhouse gas mitigation and heavy metal bioremediation.	Sakpirom J, Kantachote D, Nunkaew T, Khan E.	Res Microbiol	10.1016/j.resmic.2016.12.001	2017
Metabolism	The importance of the benzoic acid carboxylate moiety for substrate recognition by CYP199A4 from Rhodopseudomonas palustris HaA2.	Coleman T, Chao RR, De Voss JJ, Bell SG.	Biochim Biophys Acta	10.1016/j.bbapap.2016.03.006	2016
	A genome-scale metabolic model for the denitrifying bacterium Thauera sp. MZ1T accurately predicts degradation of pollutants and production of polymers.	Tec-Campos D, Tibocha-Bonilla JD, Jiang C, Passi A, Thiruppathy D, Zuniga C, Posadas C, Zepeda A, Zengler K.	PLoS Comput Biol	10.1371/journal.pcbi.1012736	2025
Metabolism	Predicted AS3MT Proteins Methylate Arsenic and Support Two Major Phylogenetic AS3MT Groups.	Torbol Pedersen J, De Loma J, Levi M, Palmgren M, Broberg K.	Chem Res Toxicol	10.1021/acs.chemrestox.0c00375	2020
Metabolism	Binding asymmetry and conformational studies of the AtGSDA dimer.	Jia Q, Zeng H, Li M, Tang J, Xiao N, Gao S, Li H, Zhang J, Zhang Z, Xie W.	Comput Struct Biotechnol J	10.1016/j.csbj.2023.11.004	2023
Genetics	Comprehensive whole metagenomics analysis uncovers microbial community and resistome variability across anthropogenically contaminated soils in urban and suburban areas of Tamil Nadu, India.	Vasanthrao R, Nidhin IK, Taj Z, Chattopadhyay I.	Front Microbiol	10.3389/fmicb.2025.1649872	2025
Metabolism	Light-enhanced bioaccumulation of molybdenum by nitrogen-deprived recombinant anoxygenic photosynthetic bacterium Rhodopseudomonas palustris.	Naito T, Sachuronggui, Ueki M, Maeda I.	Biosci Biotechnol Biochem	10.1080/09168451.2015.1086260	2016
	Ribosome Purification from an alpha-proteobacterium and rRNA Analysis by Northern Blot.	Yin L, Harwood CS.	Bio Protoc	10.21769/bioprotoc.3835	2020
Transcriptome	High-throughput transcriptome sequencing analysis provides preliminary insights into the biotransformation mechanism of Rhodopseudomonas palustris treated with alpha-rhamnetin-3-rhamnoside.	Bi L, Guan CJ, Yang GE, Yang F, Yan HY, Li QS.	Microbiol Res	10.1016/j.micres.2016.01.002	2016
Genetics	Microbiome properties in the root nodules of Prosopis cineraria, a leguminous desert tree.	Ali R, Chaluvadi SR, Wang X, Hazzouri KM, Sudalaimuthuasari N, Rafi M, Al-Nuaimi M, Sasi S, Antepenko E, Bennetzen JL, Amiri KMA.	Microbiol Spectr	10.1128/spectrum.03617-23	2024
	Uncovering the hidden bacterial ghost communities of yeast and experimental evidences demonstrates yeast as thriving hub for bacteria.	Indu B, Keertana T, Ipsita S, Jagadeeshwari U, Sasikala C, Ramana CV.	Sci Rep	10.1038/s41598-021-88658-x	2021
Enzymology	Insights into the Structure of Rubisco from Dinoflagellates-In Silico Studies.	Rydzy M, Tracz M, Szczepaniak A, Grzyb J.	Int J Mol Sci	10.3390/ijms22168524	2021
	Glutamate production from aerial nitrogen using the nitrogen-fixing bacterium Klebsiella oxytoca.	Yoshidome D, Hidaka M, Miyanaga T, Ito Y, Kosono S, Nishiyama M.	Commun Biol	10.1038/s42003-024-06147-z	2024
	Insertion Specificity of the hATx-6 Transposase of Hydra magnipapillata.	Riggs P, Blundell-Hunter G, Hagelberger J, Ren G, Ettwiller L, Berkmen M.	Front Mol Biosci	10.3389/fmolb.2021.734154	2021
Metabolism	Agroindustrial residues and energy crops for the production of hydrogen and poly-beta-hydroxybutyrate via photofermentation.	Corneli E, Adessi A, Dragoni F, Ragaglini G, Bonari E, De Philippis R.	Bioresour Technol	10.1016/j.biortech.2016.06.046	2016
Metabolism	Dynamic comparison on the usage of probiotics in organic wastewater treatment under aerobic conditions in a diurnal environment.	Liu J, Liu Y, Li G, Shen J, Tao Z, Tian Y, Chen L, Li C, Lu L.	J Air Waste Manag Assoc	10.1080/10962247.2016.1158131	2016
	Exploiting fourth-generation synchrotron radiation for enzyme and photoreceptor characterization.	Malla TN, Muniyappan S, Menendez D, Ogukwe F, Dale AN, Clayton JD, Weatherall DD, Karki P, Dangi S, Mandella V, Pacheco AA, Stojkovic EA, Rose SL, Orlans J, Basu S, de Sanctis D, Schmidt M.	IUCrJ	10.1107/s2052252524010868	2025
	Synthetic Biology Tool Development Advances Predictable Gene Expression in the Metabolically Versatile Soil Bacterium Rhodopseudomonas palustris.	Immethun CM, Kathol M, Changa T, Saha R.	Front Bioeng Biotechnol	10.3389/fbioe.2022.800734	2022
	Opticool: Cutting-edge transgenic optical tools.	Fenelon KD, Krause J, Koromila T.	PLoS Genet	10.1371/journal.pgen.1011208	2024
	Intrinsic Ability of the beta-Oxidation Pathway To Produce Bioactive Styrylpyrones.	Huang Y, Hoefgen S, Gherlone F, Valiante V.	Angew Chem Int Ed Engl	10.1002/anie.202206851	2022
	Light-driven ammonium oxidation to dinitrogen gas by self-photosensitized biohybrid anammox systems.	Guo M, Wang C, Qiao S.	iScience	10.1016/j.isci.2023.106725	2023
	Transparent polyvinyl-alcohol cryogel as immobilisation matrix for continuous biohydrogen production by phototrophic bacteria.	du Toit JP, Pott RWM, Pott RWM.	Biotechnol Biofuels	10.1186/s13068-020-01743-7	2020
	Purification and functional characterization of thermostable 5-aminolevulinic acid synthases	Meng Q, Zhang Y, Ma C, Ma H, Zhao X, Chen T.	Biotechnol Lett		2015
Enzymology	The Pseudomonas aeruginosa PAO1 metallo flavoprotein d-2-hydroxyglutarate dehydrogenase requires Zn²⁺ for substrate orientation and activation.	Quaye JA, Gadda G.	J Biol Chem	10.1016/j.jbc.2023.103008	2023
Genetics	Metagenome analyses of microbial population in geotextile fabrics used in permeable reactor barriers for toluene biodegradation.	Tombuloglu H, Yaman C, Boudellioua I, Cevik E, Anil I, Aga O, Yaman AB, Qureshi A, Gunday ST.	3 Biotech	10.1007/s13205-023-03460-y	2023
Metabolism	Biological reformation of ethanol to hydrogen by Rhodopseudomonas palustris CGA009.	Liu Y, Ghosh D, Hallenbeck PC.	Bioresour Technol	10.1016/j.biortech.2014.11.047	2015
Enzymology	The copper-responsive regulator CsoR is indirectly involved in Bradyrhizobium diazoefficiens denitrification.	Pacheco PJ, Cabrera JJ, Jimenez-Leiva A, Torres MJ, Gates AJ, Bedmar EJ, Richardson DJ, Mesa S, Tortosa G, Delgado MJ.	FEMS Microbiol Lett	10.1093/femsle/fnad084	2023
	Synthetic-biology approach for plant lignocellulose engineering.	Yoshida K, Sakamoto S, Mitsuda N.	Plant Biotechnol (Tokyo)	10.5511/plantbiotechnology.24.0630a	2024
Genetics	TransAAP: an automated annotation pipeline for membrane transporter prediction in bacterial genomes.	Elbourne LDH, Wilson-Mortier B, Ren Q, Hassan KA, Tetu SG, Paulsen IT.	Microb Genom	10.1099/mgen.0.000927	2023
	The structural effect between the output module and chromophore-binding domain is a two-way street via the hairpin extension.	Kurttila M, Etzl S, Rumfeldt J, Takala H, Galler N, Winkler A, Ihalainen JA.	Photochem Photobiol Sci	10.1007/s43630-022-00265-5	2022
	Exploring AI-2-mediated interspecies communications within rumen microbial communities.	Liu X, Liu Q, Sun S, Sun H, Wang Y, Shen X, Zhang L.	Microbiome	10.1186/s40168-022-01367-z	2022
Enzymology	Aryl Coenzyme A Ligases, a Subfamily of the Adenylate-Forming Enzyme Superfamily.	Arnold ME, Kaplieva-Dudek I, Heker I, Meckenstock RU.	Appl Environ Microbiol	10.1128/aem.00690-21	2021
	A photoheterotrophic bacterium from Iceland has adapted its photosynthetic machinery to the long days of polar summer.	Tomasch J, Kopejtka K, Bily T, Gardiner AT, Gardian Z, Shivaramu S, Koblizek M, Kaftan D.	mSystems	10.1128/msystems.01311-23	2024
Metabolism	Large Hydrogen Isotope Fractionation Distinguishes Nitrogenase-Derived Methane from Other Methane Sources.	Luxem KE, Leavitt WD, Zhang X.	Appl Environ Microbiol	10.1128/aem.00849-20	2020
	Simple neutralization test report: Do probiotics contribute to COVID-19 therapy?	Veterini AS, Prakoeswa CRS, Tinduh D, Satuman S.	Biochem Biophys Rep	10.1016/j.bbrep.2022.101348	2022
	Biological fermentation pilot-scale systems and evaluation for commercial viability towards sustainable biohydrogen production.	Zhang Q, Jiao Y, He C, Ruan R, Hu J, Ren J, Toniolo S, Jiang D, Lu C, Li Y, Man Y, Zhang H, Zhang Z, Xia C, Wang Y, Jing Y, Zhang X, Lin R, Li G, Yue J, Tahir N.	Nat Commun	10.1038/s41467-024-48790-4	2024
Metabolism	Lipid remodeling in Rhodopseudomonas palustris TIE-1 upon loss of hopanoids and hopanoid methylation.	Neubauer C, Dalleska NF, Cowley ES, Shikuma NJ, Wu CH, Sessions AL, Newman DK.	Geobiology	10.1111/gbi.12143	2015
	Mutation design of a thermophilic Rubisco based on three-dimensional structure enhances its activity at ambient temperature.	Fujihashi M, Nishitani Y, Kiriyama T, Aono R, Sato T, Takai T, Tagashira K, Fukuda W, Atomi H, Imanaka T, Miki K.	Proteins	10.1002/prot.25080	2016
	Global niche partitioning of purine and pyrimidine cross-feeding among ocean microbes.	Braakman R, Satinsky B, O'Keefe TJ, Longnecker K, Hogle SL, Becker JW, Li RC, Dooley K, Arellano A, Kido Soule MC, Kujawinski EB, Chisholm SW.	Sci Adv	10.1126/sciadv.adp1949	2025
	Structure of the turnover-ready state of an ancestral respiratory complex I.	Ivanov BS, Bridges HR, Jarman OD, Hirst J.	Nat Commun	10.1038/s41467-024-53679-3	2024
	Effect of Feed Additives Supplementation on the Growth Performance, Gastrointestinal Tract Characteristics, and Carcass Composition in Turkey Hens.	Janocha A, Milczarek A, Kosmalski M, Gajownik-Mucka P, Radzikowski D.	Animals (Basel)	10.3390/ani12243464	2022
Enzymology	Rhodopseudomonas palustris CGA010 Proteome Implicates Extracytoplasmic Function Sigma Factor in Stress Response.	Allen MS, Hurst GB, Lu TY, Perry LM, Pan C, Lankford PK, Pelletier DA.	J Proteome Res	10.1021/pr5012558	2015
	The open, the closed, and the empty: time-resolved fluorescence spectroscopy and computational analysis of RC-LH1 complexes from Rhodopseudomonas palustris.	Beyer SR, Muller L, Southall J, Cogdell RJ, Ullmann GM, Kohler J.	J Phys Chem B	10.1021/jp510822k	2015
	Excitation energy transfer in proteoliposomes reconstituted with LH2 and RC-LH1 complexes from Rhodobacter sphaeroides.	Huang X, Vasilev C, Swainsbury DJK, Hunter CN.	Biosci Rep	10.1042/bsr20231302	2024
Metabolism	Performance, carotenoids yield and microbial population dynamics in a photobioreactor system treating acidic wastewater: Effect of hydraulic retention time (HRT) and organic loading rate (OLR).	Liu S, Zhang G, Zhang J, Li X, Li J.	Bioresour Technol	10.1016/j.biortech.2015.10.044	2016
Enzymology	Evolving a New Electron Transfer Pathway for Nitrogen Fixation Uncovers an Electron Bifurcating-Like Enzyme Involved in Anaerobic Aromatic Compound Degradation.	Lewis NM, Sarne A, Fixen KR.	mBio	10.1128/mbio.02881-22	2023
	Sustainable production of bacterioruberin carotenoid and its derivatives from Arthrobacter agilis NP20 on whey-based medium: optimization and product characterization.	Noby N, Khattab SN, Soliman NA.	Bioresour Bioprocess	10.1186/s40643-023-00662-3	2023
	Development and application of a new biological nano-selenium fermentation broth based on Bacillus subtilis SE201412.	Huang S, Yu K, Wen L, Long X, Sun J, Liu Q, Zheng Z, Zheng W, Luo H, Liu J.	Sci Rep	10.1038/s41598-023-29737-z	2023
Enzymology	Enabling Aromatic Hydroxylation in a Cytochrome P450 Monooxygenase Enzyme through Protein Engineering.	Coleman T, Lee JZH, Kirk AM, Doherty DZ, Podgorski MN, Pinidiya DK, Bruning JB, De Voss JJ, Krenske EH, Bell SG.	Chemistry	10.1002/chem.202201895	2022
	Distinct gene clusters drive formation of ferrosome organelles in bacteria.	Grant CR, Amor M, Trujillo HA, Krishnapura S, Iavarone AT, Komeili A.	Nature	10.1038/s41586-022-04741-x	2022
	Photosynthetic biohybrid coculture for tandem and tunable CO₂ and N₂ fixation.	Cestellos-Blanco S, Chan RR, Shen YX, Kim JM, Tacken TA, Ledbetter R, Yu S, Seefeldt LC, Yang P.	Proc Natl Acad Sci U S A	10.1073/pnas.2122364119	2022
	Phototrophic N₂ and CO₂ Fixation Using a Rhodopseudomonas palustris-H₂ Mediated Electrochemical System With Infrared Photons.	Soundararajan M, Ledbetter R, Kusuma P, Zhen S, Ludden P, Bugbee B, Ensign SA, Seefeldt LC.	Front Microbiol	10.3389/fmicb.2019.01817	2019
	Comparative analysis of microbial community between different cathode systems of microbial fuel cells for denitrification.	Li C, Xu M, Lu Y, Fang F, Cao J.	Environ Technol	10.1080/09593330.2015.1080764	2016
	Reconstruction of the ancient cyanobacterial proto-circadian clock system KaiABC.	Li S, Zhou Z, Wan Y, Jia X, Wang P, Wang Y, Zuo T, Cheng H, Fang X, Dong S, He J, Yang Y, Xu Y, Fu S, Wang X, Qin X, Xie Q, Xu X, Zhao Y, Liang D, Zhang P, Zhang Q, Guo J.	EMBO J	10.1038/s44318-025-00425-0	2025
	Enigmatic Evolutionary History of Porphobilinogen Deaminase in Eukaryotic Phototrophs.	Obornik M.	Biology (Basel)	10.3390/biology10050386	2021
Metabolism	Phototrophic Lactate Utilization by Rhodopseudomonas palustris Is Stimulated by Coutilization with Additional Substrates.	Govindaraju A, McKinlay JB, LaSarre B.	Appl Environ Microbiol	10.1128/aem.00048-19	2019
Metabolism	Breakdown of food waste by anaerobic fermentation and non-oxygen producing photosynthesis using a photosynthetic bacterium.	Mekjinda N, Ritchie RJ.	Waste Manag	10.1016/j.wasman.2014.10.018	2015
	Studies Using Mutant Strains of Azospirillum brasilense Reveal That Atmospheric Nitrogen Fixation and Auxin Production Are Light Dependent Processes.	Housh AB, Noel R, Powell A, Waller S, Wilder SL, Sopko S, Benoit M, Powell G, Schueller MJ, Ferrieri RA.	Microorganisms	10.3390/microorganisms11071727	2023
	Structural and conformational study of the O-polysaccharide produced by the metabolically versatile photosynthetic bacterium Rhodopseudomonas palustris strain BisA53.	Silipo A, Di Lorenzo F, De Felice A, Vanacore A, De Castro C, Gully D, Lanzetta R, Parrilli M, Giraud E, Molinaro A.	Carbohydr Polym	10.1016/j.carbpol.2014.08.037	2014
Metabolism	Signaling-State Formation Mechanism of a BLUF Protein PapB from the Purple Bacterium Rhodopseudomonas palustris Studied by Femtosecond Time-Resolved Absorption Spectroscopy.	Fujisawa T, Takeuchi S, Masuda S, Tahara T.	J Phys Chem B	10.1021/jp5076252	2014
	Chemotaxis may assist marine heterotrophic bacterial diazotrophs to find microzones suitable for N₂ fixation in the pelagic ocean.	Hallstrom S, Raina JB, Ostrowski M, Parks DH, Tyson GW, Hugenholtz P, Stocker R, Seymour JR, Riemann L.	ISME J	10.1038/s41396-022-01299-4	2022
	Characterization of exopolymeric substances from selected Rhodopseudomonas palustris strains and their ability to adsorb sodium ions.	Nunkaew T, Kantachote D, Nitoda T, Kanzaki H, Ritchie RJ.	Carbohydr Polym	10.1016/j.carbpol.2014.08.099	2015
	Replication-associated inversions are the dominant form of bacterial chromosome structural variation.	D'Iorio M, Dewar K.	Life Sci Alliance	10.26508/lsa.202201434	2023
	DEVELOPMENT OF SINGLE-DOMAIN NEAR-INFRARED FLUORESCENT PROTEIN GAF-FP BASED ON BACTERIAL PHYTOCHROME.	Rumyantsev KA, Shcherbakova DM, Zaharova NI, Verhusha VV, Turoverov KK.	Tsitologiia		2016
Enzymology	Expression, purification and crystal structure determination of a ferredoxin reductase from the actinobacterium Thermobifida fusca.	Rodriguez Buitrago JA, Klunemann T, Blankenfeldt W, Schallmey A.	Acta Crystallogr F Struct Biol Commun	10.1107/s2053230x2000922x	2020
	The effects of Rhodopseudomonas palustris PSB06 and CGA009 with different agricultural applications on rice growth and rhizosphere bacterial communities.	Luo L, Wang P, Zhai Z, Su P, Tan X, Zhang D, Zhang Z, Liu Y.	AMB Express	10.1186/s13568-019-0897-z	2019
	[Construction and Characterization of B850-Only LH2 Energy Transfer System in Purple Bacteria].	Li K, Zhao CG, Yue HY, Yang SP, Qu YB, Jiao NZ.	Guang Pu Xue Yu Guang Pu Fen Xi		2015
	Near-infrared PAINT localization microscopy via chromophore replenishment of phytochrome-derived fluorescent tag.	Lu K, Wazawa T, Matsuda T, Shcherbakova DM, Verkhusha VV, Nagai T.	Commun Biol	10.1038/s42003-024-06169-7	2024
	Distinct oral-associated gastric microbiota and Helicobacter pylori communities for spatial microbial heterogeneity in gastric cancer.	Lei L, Zhao L-Y, Cheng R, Zhang H, Xia M, Chen X-L, Kudriashov V, Liu K, Zhang W-H, Jiang H, Chen Y, Zhu L, Zhou H, Yang K, Hu T, Hu J-K.	mSystems	10.1128/msystems.00089-24	2024
	Increase of Salt Tolerance in Carbon-Starved Cells of Rhodopseudomonas palustris Depending on Photosynthesis or Respiration.	Wasai S, Kanno N, Matsuura K, Haruta S.	Microorganisms	10.3390/microorganisms6010004	2018
	What caused the formation of the absorption maximum at 421 nm in vivo spectra of Rhodopseudomonas palustris.	Zhao C, Yue H, Cheng Q, Chen S, Yang S.	Photochem Photobiol	10.1111/php.12334	2014
	Comparative computational study to augment UbiA prenyltransferases inherent in purple photosynthetic bacteria cultured from mangrove microbial mats in Qatar for coenzyme Q₁₀ biosynthesis.	George DM, Ramadoss R, Mackey HR, Vincent AS.	Biotechnol Rep (Amst)	10.1016/j.btre.2022.e00775	2022
	Plug-and-Display Photo-Switchable Systems on Plant Virus Nanoparticles.	Kauth L, Buhl EM, Luka J, Richter K, Commandeur U, Dickmeis C.	BioTech (Basel)	10.3390/biotech11040049	2022
	Antileishmanial Effect of 1,5- and 1,8-Substituted Fused Naphthyridines.	Melcon-Fernandez E, Martin-Encinas E, Palacios F, Galli G, Reguera RM, Martinez-Valladares M, Balana-Fouce R, Alonso C, Perez-Pertejo Y.	Molecules	10.3390/molecules29010074	2023
Enzymology	Characterisation of four hotdog-fold thioesterases for their implementation in a novel organic acid production system.	Hickman TWP, Baud D, Benhamou L, Hailes HC, Ward JM.	Appl Microbiol Biotechnol	10.1007/s00253-020-10519-w	2020
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Genetics	Effect of endophytic diazotroph Enterobacter roggenkampii ED5 on nitrogen-metabolism-related microecology in the sugarcane rhizosphere at different nitrogen levels.	Guo DJ, Li DP, Yang B, Verma KK, Singh RK, Singh P, Khan Q, Sharma A, Qin Y, Zhang BQ, Song XP, Li YR.	Front Microbiol	10.3389/fmicb.2023.1132016	2023
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Enzymology	Functional Diversity of Homologous Oxidoreductases-Tuning of Substrate Specificity by a FAD-Stacking Residue for Iron Acquisition and Flavodoxin Reduction.	Hammerstad M, Rugtveit AK, Dahlen S, Andersen HK, Hersleth HP.	Antioxidants (Basel)	10.3390/antiox12061224	2023
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Metabolism	Purification and functional characterization of thermostable 5-aminolevulinic acid synthases.	Meng Q, Zhang Y, Ma C, Ma H, Zhao X, Chen T.	Biotechnol Lett	10.1007/s10529-015-1903-4	2015
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Genetics	aMeta: an accurate and memory-efficient ancient metagenomic profiling workflow.	Pochon Z, Bergfeldt N, Kirdok E, Vicente M, Naidoo T, van der Valk T, Altinisik NE, Krzewinska M, Dalen L, Gotherstrom A, Mirabello C, Unneberg P, Oskolkov N.	Genome Biol	10.1186/s13059-023-03083-9	2023
Metabolism	Biohydrogen production from CO-rich syngas via a locally isolated Rhodopseudomonas palustris PT.	Pakpour F, Najafpour G, Tabatabaei M, Tohidfar M, Younesi H.	Bioprocess Biosyst Eng	10.1007/s00449-013-1064-6	2014
Metabolism	The structure of a novel electron-transfer ferredoxin from Rhodopseudomonas palustris HaA2 which contains a histidine residue in its iron-sulfur cluster-binding motif.	Zhang T, Zhang A, Bell SG, Wong LL, Zhou W.	Acta Crystallogr D Biol Crystallogr	10.1107/s139900471400474x	2014
	Proterozoic Acquisition of Archaeal Genes for Extracellular Electron Transfer: A Metabolic Adaptation of Aerobic Ammonia-Oxidizing Bacteria to Oxygen Limitation.	Gulay A, Fournier G, Smets BF, Girguis PR.	Mol Biol Evol	10.1093/molbev/msad161	2023
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	Light-driven carbon dioxide reduction to methane by Methanosarcina barkeri in an electric syntrophic coculture.	Huang L, Liu X, Zhang Z, Ye J, Rensing C, Zhou S, Nealson KH.	ISME J	10.1038/s41396-021-01078-7	2022
	Extraction, characterization, and biological activities of exopolysaccharides from plant root soil fungus Fusarium merismoides A6.	Chen G, Xu Z, Wang F, Liu L, Wei Y, Li J, Zhang L, Zheng K, Wu L, Men X, Zhang H.	Braz J Microbiol	10.1007/s42770-022-00842-x	2023
Enzymology	Kinetically and Crystallographically Guided Mutations of a Benzoate CoA Ligase (BadA) Elucidate Mechanism and Expand Substrate Permissivity.	Thornburg CK, Wortas-Strom S, Nosrati M, Geiger JH, Walker KD.	Biochemistry	10.1021/acs.biochem.5b00899	2015
Genetics	Development of a CRISPR-Cas12a system for efficient genome engineering in clostridia.	Zhang Y, Kubiak AM, Bailey TS, Claessen L, Hittmeyer P, Dubois L, Theys J, Lambin P.	Microbiol Spectr	10.1128/spectrum.02459-23	2023
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Metabolism	Introducing capnophilic lactic fermentation in a combined dark-photo fermentation process: a route to unparalleled H2 yields.	Dipasquale L, Adessi A, d'Ippolito G, Rossi F, Fontana A, De Philippis R.	Appl Microbiol Biotechnol	10.1007/s00253-014-6231-4	2015
Metabolism	Structure-Guided Biochemical Analysis of Quorum Signal Synthase Specificities.	Dong SH, Nhu-Lam M, Nagarajan R, Nair SK.	ACS Chem Biol	10.1021/acschembio.0c00142	2020
	Study of PLA pre-treatment, enzymatic and model-compost degradation, and valorization of degradation products to bacterial nanocellulose.	Sourkouni G, Jeremic S, Kalogirou C, Hofft O, Nenadovic M, Jankovic V, Rajasekaran D, Pandis P, Padamati R, Nikodinovic-Runic J, Argirusis C.	World J Microbiol Biotechnol	10.1007/s11274-023-03605-4	2023
	Electrochemical Observation and pH Dependence of All Three Expected Redox Couples in an Extremophilic Bifurcating Electron Transfer Flavoprotein with Fused Subunits.	Das D, El Housseini W, Brachi M, Minteer SD, Miller AF.	JACS Au	10.1021/jacsau.4c01219	2025
	Sustainable Polyhydroxyalkanoate Production from Food Waste via Bacillus mycoides ICRI89: Enhanced 3D Printing with Poly (Methyl Methacrylate) Blend.	Rofeal M, Abdelmalek F, Pietrasik J.	Polymers (Basel)	10.3390/polym15204173	2023
	Biomass production from fermented starch wastewater in photo-bioreactor with internal overflow recirculation.	Prachanurak P, Chiemchaisri C, Chiemchaisri W, Yamamotob K.	Bioresour Technol	10.1016/j.biortech.2014.03.119	2014
Enzymology	Enzymes of the benzoyl-coenzyme A degradation pathway in the hyperthermophilic archaeon Ferroglobus placidus.	Schmid G, Rene SB, Boll M.	Environ Microbiol	10.1111/1462-2920.12785	2015
	Mutualism reduces the severity of gene disruptions in predictable ways across microbial communities.	Martinson JNV, Chacon JM, Smith BA, Villarreal AR, Hunter RC, Harcombe WR.	ISME J	10.1038/s41396-023-01534-6	2023
	Design and implementation of aerobic and ambient CO₂-reduction as an entry-point for enhanced carbon fixation.	Satanowski A, Marchal DG, Perret A, Petit JL, Bouzon M, Doring V, Dubois I, He H, Smith EN, Pellouin V, Petri HM, Rainaldi V, Nattermann M, Burgener S, Paczia N, Zarzycki J, Heinemann M, Bar-Even A, Erb TJ.	Nat Commun	10.1038/s41467-025-57549-4	2025
	Rapid Biodistribution of Fluorescent Outer-Membrane Vesicles from the Intestine to Distant Organs via the Blood in Mice.	Schaack B, Mercier C, Katby M, Hannani D, Vollaire J, Robert JS, Caffaratti C, Blanquet F, Nicoud O, Josserand V, Laurin D.	Int J Mol Sci	10.3390/ijms25031821	2024
Metabolism	Statistical considerations on the formation of circular photosynthetic light-harvesting complexes from Rhodopseudomonas palustris.	Taniguchi M, Henry S, Cogdell RJ, Lindsey JS.	Photosynth Res	10.1007/s11120-014-9975-x	2014
	Current overview of the mechanistic pathways and influence of physicochemical parameters on the microbial synthesis and applications of metallic nanoparticles.	Bhatnagar S, Aoyagi H.	Bioprocess Biosyst Eng	10.1007/s00449-025-03190-w	2025
Metabolism	A multiphase mixture model for substrate concentration distribution characteristics and photo-hydrogen production performance of the entrapped-cell photobioreactor.	Guo CL, Cao HX, Pei HS, Guo FQ, Liu DM.	Bioresour Technol	10.1016/j.biortech.2015.01.022	2015
	Mapping Protein-Protein Interactions at Birth: Single-Particle Cryo-EM Analysis of a Ribosome-Nascent Globin Complex.	Masse MM, Hutchinson RB, Morgan CE, Allaman HJ, Guan H, Yu EW, Cavagnero S.	ACS Cent Sci	10.1021/acscentsci.3c00777	2024
Metabolism	The purification of crude glycerol derived from biodiesel manufacture and its use as a substrate by Rhodopseudomonas palustris to produce hydrogen.	Pott RW, Howe CJ, Dennis JS.	Bioresour Technol	10.1016/j.biortech.2013.10.094	2014
	Selection of salt tolerant purple nonsulfur bacteria producing 5-aminolevulinic acid (ALA) and reducing methane emissions from microbial rice straw degradation	Nunkaew T, Kantachote D, Nitoda T, Kanzaki H.	Appl Soil Ecol	10.1016/j.apsoil.2014.10.005	2015
Pathogenicity	Quorum sensing-related activities of beneficial and pathogenic bacteria have important implications for plant and human health.	Hartmann A, Binder T, Rothballer M.	FEMS Microbiol Ecol	10.1093/femsec/fiae076	2024
	Probiotics, Proline and Calcium Induced Protective Responses of Triticum aestivum under Drought Stress.	Mockeviciute R, Jurkoniene S, Sveikauskas V, Zareyan M, Jankovska-Bortkevic E, Jankauskiene J, Kozeko L, Gaveliene V.	Plants (Basel)	10.3390/plants12061301	2023
Metabolism	Acyclic carotenoid and cyclic apocarotenoid cleavage by an orthologue of lignostilbene-alpha,beta-dioxygenase in Rhodopseudomonas palustris.	Maeda I, Inaba A, Koike H, Yoneyama K, Ueda S, Yoshida K.	J Biochem	10.1093/jb/mvt075	2013
	Expression, characterization, and immobilization of a novel SGNH esterase Est882 and its potential for pyrethroid degradation.	Zong W, Su W, Xie Q, Gu Q, Deng X, Ren Y, Li H.	Front Microbiol	10.3389/fmicb.2022.1069754	2022
Metabolism	Development of a low-cost culture medium for the rapid production of plant growth-promoting Rhodopseudomonas palustris strain PS3.	Lo KJ, Lee SK, Liu CT.	PLoS One	10.1371/journal.pone.0236739	2020
Pathogenicity	Proteome Response of a Metabolically Flexible Anoxygenic Phototroph to Fe(II) Oxidation.	Bryce C, Franz-Wachtel M, Nalpas NC, Miot J, Benzerara K, Byrne JM, Kleindienst S, Macek B, Kappler A.	Appl Environ Microbiol	10.1128/aem.01166-18	2018
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Genetics	Comparative Metagenomic Study of Rhizospheric and Bulk Mercury-Contaminated Soils in the Mining District of Almadén.	Gonzalez D, Robas M, Fernandez V, Barcena M, Probanza A, Jimenez PA.	Front Microbiol	10.3389/fmicb.2022.797444	2022
	The Long-Term Effects of Using Phosphate-Solubilizing Bacteria and Photosynthetic Bacteria as Biofertilizers on Peanut Yield and Soil Bacteria Community.	Wang Y, Peng S, Hua Q, Qiu C, Wu P, Liu X, Lin X.	Front Microbiol	10.3389/fmicb.2021.693535	2021
	Expression of V-nitrogenase and Fe-nitrogenase in Methanosarcina acetivorans is controlled by molybdenum, fixed nitrogen, and the expression of Mo-nitrogenase.	Chanderban M, Hill CA, Dhamad AE, Lessner DJ.	Appl Environ Microbiol	10.1128/aem.01033-23	2023
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	Effects of 5-aminolevulinic acid (ALA)-containing supernatants from selected Rhodopseudomonas palustris strains on rice growth under NaCl stress, with mediating effects on chlorophyll, photosynthetic electron transport and antioxidative enzymes	Nunkaew T, Kantachote D, Kanzaki H, Nitoda T, Ritchie RJ.	Electron J Biotechnol	10.1016/j.ejbt.2013.12.004	2014
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	Rhodopseudomonas palustris-based conversion of organic acids to hydrogen using plasmonic nanoparticles and near-infrared light.	Craven J, Sultan MA, Sultan MA, Sarma R, Wilson S, Meeks N, Kim DY, Hastings JT, Bhattacharyya D.	RSC Adv	10.1039/c9ra08747h	2019
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Metabolism	Study on anaerobic ammonium oxidation process coupled with denitrification microbial fuel cells (MFCs) and its microbial community analysis.	Li C, Ren H, Xu M, Cao J.	Bioresour Technol	10.1016/j.biortech.2014.10.156	2015
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Metabolism	Use of mixed culture bacteria for photofermentive hydrogen of dark fermentation effluent.	Tawfik A, Tawfik A, El-Bery H, Kumari S, Bux F.	Bioresour Technol	10.1016/j.biortech.2014.03.065	2014
Enzymology	Effects of probiotics on the growth performance and intestinal micro flora of broiler chickens.	Li YB, Xu QQ, Yang CJ, Yang X, Lv L, Yin CH, Liu XL, Yan H.	Pak J Pharm Sci		2014
	Characterization of Rhodopseudomonas palustris population dynamics on tobacco phyllosphere and induction of plant resistance to Tobacco mosaic virus.	Su P, Zhang D, Zhang Z, Chen A, Hamid MR, Li C, Du J, Cheng J, Tan X, Zhen L, Zhai Z, Tang W, Chen J, Zhou X, Liu Y.	Microb Biotechnol	10.1111/1751-7915.13486	2019
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Metabolism	Anaerobic Degradation of Syringic Acid by an Adapted Strain of Rhodopseudomonas palustris.	Oshlag JZ, Ma Y, Morse K, Burger BT, Lemke RA, Karlen SD, Myers KS, Donohue TJ, Noguera DR.	Appl Environ Microbiol	10.1128/aem.01888-19	2020
Metabolism	Characteristics of purple nonsulfur bacteria grown under Stevia residue extractions.	Xu J, Feng Y, Wang Y, Lin X.	Lett Appl Microbiol	10.1111/lam.12129	2013
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Metabolism	Cloning of two 5-aminolevulinic acid synthase isozymes HemA and HemO from Rhodopseudomonas palustris with favorable characteristics for 5-aminolevulinic acid production.	Zhang L, Chen J, Chen N, Sun J, Zheng P, Ma Y.	Biotechnol Lett	10.1007/s10529-013-1143-4	2013
Metabolism	[Influence of iron on siderophore and photosynthetic pigments biosynthesis by siderophore-producing Rhodopesudomonnas palustris].	Hu B, Zhao C, Yang S.	Wei Sheng Wu Xue Bao		2014
Biotechnology	Clades of Photosynthetic Bacteria Belonging to the Genus Rhodopseudomonas Show Marked Diversity in Light-Harvesting Antenna Complex Gene Composition and Expression.	Fixen KR, Oda Y, Harwood CS.	mSystems	10.1128/msystems.00006-15	2016
	Effects Induced by the Agricultural Application of Probiotics on Antioxidant Potential of Strawberries.	Mockeviciute R, Jurkoniene S, Gaveliene V, Jankovska-Bortkevic E, Socik B, Armalyte G, Budrys R.	Plants (Basel)	10.3390/plants11060831	2022
Metabolism	[Novel NADPH-dependent L-aspartate dehydrogenases from the mesophilic nitrogen-fixing bacteria Rhodopseudomonas palustris and Bradyrhizobium japonicum].	Kuvaeva TM, Katashkina ZhI, Kivero AD, Smirnov SV.	Prikl Biokhim Mikrobiol	10.7868/s0555109913010108	2013
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Metabolism	Carbon substrate re-orders relative growth of a bacterium using Mo-, V-, or Fe-nitrogenase for nitrogen fixation.	Luxem KE, Kraepiel AML, Zhang L, Waldbauer JR, Zhang X.	Environ Microbiol	10.1111/1462-2920.14955	2020
	Optimization of Encapsulation by Ionic Gelation Technique of Cryoconcentrated Solution: A Response Surface Methodology and Evaluation of Physicochemical Characteristics Study.	Guerra-Valle M, Petzold G, Orellana-Palma P.	Polymers (Basel)	10.3390/polym14051031	2022
	A Variant of the Sulfoglycolytic Transketolase Pathway for the Degradation of Sulfoquinovose into Sulfoacetate.	Chu R, Wei Y, Liu J, Li B, Zhang J, Zhou Y, Du Y, Zhang Y.	Appl Environ Microbiol	10.1128/aem.00617-23	2023
	Adjustment in the Composition and Organization of Proteus mirabilis Lipids during the Swarming Process	Stolarek P, Bernat P, Rozalski A.	Int J Mol Sci		2023
Metabolism	Photofermentation of crude glycerol from biodiesel using Rhodopseudomonas palustris: comparison with organic acids and the identification of inhibitory compounds.	Pott RW, Howe CJ, Dennis JS.	Bioresour Technol	10.1016/j.biortech.2012.11.126	2013
	Biofilm formation and cell plasticity drive diazotrophy in an anoxygenic phototrophic bacterium.	Fernandez-Juarez V, Hallstrom S, Pacherres CO, Wang J, Coll-Garcia G, Kuhl M, Riemann L.	Appl Environ Microbiol	10.1128/aem.01027-23	2023
Enzymology	[Photosynthetic bacteria of Rhodopseudomonas palustris isolated from river sediment].	Wang L, Tong H, Li J.	Wei Sheng Yan Jiu		2012
Metabolism	Different Metabolomic Responses to Carbon Starvation between Light and Dark Conditions in the Purple Photosynthetic Bacterium, Rhodopseudomonas palustris.	Kanno N, Matsuura K, Haruta S.	Microbes Environ	10.1264/jsme2.me17143	2018
Metabolism	Regulation of bacterial physiology by lysine acetylation of proteins.	Bernal V, Castano-Cerezo S, Gallego-Jara J, Ecija-Conesa A, de Diego T, Iborra JL, Canovas M.	N Biotechnol	10.1016/j.nbt.2014.03.002	2014
Genetics	Metagenomic analysis of the dynamical conversion of photosynthetic bacterial communities in different crop fields over different growth periods.	Cheng JE, Su P, Zhang ZH, Zheng LM, Wang ZY, Hamid MR, Dai JP, Du XH, Chen LJ, Zhai ZY, Kong XT, Liu Y, Zhang DY.	PLoS One	10.1371/journal.pone.0262517	2022
Genetics	Insights into ecological roles of uncultivated bacteria in Katase hot spring sediment from long-read metagenomics.	Kato S, Masuda S, Shibata A, Shirasu K, Ohkuma M.	Front Microbiol	10.3389/fmicb.2022.1045931	2022
Metabolism	A two-step fermentation of distillers' grains using Trichoderma viride and Rhodopseudomonas palustris for fish feed.	Zhang J, Zhang WX, Li SZ, You L, Zhang C, Sun CZ, Liu XB.	Bioprocess Biosyst Eng	10.1007/s00449-013-0887-5	2013
Pathogenicity	Adaptation mechanism and tolerance of Rhodopseudomonas palustris PSB-S under pyrazosulfuron-ethyl stress.	Luo XW, Zhang DY, Zhu TH, Zhou XG, Peng J, Zhang SB, Liu Y.	BMC Microbiol	10.1186/s12866-018-1361-y	2018
	Miltefosine and Nifuratel Combination: A Promising Therapy for the Treatment of Leishmania donovani Visceral Leishmaniasis.	Melcon-Fernandez E, Galli G, Garcia-Estrada C, Balana-Fouce R, Reguera RM, Perez-Pertejo Y.	Int J Mol Sci	10.3390/ijms24021635	2023
	A Mesorhizobium japonicum quorum sensing circuit that involves three linked genes and an unusual acyl-homoserine lactone signal.	Suo Z, Cummings DA, Puri AW, Schaefer AL, Greenberg EP.	mBio	10.1128/mbio.01010-23	2023
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Transcriptome	Transcriptome and Deletion Mutant Analyses Revealed that an RpoH Family Sigma Factor Is Essential for Photosystem Production in Roseateles depolymerans under Carbon Starvation.	Suyama T, Kanno N, Matsukura S, Chihara K, Noda N, Hanada S.	Microbes Environ	10.1264/jsme2.me22072	2023
Metabolism	Organic carbon recovery and photosynthetic bacteria population in an anaerobic membrane photo-bioreactor treating food processing wastewater.	Chitapornpan S, Chiemchaisri C, Chiemchaisri W, Honda R, Yamamoto K.	Bioresour Technol	10.1016/j.biortech.2013.02.048	2013
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	The identification and characterization of an oxalyl-CoA synthetase from grass pea (Lathyrus sativus L.).	Goldsmith M, Barad S, Peleg Y, Albeck S, Dym O, Brandis A, Mehlman T, Reich Z.	RSC Chem Biol	10.1039/d1cb00202c	2022
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Enzymology	Hup-Type Hydrogenases of Purple Bacteria: Homology Modeling and Computational Assessment of Biotechnological Potential.	Abdullatypov AV.	Int J Mol Sci	10.3390/ijms21010366	2020
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	Proteomic Time-Course Analysis of the Filamentous Anoxygenic Phototrophic Bacterium, Chloroflexus aurantiacus, during the Transition from Respiration to Phototrophy.	Kawai S, Shimamura S, Shimane Y, Tsukatani Y.	Microorganisms	10.3390/microorganisms10071288	2022
	Characterization of the Membrane-Associated Electron-Bifurcating Flavoenzyme EtfABCX from the Hyperthermophilic Bacterium Thermotoga maritima.	Ge X, Schut GJ, Tran J, Poole Ii FL, Niks D, Menjivar K, Hille R, Adams MWW.	Biochemistry	10.1021/acs.biochem.3c00473	2023
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Enzymology	Crystallization and preliminary X-ray analysis of the hypothetical deaminase RPB_0146 from Rhodopseudomonas palustris HaA2.	Zhang G, Yu D, Yang G, Dong H, Zhang T, Liu X.	Acta Crystallogr F Struct Biol Commun	10.1107/s2053230x14018391	2014
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Metabolism	Phosphoproteomic analysis of Rhodopseudomonas palustris reveals the role of pyruvate phosphate dikinase phosphorylation in lipid production.	Hu CW, Lin MH, Huang HC, Ku WC, Yi TH, Tsai CF, Chen YJ, Sugiyama N, Ishihama Y, Juan HF, Wu SH.	J Proteome Res	10.1021/pr300582p	2012
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	Structural insights into 3Fe-4S ferredoxins diversity in M. tuberculosis highlighted by a first redox complex with P450.	Gilep A, Varaksa T, Bukhdruker S, Kavaleuski A, Ryzhykau Y, Smolskaya S, Sushko T, Tsumoto K, Grabovec I, Kapranov I, Okhrimenko I, Marin E, Shevtsov M, Mishin A, Kovalev K, Kuklin A, Gordeliy V, Kaluzhskiy L, Gnedenko O, Yablokov E, Ivanov A, Borshchevskiy V, Strushkevich N.	Front Mol Biosci	10.3389/fmolb.2022.1100032	2022
Genetics	System-level analysis of metabolic trade-offs during anaerobic photoheterotrophic growth in Rhodopseudomonas palustris.	Navid A, Jiao Y, Wong SE, Pett-Ridge J.	BMC Bioinformatics	10.1186/s12859-019-2844-z	2019
Metabolism	Selective biosorption and recovery of Ruthenium from industrial effluents with Rhodopseudomonas palustris strains.	Colica G, Caparrotta S, De Philippis R.	Appl Microbiol Biotechnol	10.1007/s00253-012-4053-9	2012
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Metabolism	Changes in bacterial CO2 fixation with depth in agricultural soils.	Wu X, Ge T, Ge T, Yuan H, Li B, Zhu H, Zhou P, Sui F, O'Donnell AG, Wu J.	Appl Microbiol Biotechnol	10.1007/s00253-013-5179-0	2014
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	Structures of Rhodopseudomonas palustris RC-LH1 complexes with open or closed quinone channels.	Swainsbury DJK, Qian P, Jackson PJ, Faries KM, Niedzwiedzki DM, Martin EC, Farmer DA, Malone LA, Thompson RF, Ranson NA, Canniffe DP, Dickman MJ, Holten D, Kirmaier C, Hitchcock A, Hunter CN.	Sci Adv	10.1126/sciadv.abe2631	2021
Genetics	The Complete Genome of a Novel Typical Species Thiocapsa bogorovii and Analysis of Its Central Metabolic Pathways.	Petushkova E, Khasimov M, Mayorova E, Delegan Y, Frantsuzova E, Bogun A, Galkina E, Tsygankov A.	Microorganisms	10.3390/microorganisms12020391	2024
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Metabolism	Anaerobic utilization of phenanthrene by Rhodopseudomonas palustris.	Zhao L, Zhao C, Han D, Yang S, Chen S, Yu CP.	Biotechnol Lett	10.1007/s10529-011-0681-x	2011
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	Characterisation of the paramagnetic [2Fe-2S]+ centre in palustrisredoxin-B (PuxB) from Rhodopseudomonas palustris CGA009: g-matrix determination and spin coupling analysis.	Abdalla JA, Bowen AM, Bell SG, Wong LL, Timmel CR, Harmer J.	Phys Chem Chem Phys	10.1039/c2cp24112a	2012
Metabolism	Isolation and pigment composition of the reaction centers from purple photosynthetic bacterium Rhodopseudomonas palustris species.	Mizoguchi T, Isaji M, Harada J, Tamiaki H.	Biochim Biophys Acta	10.1016/j.bbabio.2011.12.001	2012
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	Characterisation of sequence-structure-function space in sensor-effector integrators of phytochrome-regulated diguanylate cyclases.	Bohm C, Gourinchas G, Zweytick S, Hujdur E, Reiter M, Trstenjak S, Sensen CW, Winkler A.	Photochem Photobiol Sci	10.1007/s43630-022-00255-7	2022
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Metabolism	Evaluation of transgenic tobacco plants expressing a bacterial Co-Ni transporter for acquisition of cobalt.	Nair S, Joshi-Saha A, Singh S, Ramachandran V, Singh S, Thorat V, Kaushik CP, Eapen S, D'Souza SF.	J Biotechnol	10.1016/j.jbiotec.2012.07.191	2012
	An atlas of the tissue and blood metagenome in cancer reveals novel links between bacteria, viruses and cancer.	Borchmann S.	Microbiome	10.1186/s40168-021-01039-4	2021
	Biodegradation of pharmaceuticals in photobioreactors - a systematic literature review.	Chojnacka K, Skrzypczak D, Izydorczyk G, Mikula K, Szopa D, Moustakas K, Witek-Krowiak A.	Bioengineered	10.1080/21655979.2022.2036906	2022
	Protein encapsulation within the internal cavity of a bacterioferritin.	Bradley JM, Gray E, Richardson J, Moore GR, Le Brun NE.	Nanoscale	10.1039/d2nr01780f	2022
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	Two-tiered mutualism improves survival and competitiveness of cross-feeding soil bacteria.	Ge ZB, Zhai ZQ, Xie WY, Dai J, Huang K, Johnson DR, Zhao FJ, Wang P, Wang P.	ISME J	10.1038/s41396-023-01519-5	2023
	PHA Production from Cheese Whey and "Scotta": Comparison between a Consortium and a Pure Culture of Leuconostoc mesenteroides.	Bosco F, Cirrincione S, Carletto R, Marmo L, Chiesa F, Mazzoli R, Pessione E.	Microorganisms	10.3390/microorganisms9122426	2021
Genetics	Genome-Scale Mutational Analysis of Cathode-Oxidizing Thioclava electrotropha ElOx9^T.	Sackett JD, Kamble N, Leach E, Schuelke T, Wilbanks E, Rowe AR.	Front Microbiol	10.3389/fmicb.2022.909824	2022
	Fermentative production of vitamin B₁₂ by Propionibacterium shermanii and Pseudomonas denitrificans and its promising health benefits: A review.	Tripathi A, Pandey VK, Panesar PS, Taufeeq A, Mishra H, Rustagi S, Malik S, Kovacs B, Suthar T, Shaikh AM.	Food Sci Nutr	10.1002/fsn3.4428	2024
	Draft genome sequence and overview of the purple non sulfur bacterium Rhodopseudomonas palustris 42OL.	Adessi A, Spini G, Presta L, Mengoni A, Viti C, Giovannetti L, Fani R, De Philippis R.	Stand Genomic Sci	10.1186/s40793-016-0145-y	2016
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	Engineering of optogenetic devices for biomedical applications in mammalian synthetic biology.	Guan N, Gao X, Ye H.	Eng Biol	10.1049/enb2.12022	2022
Metabolism	Covert Cross-Feeding Revealed by Genome-Wide Analysis of Fitness Determinants in a Synthetic Bacterial Mutualism.	LaSarre B, Deutschbauer AM, Love CE, McKinlay JB.	Appl Environ Microbiol	10.1128/aem.00543-20	2020
	A Secondary Metabolic Enzyme Functioned as an Evolutionary Seed of a Primary Metabolic Enzyme.	Kawaguchi J, Mori H, Iwai N, Wachi M.	Mol Biol Evol	10.1093/molbev/msac164	2022
	Glycerol biosynthetic pathway plays an essential role in proliferation and antioxidative defense in the human enteric protozoan parasite Entamoeba histolytica.	Jeelani G, Balogun EO, Husain A, Nozaki T.	Sci Rep	10.1038/s41598-023-40670-z	2023
Metabolism	Functional divergence of annotated l-isoaspartate O-methyltransferases in an alpha-proteobacterium.	Yin L, Harwood CS.	J Biol Chem	10.1074/jbc.ra118.006546	2019
Genetics	Metapangenomics of wild and cultivated banana microbiome reveals a plethora of host-associated protective functions.	Singh S, Aghdam SA, Lahowetz RM, Brown AMV.	Environ Microbiome	10.1186/s40793-023-00493-x	2023
Genetics	A 4-hydroxybenzoate 3-hydroxylase mutant enables 4-amino-3-hydroxybenzoic acid production from glucose in Corynebacterium glutamicum.	Nonaka K, Osamura T, Takahashi F.	Microb Cell Fact	10.1186/s12934-023-02179-y	2023
	Effects of probiotics on growth, survival, and intestinal and liver morphometry of Gangetic mystus (Mystus cavasius).	Gaffar MA, Zaman MK, Islam MS, Islam M, Hossain MK, Shahriar SIM, Shahjahan M.	Saudi J Biol Sci	10.1016/j.sjbs.2023.103683	2023
	Identification of the vibrational marker of tyrosine cation radical using ultrafast transient infrared spectroscopy of flavoprotein systems.	Pirisi K, Nag L, Fekete Z, Iuliano JN, Tolentino Collado J, Clark IP, Pecsi I, Sournia P, Liebl U, Greetham GM, Tonge PJ, Meech SR, Vos MH, Lukacs A.	Photochem Photobiol Sci	10.1007/s43630-021-00024-y	2021
	Cloning, expression, crystallization and crystallographic analysis of CouR from Rhodopseudomonas palustris.	Pan C, Hu YL, Jiang XN, Gai Y.	Acta Crystallogr F Struct Biol Commun	10.1107/s2053230x15018968	2015
	Recent Developments in Biological Processing Technology for Palm Oil Mill Effluent Treatment-A Review.	Dominic D, Baidurah S.	Biology (Basel)	10.3390/biology11040525	2022
Metabolism	Stoichiometric conversion of biodiesel derived crude glycerol to hydrogen: Response surface methodology study of the effects of light intensity and crude glycerol and glutamate concentration.	Ghosh D, Sobro IF, Hallenbeck PC.	Bioresour Technol	10.1016/j.biortech.2011.12.021	2012
Phylogeny	Evolution and Functional Analysis of orf1 Within nif Gene Cluster from Paenibacillus graminis RSA19.	Li Q, Liu X, Zhang H, Chen S.	Int J Mol Sci	10.3390/ijms20051145	2019
	Development of effective biotransformation process for benzohydroxamic acid production using Bacillus smithii IIIMB2907.	Sharma H, Singh RV, Ganjoo A, Kumar A, Singh R, Babu V.	3 Biotech	10.1007/s13205-022-03109-2	2022
Enzymology	Fluorescence blinking of the RC-LH1 complex from Rhodopseudomonas palustris.	Unterkofler S, Pflock T, Southall J, Cogdell RJ, Kohler J.	Chemphyschem	10.1002/cphc.201000588	2011
	Exogenously applied nitrogenous fertilizers and effective microorganisms improve plant growth of stevia (Stevia rebaudiana Bertoni) and soil fertility.	Youssef MA, Yousef AF, Ali MM, Ahmed AI, Lamlom SF, Strobel WR, Kalaji HM.	AMB Express	10.1186/s13568-021-01292-8	2021
Metabolism	Structural basis of transcriptional regulation by CouR, a repressor of coumarate catabolism, in Rhodopseudomonas palustris.	Cogan DP, Baraquet C, Harwood CS, Nair SK.	J Biol Chem	10.1074/jbc.ra118.003561	2018
	Characterization of DNA Processing Protein A (DprA) of the Radiation-Resistant Bacterium Deinococcus radiodurans.	Sharma DK, Misra HS, Soni I, Rajpurohit YS.	Microbiol Spectr	10.1128/spectrum.03470-22	2022
Metabolism	Posttranslational modification of a vanadium nitrogenase.	Heiniger EK, Harwood CS.	Microbiologyopen	10.1002/mbo3.265	2015
	Plant Microbial Biostimulants as a Promising Tool to Enhance the Productivity and Quality of Carrot Root Crops.	Gaveliene V, Socik B, Jankovska-Bortkevic E, Jurkoniene S.	Microorganisms	10.3390/microorganisms9091850	2021
Metabolism	Acetate-dependent photoheterotrophic growth and the differential requirement for the Calvin-Benson-Bassham reductive pentose phosphate cycle in Rhodobacter sphaeroides and Rhodopseudomonas palustris.	Laguna R, Tabita FR, Alber BE.	Arch Microbiol	10.1007/s00203-010-0652-y	2011
Metabolism	Small-Molecule Acetylation Controls the Degradation of Benzoate and Photosynthesis in Rhodopseudomonas palustris.	VanDrisse CM, Escalante-Semerena JC.	mBio	10.1128/mbio.01895-18	2018
	Nitrogen Fixation and Ammonium Assimilation Pathway Expression of Geobacter sulfurreducens Changes in Response to the Anode Potential in Microbial Electrochemical Cells.	Ortiz-Medina JF, Poole MR, Grunden AM, Call DF.	Appl Environ Microbiol	10.1128/aem.02073-22	2023
Metabolism	Monitoring of environmental arsenic by cultures of the photosynthetic bacterial sensor illuminated with a near-infrared light emitting diode array.	Maeda I, Sakurai H, Yoshida K, Siddiki M, Shimizu T, Fukami M, Ueda S.	J Microbiol Biotechnol	10.4014/jmb.1105.05017	2011
Metabolism	Phototrophic extracellular electron uptake is linked to carbon dioxide fixation in the bacterium Rhodopseudomonas palustris.	Guzman MS, Rengasamy K, Binkley MM, Jones C, Ranaivoarisoa TO, Singh R, Fike DA, Meacham JM, Bose A.	Nat Commun	10.1038/s41467-019-09377-6	2019
	Metabolic engineering of Rhodopseudomonas palustris for the obligate reduction of n-butyrate to n-butanol.	Doud DFR, Holmes EC, Richter H, Molitor B, Jander G, Angenent LT.	Biotechnol Biofuels	10.1186/s13068-017-0864-3	2017
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Metabolism	Phototropic H2 production by a newly isolated strain of Rhodopseudomonas palustris.	Suwansaard M, Choorit W, Zeilstra-Ryalls JH, Prasertsan P.	Biotechnol Lett	10.1007/s10529-010-0345-2	2010
Metabolism	Biotransformation of Benzoate to 2,4,6-Trihydroxybenzophenone by Engineered Escherichia coli.	Klamrak A, Nabnueangsap J, Nualkaew N.	Molecules	10.3390/molecules26092779	2021
	Hopanoids Confer Robustness to Physicochemical Variability in the Niche of the Plant Symbiont Bradyrhizobium diazoefficiens.	Tookmanian E, Junghans L, Kulkarni G, Ledermann R, Saenz J, Newman DK.	J Bacteriol	10.1128/jb.00442-21	2022
	Statistical Optimization of Novel Medium to Maximize the Yield of Exopolysaccharide From Lacticaseibacillus rhamnosus ZFM216 and Its Immunomodulatory Activity.	Chen L, Gu Q, Zhou T.	Front Nutr	10.3389/fnut.2022.924495	2022
Metabolism	Influence of Energy and Electron Availability on In Vivo Methane and Hydrogen Production by a Variant Molybdenum Nitrogenase.	Zheng Y, Harwood CS.	Appl Environ Microbiol	10.1128/aem.02671-18	2019
Metabolism	Characteristics of hydrogen production and substrate consumption of Rhodopseudomonas palustris CQK 01 in an immobilized-cell photobioreactor.	Wang YZ, Liao Q, Zhu X, Tian X, Zhang C.	Bioresour Technol	10.1016/j.biortech.2010.01.045	2010
	Evaluation of Biocompatibility and Antagonistic Properties of Microorganisms Isolated from Natural Sources for Obtaining Biofertilizers Using Microalgae Hydrolysate.	Babich O, Sukhikh S, Dyshlyuk L, Shishko O, Milentyeva I, Prosekov A, Pavsky V, Ivanova S, Dolganyuk V.	Microorganisms	10.3390/microorganisms9081667	2021
	Porphyromonas gingivalis Tyrosine Kinase Is a Fitness Determinant in Polymicrobial Infections.	Perpich JD, Yakoumatos L, Stocke KS, Lewin GR, Ramos A, Yoder-Himes DR, Whiteley M, Lamont RJ.	Infect Immun	10.1128/iai.00170-22	2022
	Beyond the snapshot: identification of the timeless, enduring indicator microbiome informing soil fertility and crop production in alkaline soils.	Zhang J, Dolfing J, Liu W, Chen R, Zhang J, Lin X, Feng Y.	Environ Microbiome	10.1186/s40793-022-00420-6	2022
	Bioinspired micro- and nanostructured systems for cancer therapy.	Yang R, Zhang B, Fei X, Cong S, Zhao S, Zhou T, Shen Y.	MedComm (2020)	10.1002/mco2.70025	2024
	De novo design of proteins housing excitonically coupled chlorophyll special pairs.	Ennist NM, Wang S, Kennedy MA, Curti M, Sutherland GA, Vasilev C, Redler RL, Maffeis V, Shareef S, Sica AV, Hua AS, Deshmukh AP, Moyer AP, Hicks DR, Swartz AZ, Cacho RA, Novy N, Bera AK, Kang A, Sankaran B, Johnson MP, Phadkule A, Reppert M, Ekiert D, Bhabha G, Stewart L, Caram JR, Stoddard BL, Stoddard BL, Romero E, Hunter CN, Baker D.	Nat Chem Biol	10.1038/s41589-024-01626-0	2024
Metabolism	Biochemical and physiological characterization of a BLUF protein-EAL protein complex involved in blue light-dependent degradation of cyclic diguanylate in the purple bacterium Rhodopseudomonas palustris.	Kanazawa T, Ren S, Maekawa M, Hasegawa K, Arisaka F, Hyodo M, Hayakawa Y, Ohta H, Masuda S.	Biochemistry	10.1021/bi101448t	2010
Metabolism	Effects of Supplement of Marichromatium gracile YL28 on Water Quality and Microbial Structures in Shrimp Mariculture Ecosystems.	Cui L, Zhu B, Zhang X, Chan Z, Zhao C, Zeng R, Yang S, Chen S.	Genes (Basel)	10.3390/genes12010040	2020
	Recent Progress in Designing Nanomaterial Biohybrids for Artificial Photosynthesis.	Jeevanandham S, Ramasundaram S, Vijay N, Oh TH, Selvan ST.	Nanomaterials (Basel)	10.3390/nano15100730	2025
Metabolism	Bacteriophytochrome-dependent regulation of light-harvesting complexes in Rhodopseudomonas palustris anaerobic cultures.	Li M, Noll S, Beatty JT.	Curr Microbiol	10.1007/s00284-010-9634-1	2010
Genetics	Whole-genome sequencing and comparative analysis of two plant-associated strains of Rhodopseudomonas palustris (PS3 and YSC3).	Lo KJ, Lin SS, Lu CW, Kuo CH, Liu CT.	Sci Rep	10.1038/s41598-018-31128-8	2018
	Differences in survivability under starvation conditions among four species of purple nonsulfur phototrophic bacteria.	Kanno N, Matsuura K, Haruta S.	Microbes Environ	10.1264/jsme2.me14013	2014
Metabolism	Reduction of selenite to red elemental selenium by Rhodopseudomonas palustris strain N.	Li B, Liu N, Li Y, Jing W, Fan J, Li D, Zhang L, Zhang X, Zhang Z, Wang L.	PLoS One	10.1371/journal.pone.0095955	2014
	Isophthalate:coenzyme A ligase initiates anaerobic degradation of xenobiotic isophthalate.	Junghare M, Frey J, Naji KM, Spiteller D, Vaaje-Kolstad G, Schink B.	BMC Microbiol	10.1186/s12866-022-02630-x	2022
Metabolism	A distinct pathway for tetrahymanol synthesis in bacteria.	Banta AB, Wei JH, Welander PV.	Proc Natl Acad Sci U S A	10.1073/pnas.1511482112	2015
	Effects of Prebiotics and Probiotics on Honey Bees (Apis mellifera) Infected with the Microsporidian Parasite Nosema ceranae.	Borges D, Guzman-Novoa E, Goodwin PH.	Microorganisms	10.3390/microorganisms9030481	2021
Metabolism	Long-term field fertilization alters the diversity of autotrophic bacteria based on the ribulose-1,5-biphosphate carboxylase/oxygenase (RubisCO) large-subunit genes in paddy soil.	Yuan H, Ge T, Ge T, Wu X, Liu S, Tong C, Qin H, Wu M, Wei W, Wu J.	Appl Microbiol Biotechnol	10.1007/s00253-011-3760-y	2012
	A Novel Soluble Squalene-Hopene Cyclase and Its Application in Efficient Synthesis of Hopene.	Liu Z, Zhang Y, Sun J, Huang WC, Xue C, Mao X.	Front Bioeng Biotechnol	10.3389/fbioe.2020.00426	2020
	Soil Application of Effective Microorganisms (EM) Maintains Leaf Photosynthetic Efficiency, Increases Seed Yield and Quality Traits of Bean (Phaseolus vulgaris L.) Plants Grown on Different Substrates.	Iriti M, Scarafoni A, Pierce S, Castorina G, Vitalini S.	Int J Mol Sci	10.3390/ijms20092327	2019
	Synthetic Homoserine Lactone Sensors for Gram-Positive Bacillus subtilis Using LuxR-Type Regulators.	Zeng M, Sarker B, Howitz N, Shah I, Andrews LB.	ACS Synth Biol	10.1021/acssynbio.3c00504	2024
Metabolism	Arsenic removal from contaminated soil via biovolatilization by genetically engineered bacteria under laboratory conditions.	Liu S, Zhang F, Chen J, Sun G.	J Environ Sci (China)	10.1016/s1001-0742(10)60570-0	2011
	Green energy from Rhodopseudomonas palustris grown at low to high irradiance values, under fed-batch operational conditions.	Carlozzi P, Pintucci C, Piccardi R, Buccioni A, Minieri S, Lambardi M.	Biotechnol Lett	10.1007/s10529-009-0183-2	2010
Metabolism	Glucose Metabolism and Acetate Switch in Archaea: the Enzymes in Haloferax volcanii.	Kuprat T, Ortjohann M, Johnsen U, Schonheit P.	J Bacteriol	10.1128/jb.00690-20	2021
	The Succession of Bacterial Community Attached on Biodegradable Plastic Mulches During the Degradation in Soil.	Ju Z, Du X, Feng K, Li S, Gu S, Jin D, Deng Y.	Front Microbiol	10.3389/fmicb.2021.785737	2021
	The Critical Role of Environmental Synergies in the Creation of Bionanohybrid Microbes.	Barnes RJ, Voegtlin SP, Hubert CRJ, Larter SR, Bryant SL.	Appl Environ Microbiol	10.1128/aem.02321-21	2022
Enzymology	Isolation and properties of malic enzyme and its gene in Rhodopseudomonas palustris No. 7.	Sato I, Yoshikawa J, Furusawa A, Chiku K, Amachi S, Fujii T.	Biosci Biotechnol Biochem	10.1271/bbb.90566	2010
Metabolism	Synthesis of acridone derivatives via heterologous expression of a plant type III polyketide synthase in Escherichia coli.	Choi GS, Choo HJ, Kim BG, Ahn JH.	Microb Cell Fact	10.1186/s12934-020-01331-2	2020
	Extended conformations of bifurcating electron transfer flavoprotein constitute up to half the population, possibly mediating conformational change.	Khan SA, Hicks A, Leite WC, Byrnes J, Gorai B, Mroginski MA, O'Neill H, Miller AF.	Chem Sci	10.1039/d4sc04544k	2024
	Transition Metals Induce Quenching of Monomeric Near-Infrared Fluorescent Proteins.	Zhao H, Zastrow ML.	Biochemistry	10.1021/acs.biochem.1c00705	2022
Metabolism	Quorum Sensing Signaling Molecules Positively Regulate c-di-GMP Effector PelD Encoding Gene and PEL Exopolysaccharide Biosynthesis in Extremophile Bacterium Acidithiobacillus thiooxidans.	Diaz M, San Martin D, Castro M, Vera M, Guiliani N.	Genes (Basel)	10.3390/genes12010069	2021
Metabolism	FixK, a global regulator of microaerobic growth, controls photosynthesis in Rhodopseudomonas palustris.	Rey FE, Harwood CS.	Mol Microbiol	10.1111/j.1365-2958.2009.07037.x	2010
	Developing Multi-Copy Chromosomal Integration Strategies for Heterologous Biosynthesis of Caffeic Acid in Saccharomyces cerevisiae.	Qi H, Yu L, Li Y, Cai M, He J, Liu J, Hao L, Xu H, Qiao M.	Front Microbiol	10.3389/fmicb.2022.851706	2022
Metabolism	Construction and characterization of a photosynthetic bacterium genetically engineered for Hg2+ uptake.	Deng X, Jia P.	Bioresour Technol	10.1016/j.biortech.2010.10.051	2011
Metabolism	Progress toward a biomimetic leaf: 4,000 h of hydrogen production by coating-stabilized nongrowing photosynthetic Rhodopseudomonas palustris.	Gosse JL, Engel BJ, Hui JC, Harwood CS, Flickinger MC, Flickinger MC.	Biotechnol Prog	10.1002/btpr.406	2010
	Phylosymbiosis in the Rhizosphere Microbiome Extends to Nitrogen Cycle Functional Potential.	Van Bel M, Fisher AE, Ball L, Columbus JT, Berlemont R.	Microorganisms	10.3390/microorganisms9122476	2021
	Cost-effective process for the production of Monascus pigments using potato pomace as carbon source by fed-batch submerged fermentation.	Chen X, Chen M, Wu X, Li X.	Food Sci Nutr	10.1002/fsn3.2496	2021
	Engineering a Highly Efficient Carboligase for Synthetic One-Carbon Metabolism.	Nattermann M, Burgener S, Pfister P, Chou A, Schulz L, Lee SH, Paczia N, Zarzycki J, Gonzalez R, Erb TJ.	ACS Catal	10.1021/acscatal.1c01237	2021
	Effects of live yeast on differential genetic and functional attributes of rumen microbiota in beef cattle.	Ogunade IM, Lay J, Andries K, McManus CJ, Bebe F.	J Anim Sci Biotechnol	10.1186/s40104-019-0378-x	2019
Phylogeny	Bacterial genome chimaerism and the origin of mitochondria.	Abhishek A, Bavishi A, Bavishi A, Choudhary M.	Can J Microbiol	10.1139/w10-099	2011
	Optogenetic manipulation and photoacoustic imaging using a near-infrared transgenic mouse model.	Kasatkina LA, Ma C, Matlashov ME, Vu T, Li M, Kaberniuk AA, Yao J, Verkhusha VV.	Nat Commun	10.1038/s41467-022-30547-6	2022
Metabolism	An Escherichia coli Nitrogen Starvation Response Is Important for Mutualistic Coexistence with Rhodopseudomonas palustris.	McCully AL, Behringer MG, Gliessman JR, Pilipenko EV, Mazny JL, Lynch M, Drummond DA, McKinlay JB.	Appl Environ Microbiol	10.1128/aem.00404-18	2018
Genetics	Single-Genotype Syntrophy by Rhodopseudomonas palustris Is Not a Strategy to Aid Redox Balance during Anaerobic Degradation of Lignin Monomers.	Doud DF, Angenent LT.	Front Microbiol	10.3389/fmicb.2016.01082	2016
	Nuclear Localization Signals for Optimization of Genetically Encoded Tools in Neurons.	Karasev MM, Baloban M, Verkhusha VV, Shcherbakova DM.	Front Cell Dev Biol	10.3389/fcell.2022.931237	2022
Metabolism	Biocatalytic synthesis of dihydroxynaphthoic acids by cytochrome P450 CYP199A2.	Furuya T, Kino K.	Biosci Biotechnol Biochem	10.1271/bbb.90624	2009
Phylogeny	[Biological characteristics and phylogenetic analysis of a denitrifying photosynthetic bacterium].	Chen H, Zhang D, Wang L, Pan Z.	Wei Sheng Wu Xue Bao		2011
Metabolism	Energy transfer in an LH4-like light harvesting complex from the aerobic purple photosynthetic bacterium Roseobacter denitrificans.	Niedzwiedzki DM, Fuciman M, Frank HA, Blankenship RE.	Biochim Biophys Acta	10.1016/j.bbabio.2011.03.004	2011
	Tuning photosynthetic oxygen for hydrogen evolution in synergistically integrated, sulfur deprived consortia of Coccomyxa chodatii and Rhodobium gokarnense at dim and high light.	Danial AW, Abdel-Basset R, Abdel-Kader HAA.	Photosynth Res	10.1007/s11120-022-00961-4	2023
Metabolism	Selective oxidative demethylation of veratric acid to vanillic acid by CYP199A4 from Rhodopseudomonas palustris HaA2.	Bell SG, Tan AB, Johnson EO, Wong LL.	Mol Biosyst	10.1039/b913487e	2010
	Structural and biochemical characterization of the key components of an auxin degradation operon from the rhizosphere bacterium Variovorax.	Ma Y, Li X, Wang F, Zhang L, Zhou S, Che X, Yu D, Liu X, Li Z, Sun H, Yu G, Zhang H.	PLoS Biol	10.1371/journal.pbio.3002189	2023
Genetics	The Postmedieval Latvian Oral Microbiome in the Context of Modern Dental Calculus and Modern Dental Plaque Microbial Profiles.	Kazarina A, Petersone-Gordina E, Kimsis J, Kuzmicka J, Zayakin P, Griskjans Z, Gerhards G, Ranka R.	Genes (Basel)	10.3390/genes12020309	2021
Enzymology	[Isolation and purification of malate dehydrogenase isoforms from phototrophic purple bacteria Rhodobacter sphaeroides and Rhodopseudomonas palustris].	Eprintsev AT, Klimova MA, Shikhalieva KD, Kompantseva EI.	Izv Akad Nauk Ser Biol	10.1134/s1062359008060046	2008
Metabolism	Culture of attached and suspended Rhodopseudomonas faecalis in the presence of decomposing fish feed.	Wang X, Liu X, Lu S, Liu C, Gu Z, Zeng X, Ni Q.	Microbiologyopen	10.1002/mbo3.924	2019
Transcriptome	The effect of bile acids on the growth and global gene expression profiles in Akkermansia muciniphila.	Hagi T, Geerlings SY, Nijsse B, Belzer C.	Appl Microbiol Biotechnol	10.1007/s00253-020-10976-3	2020
	Aerobic-anaerobic transition boosts poly(3-hydroxybutyrate-co-3-hydroxyvalerate) synthesis in Rhodospirillum rubrum: the key role of carbon dioxide.	Godoy MS, de Miguel SR, Prieto MA.	Microb Cell Fact	10.1186/s12934-023-02045-x	2023
	Salt Tolerance Mechanism of the Rhizosphere Bacterium JZ-GX1 and Its Effects on Tomato Seed Germination and Seedling Growth.	Li PS, Kong WL, Wu XQ.	Front Microbiol	10.3389/fmicb.2021.657238	2021
	Red light-induced structure changes in phytochrome A from Pisum sativum.	Oide M, Nakasako M.	Sci Rep	10.1038/s41598-021-82544-2	2021
	Computational structure prediction provides a plausible mechanism for electron transfer by the outer membrane protein Cyc2 from Acidithiobacillus ferrooxidans.	Jiang V, Khare SD, Banta S.	Protein Sci	10.1002/pro.4106	2021
Metabolism	Protein recognition in ferredoxin-P450 electron transfer in the class I CYP199A2 system from Rhodopseudomonas palustris.	Bell SG, Xu F, Johnson EO, Forward IM, Bartlam M, Rao Z, Wong LL.	J Biol Inorg Chem	10.1007/s00775-009-0604-7	2010
	Importance of N-Acyl-Homoserine Lactone-Based Quorum Sensing and Quorum Quenching in Pathogen Control and Plant Growth Promotion.	Hartmann A, Klink S, Rothballer M.	Pathogens	10.3390/pathogens10121561	2021
	A Novel Electrophototrophic Bacterium Rhodopseudomonas palustris Strain RP2, Exhibits Hydrocarbonoclastic Potential in Anaerobic Environments.	Venkidusamy K, Megharaj M.	Front Microbiol	10.3389/fmicb.2016.01071	2016
	High-yield 'one-pot' biosynthesis of raspberry ketone, a high-value fine chemical.	Moore SJ, Tosi T, Bell D, Hleba YB, Polizzi KM, Freemont PS.	Synth Biol (Oxf)	10.1093/synbio/ysab021	2021
Genetics	The NMR solution structure and function of RPA3313: a putative ribosomal transport protein from Rhodopseudomonas palustris.	Catazaro J, Lowe AJ, Cerny RL, Powers R.	Proteins	10.1002/prot.25201	2017
Metabolism	A Rhizobiales-Specific Unipolar Polysaccharide Adhesin Contributes to Rhodopseudomonas palustris Biofilm Formation across Diverse Photoheterotrophic Conditions.	Fritts RK, LaSarre B, Stoner AM, Posto AL, McKinlay JB.	Appl Environ Microbiol	10.1128/aem.03035-16	2017
Genetics	Conservation of Energetic Pathways for Electroautotrophy in the Uncultivated Candidate Order Tenderiales.	Eddie BJ, Bird LJ, Pelikan C, Mussmann M, Martinez-Perez C, Pinamang P, Malanoski AP, Glaven SM.	mSphere	10.1128/msphere.00223-22	2022
Genetics	Metagenomic Insights Into Functional and Taxonomic Compositions of an Activated Sludge Microbial Community Treating Leachate of a Completed Landfill: A Pathway-Based Analysis.	Yasuda S, Suenaga T, Orschler L, Agrawal S, Lackner S, Terada A.	Front Microbiol	10.3389/fmicb.2021.640848	2021
Metabolism	Production of bio-fuels (hydrogen and lipids) through a photofermentation process.	Carlozzi P, Buccioni A, Minieri S, Pushparaj B, Piccardi R, Ena A, Pintucci C.	Bioresour Technol	10.1016/j.biortech.2009.12.049	2010
	Insights into arsenic multi-operons expression and resistance mechanisms in Rhodopseudomonas palustris CGA009.	Zhao C, Zhang Y, Chan Z, Chen S, Yang S.	Front Microbiol	10.3389/fmicb.2015.00986	2015
	Microbial community in microbial fuel cell (MFC) medium and effluent enriched with purple photosynthetic bacterium (Rhodopseudomonas sp.).	Park TJ, Ding W, Cheng S, Brar MS, Ma AP, Tun HM, Leung FC.	AMB Express	10.1186/s13568-014-0022-2	2014
Enzymology	Crystal structure of a ferredoxin reductase for the CYP199A2 system from Rhodopseudomonas palustris.	Xu F, Bell SG, Peng Y, Johnson EO, Bartlam M, Rao Z, Wong LL.	Proteins	10.1002/prot.22510	2009
	Lack of the Bacterial Phytochrome Protein Decreases Deinococcus radiodurans Resistance to Mitomycin C.	Jung JH, Jeong S, Im S, Kim MK, Seo HS, Lim S.	Front Microbiol	10.3389/fmicb.2021.659233	2021
	Improved mini-Tn7 Delivery Plasmids for Fluorescent Labeling of Stenotrophomonas maltophilia.	Mamat U, Hein M, Grella D, Taylor CS, Scholzen T, Alio I, Streit WR, Huedo P, Coves X, Conchillo-Sole O, Gomez AC, Gibert I, Yero D, Schaible UE.	Appl Environ Microbiol	10.1128/aem.00317-23	2023
Metabolism	Biosynthesis of cadmium sulfide nanoparticles by photosynthetic bacteria Rhodopseudomonas palustris.	Bai HJ, Zhang ZM, Guo Y, Yang GE.	Colloids Surf B Biointerfaces	10.1016/j.colsurfb.2008.12.025	2009
Metabolism	Studies of interaction of homo-dimeric ferredoxin-NAD(P)+ oxidoreductases of Bacillus subtilis and Rhodopseudomonas palustris, that are closely related to thioredoxin reductases in amino acid sequence, with ferredoxins and pyridine nucleotide coenzymes.	Seo D, Okabe S, Yanase M, Kataoka K, Sakurai T.	Biochim Biophys Acta	10.1016/j.bbapap.2008.12.014	2009
	A red-green photochromic bacterial protein as a new contrast agent for improved photoacoustic imaging.	Garzella F, Bianchini P, Diaspro A, Losi A, Gartner W, Abbruzzetti S, Viappiani C.	Photoacoustics	10.1016/j.pacs.2022.100358	2022
Metabolism	Integrative control of carbon, nitrogen, hydrogen, and sulfur metabolism: the central role of the Calvin-Benson-Bassham cycle.	Laguna R, Joshi GS, Dangel AW, Luther AK, Tabita FR.	Adv Exp Med Biol	10.1007/978-1-4419-1528-3_15	2010
	Biophysical analysis of the structural evolution of substrate specificity in RuBisCO.	Poudel S, Pike DH, Raanan H, Mancini JA, Nanda V, Rickaby REM, Falkowski PG.	Proc Natl Acad Sci U S A	10.1073/pnas.2018939117	2020
Enzymology	Regioselective oxidation of indole- and quinolinecarboxylic acids by cytochrome P450 CYP199A2.	Furuya T, Kino K.	Appl Microbiol Biotechnol	10.1007/s00253-009-2207-1	2010
Metabolism	[Regulation of carbon flows in the tricarboxylic acid cycle-glyoxylate bypass system in Rhodopseudomonas palustris under different growth conditions].	Eprintsev AT, Klimova MA, Falaleeva MI, Kompantseva EI.	Mikrobiologiia	10.1134/s0026261708020021	2008
	Structural plasticity enables evolution and innovation of RuBisCO assemblies.	Liu AK, Pereira JH, Kehl AJ, Rosenberg DJ, Orr DJ, Chu SKS, Banda DM, Hammel M, Adams PD, Siegel JB, Shih PM.	Sci Adv	10.1126/sciadv.adc9440	2022
Biotechnology	Cadmium Sulfide Nanoparticles: Preparation, Characterization, and Biomedical Applications.	Ghasempour A, Dehghan H, Ataee M, Chen B, Zhao Z, Sedighi M, Guo X, Shahbazi MA.	Molecules	10.3390/molecules28093857	2023
Metabolism	Structure of the response regulator RPA3017 involved in red-light signaling in Rhodopseudomonas palustris.	Yang X, Zeng X, Moffat K, Yang X.	Acta Crystallogr F Struct Biol Commun	10.1107/s2053230x15014661	2015
Metabolism	Arsenic Methylation and its Relationship to Abundance and Diversity of arsM Genes in Composting Manure.	Zhai W, Wong MT, Luo F, Hashmi MZ, Liu X, Edwards EA, Tang X, Xu J.	Sci Rep	10.1038/srep42198	2017
	The Shifts of Diazotrophic Communities in Spring and Summer Associated with Coral Galaxea astreata, Pavona decussata, and Porites lutea.	Zhang Y, Yang Q, Ling J, Van Nostrand JD, Shi Z, Zhou J, Dong J.	Front Microbiol	10.3389/fmicb.2016.01870	2016
	Light-induced complex formation of bacteriophytochrome RpBphP1 and gene repressor RpPpsR2 probed by SAXS.	Papiz MZ, Bellini D, Evans K, Grossmann JG, Fordham-Skelton T.	FEBS J	10.1111/febs.14973	2019
Metabolism	[Assembly of LH2 light-harvesting complexes in Rhodopseudomonas palustris cells illuminated by blue and red light].	Makhneva ZK, Erokhin IuE, Moskalenko AA.	Mikrobiologiia	10.1134/s0026261708030144	2008
	Enhanced nutrient uptake is sufficient to drive emergent cross-feeding between bacteria in a synthetic community.	Fritts RK, Bird JT, Behringer MG, Lipzen A, Martin J, Lynch M, McKinlay JB.	ISME J	10.1038/s41396-020-00737-5	2020
	A Bacterial Symbiont Protects Honey Bees from Fungal Disease.	Miller DL, Smith EA, Newton ILG.	mBio	10.1128/mbio.00503-21	2021
	Construction of a Geobacter Strain With Exceptional Growth on Cathodes.	Ueki T, Nevin KP, Woodard TL, Aklujkar MA, Holmes DE, Lovley DR.	Front Microbiol	10.3389/fmicb.2018.01512	2018
	Identification of protein W, the elusive sixth subunit of the Rhodopseudomonas palustris reaction center-light harvesting 1 core complex.	Jackson PJ, Hitchcock A, Swainsbury DJK, Qian P, Martin EC, Farmer DA, Dickman MJ, Canniffe DP, Hunter CN.	Biochim Biophys Acta Bioenerg	10.1016/j.bbabio.2017.11.001	2018
	Phytochromes in Agrobacterium fabrum.	Lamparter T, Xue P, Elkurdi A, Kaeser G, Sauthof L, Scheerer P, Krauss N.	Front Plant Sci	10.3389/fpls.2021.642801	2021
Metabolism	Synechocystis KaiC3 Displays Temperature- and KaiB-Dependent ATPase Activity and Is Important for Growth in Darkness.	Wiegard A, Kobler C, Oyama K, Dorrich AK, Azai C, Terauchi K, Wilde A, Axmann IM.	J Bacteriol	10.1128/jb.00478-19	2020
	Microbially Mediated Methylation of Arsenic in the Arsenic-Rich Soils and Sediments of Jianghan Plain.	Zeng XC, Yang Y, Shi W, Peng Z, Chen X, Zhu X, Wang Y.	Front Microbiol	10.3389/fmicb.2018.01389	2018
Genetics	Catabolic Machinery of the Human Gut Microbes Bestow Resilience Against Vanillin Antimicrobial Nature.	Yadav M, Pandey R, Chauhan NS.	Front Microbiol	10.3389/fmicb.2020.588545	2020
	Overexpression of enzymes in glycolysis and energy metabolic pathways to enhance coenzyme Q10 production in Rhodobacter sphaeroides VK-2-3.	Zhang L, Li YL, Hu JH, Liu ZY.	Front Microbiol	10.3389/fmicb.2022.931470	2022
Metabolism	Heterologous caffeic acid biosynthesis in Escherichia coli is affected by choice of tyrosine ammonia lyase and redox partners for bacterial Cytochrome P450.	Haslinger K, Prather KLJ.	Microb Cell Fact	10.1186/s12934-020-01300-9	2020
Enzymology	An Exploration of Common Greenhouse Gas Emissions by the Cyanobiont of the Azolla-Nostoc Symbiosis and Clues as to Nod Factors in Cyanobacteria.	Gunawardana D.	Plants (Basel)	10.3390/plants8120587	2019
Enzymology	Purification, crystallization and preliminary crystallographic analysis of CYP 195A2, a P450 enzyme from Rhodopseudomonas palustris.	Guo D, Xu F, Bell SG, Pang X, Bartlam M, Wong LL.	Protein Pept Lett	10.2174/092986608784246470	2008
Metabolism	Response of Methanogen Communities to the Elevation of Cathode Potentials in Bioelectrochemical Reactors Amended with Magnetite.	Gao K, Wang X, Huang J, Xia X, Lu Y.	Appl Environ Microbiol	10.1128/aem.01488-21	2021
Metabolism	Change in microbial communities in acetate- and glucose-fed microbial fuel cells in the presence of light.	Xing D, Cheng S, Regan JM, Logan BE.	Biosens Bioelectron	10.1016/j.bios.2009.06.013	2009
Proteome	The Acyl-Proteome of Syntrophus aciditrophicus Reveals Metabolic Relationships in Benzoate Degradation.	Muroski JM, Fu JY, Nguyen HH, Wofford NQ, Mouttaki H, James KL, McInerney MJ, Gunsalus RP, Loo JA, Ogorzalek Loo RR.	Mol Cell Proteomics	10.1016/j.mcpro.2022.100215	2022
	Bioaugmentation for electricity generation from corn stover biomass using microbial fuel cells.	Wang X, Feng Y, Wang H, Qu Y, Yu Y, Ren N, Li N, Wang E, Lee H, Logan BE.	Environ Sci Technol	10.1021/es900391b	2009
	Coapplication of Effective Microorganisms and Nanomagnesium Boosts the Agronomic, Physio-Biochemical, Osmolytes, and Antioxidants Defenses Against Salt Stress in Ipomoea batatas.	Abd El-Mageed TA, Gyushi MAH, Hemida KA, El-Saadony MT, Abd El-Mageed SA, Abdalla H, AbuQamar SF, El-Tarabily KA, Abdelkhalik A.	Front Plant Sci	10.3389/fpls.2022.883274	2022
Metabolism	Metabolism of Multiple Aromatic Compounds in Corn Stover Hydrolysate by Rhodopseudomonas palustris.	Austin S, Kontur WS, Ulbrich A, Oshlag JZ, Zhang W, Higbee A, Zhang Y, Coon JJ, Hodge DB, Donohue TJ, Noguera DR.	Environ Sci Technol	10.1021/acs.est.5b02062	2015
	High yield conversion of a crude glycerol fraction from biodiesel production to hydrogen by photofermentation.	Sabourin-Provost G, Hallenbeck PC.	Bioresour Technol	10.1016/j.biortech.2009.03.027	2009
Metabolism	Construction of engineered RuBisCO Kluyveromyces marxianus for a dual microbial bioethanol production system.	Ha-Tran DM, Lai RY, Nguyen TTM, Huang E, Lo SC, Huang CC.	PLoS One	10.1371/journal.pone.0247135	2021
	Denatured State Conformational Biases in Three-Helix Bundles Containing Divergent Sequences Localize near Turns and Helix Capping Residues.	Leavens MJ, Spang LE, Cherney MM, Bowler BE.	Biochemistry	10.1021/acs.biochem.1c00400	2021
Metabolism	Bacterial Longevity Requires Protein Synthesis and a Stringent Response.	Yin L, Ma H, Nakayasu ES, Payne SH, Morris DR, Harwood CS.	mBio	10.1128/mbio.02189-19	2019
	Effective Microorganisms (EM) Improve Internal Organ Morphology, Intestinal Morphometry and Serum Biochemical Activity in Japanese Quails under Clostridium perfringens Challenge.	Michalska K, Gesek M, Sokol R, Murawska D, Mikiewicz M, Chlodowska A.	Molecules	10.3390/molecules26092786	2021
	Effects of pH on the peripheral light-harvesting antenna complex for Rhodopseudomonas palustris.	Feng J, Li X, Liu Y.	Sci China C Life Sci	10.1007/s11427-008-0093-x	2008
Metabolism	Light-driven carbon dioxide reduction to methane by nitrogenase in a photosynthetic bacterium.	Fixen KR, Zheng Y, Harris DF, Shaw S, Yang ZY, Dean DR, Seefeldt LC, Harwood CS.	Proc Natl Acad Sci U S A	10.1073/pnas.1611043113	2016
Metabolism	Development of bacteria-based bioassays for arsenic detection in natural waters.	Diesel E, Schreiber M, van der Meer JR.	Anal Bioanal Chem	10.1007/s00216-009-2785-x	2009
Metabolism	Sirtuin-Dependent Reversible Lysine Acetylation Controls the Activity of Acetyl Coenzyme A Synthetase in Campylobacter jejuni.	Jeter VL, Escalante-Semerena JC.	J Bacteriol	10.1128/jb.00333-21	2021
	Spectral diffusion of the lowest exciton component in the core complex from Rhodopseudomonas palustris studied by single-molecule spectroscopy.	Richter MF, Baier J, Southall J, Cogdell RJ, Oellerich S, Kohler J.	Photosynth Res	10.1007/s11120-007-9267-9	2008
Metabolism	Functional analysis of multiple nifB genes of Paenibacillus strains in synthesis of Mo-, Fe- and V-nitrogenases.	Li Q, Zhang H, Zhang L, Chen S.	Microb Cell Fact	10.1186/s12934-021-01629-9	2021
Metabolism	Extracellular 5-aminolevulinic acid production by Escherichia coli containing the Rhodopseudomonas palustris KUGB306 hemA gene.	Choi HP, Lee YM, Yun CW, Sung HC.	J Microbiol Biotechnol		2008
Metabolism	Biodecolorization and partial mineralization of Reactive Black 5 by a strain of Rhodopseudomonas palustris.	Wang X, Cheng X, Sun D, Qi H.	J Environ Sci (China)	10.1016/s1001-0742(08)62212-3	2008
Genetics	Geochemical and metagenomics study of a metal-rich, green-turquoise-coloured stream in the southern Swiss Alps.	Buetti-Dinh A, Ruinelli M, Czerski D, Scapozza C, Martignier A, Roman S, Caminada A, Tonolla M.	PLoS One	10.1371/journal.pone.0248877	2021
Metabolism	Discerning the role of a functional arsenic-resistance cassette in the evolution and adaptation of a rice pathogen.	Kaur A, Rana R, Saroha T, Patil PB.	Microb Genom	10.1099/mgen.0.000608	2021
Metabolism	Chemoenzymatic Synthesis and Biological Evaluation for Bioactive Molecules Derived from Bacterial Benzoyl Coenzyme A Ligase and Plant Type III Polyketide Synthase.	Adhikari K, Lo IW, Chen CL, Wang YL, Lin KH, Zadeh SM, Rattinam R, Li YS, Wu CJ, Li TL.	Biomolecules	10.3390/biom10050738	2020
	Inducible cell-to-cell signaling for tunable dynamics in microbial communities.	Miano A, Liao MJ, Hasty J.	Nat Commun	10.1038/s41467-020-15056-8	2020
	Use of wood vinegar to enhance 5-aminolevulinic acid production by selected Rhodopseudomonas palustris in rubber sheet wastewater for agricultural use.	Nunkaew T, Kantachote D, Chaiprapat S, Nitoda T, Kanzaki H.	Saudi J Biol Sci	10.1016/j.sjbs.2016.01.028	2018
	Characterisation of a pucBA deletion mutant from Rhodopseudomonas palustris lacking all but the pucBA_d genes.	Southall J, Henry SL, Gardiner AT, Roszak AW, Mullen W, Carey AM, Kelly SM, de Percin Northumberland CO, Cogdell RJ.	Photosynth Res	10.1007/s11120-017-0386-7	2018
	A far-red light-inducible CRISPR-Cas12a platform for remote-controlled genome editing and gene activation.	Wang X, Dong K, Kong D, Zhou Y, Yin J, Cai F, Wang M, Ye H.	Sci Adv	10.1126/sciadv.abh2358	2021
Metabolism	Refactoring of a synthetic raspberry ketone pathway with EcoFlex.	Moore SJ, Hleba YB, Bischoff S, Bell D, Polizzi KM, Freemont PS.	Microb Cell Fact	10.1186/s12934-021-01604-4	2021
Enzymology	Improving squalene production by enhancing the NADPH/NADP⁺ ratio, modifying the isoprenoid-feeding module and blocking the menaquinone pathway in Escherichia coli.	Xu W, Yao J, Liu L, Ma X, Li W, Sun X, Wang Y.	Biotechnol Biofuels	10.1186/s13068-019-1415-x	2019
	Comparative study on hypocholesterolemic effect of Rhodopseudomonas palustris and Rhodobacter capsulatus on rats fed a high cholesterol diet	TSUJII H, NISHIOKA M, SALMA U, MIAH AG, MAKI T, LEE MG.	Anim Sci J	10.1111/j.1740-0929.2007.00473.x	2007
	Soil application of effective microorganisms and nitrogen alleviates salt stress in hot pepper (Capsicum annum L.) plants.	Abdelkhalik A, Abd El-Mageed TA, Mohamed IAA, Semida WM, Al-Elwany OAAI, Ibrahim IM, Hemida KA, El-Saadony MT, AbuQamar SF, El-Tarabily KA, Gyushi MAH.	Front Plant Sci	10.3389/fpls.2022.1079260	2022
Metabolism	CYP201A2, a cytochrome P450 from Rhodopseudomonas palustris, plays a key role in the biodegradation of tributyl phosphate.	Berne C, Pignol D, Lavergne J, Garcia D.	Appl Microbiol Biotechnol	10.1007/s00253-007-1140-4	2007
	Efficient Green Light Acclimation of the Green Algae Picochlorum sp. Triggering Geranylgeranylated Chlorophylls.	Paper M, Glemser M, Haack M, Lorenzen J, Mehlmer N, Fuchs T, Schenk G, Garbe D, Weuster-Botz D, Eisenreich W, Lakatos M, Bruck TB.	Front Bioeng Biotechnol	10.3389/fbioe.2022.885977	2022
Metabolism	Characterization of anaerobic catabolism of p-coumarate in Rhodopseudomonas palustris by integrating transcriptomics and quantitative proteomics.	Pan C, Oda Y, Lankford PK, Zhang B, Samatova NF, Pelletier DA, Harwood CS, Hettich RL.	Mol Cell Proteomics	10.1074/mcp.m700147-mcp200	2008
	An in vivo imaging-based assay for detecting protein interactions over a wide range of binding affinities.	Edwards AN, Fowlkes JD, Owens ET, Standaert RF, Pelletier DA, Hurst GB, Doktycz MJ, Morrell-Falvey JL.	Anal Biochem	10.1016/j.ab.2009.08.015	2009
Metabolism	An Insight of RuBisCO Evolution through a Multilevel Approach.	Camel V, Zolla G.	Biomolecules	10.3390/biom11121761	2021
	Photosynthetic bacterium Rhodopseudomonas palustris GJ-22 induces systemic resistance against viruses.	Su P, Tan X, Li C, Zhang D, Cheng J, Zhang S, Zhou X, Yan Q, Peng J, Zhang Z, Liu Y, Lu X.	Microb Biotechnol	10.1111/1751-7915.12704	2017
Metabolism	Crystal structure of CYP199A2, a para-substituted benzoic acid oxidizing cytochrome P450 from Rhodopseudomonas palustris.	Bell SG, Xu F, Forward I, Bartlam M, Rao Z, Wong LL.	J Mol Biol	10.1016/j.jmb.2008.08.033	2008
Metabolism	[Distribution of bacteriochlorophyll between the pigment-protein complexes of the sulfur photosynthesizing bacterium Allochromatium minutissimum depending on light intensity at different temperatures].	Solov'ev AA, Erokhin IuE.	Mikrobiologiia	10.1134/s0026261708050044	2008
	[Selective distribution and physiological function of heterogeneous carotenoids in purple photosynthetic bacterium Rhodopseudomonas palustris].	Feng J, Li XF, Liu Y.	Guang Pu Xue Yu Guang Pu Fen Xi		2008
Enzymology	Substrate Profiling of the Cobalt Nitrile Hydratase from Rhodococcus rhodochrous ATCC BAA 870.	Mashweu AR, Chhiba-Govindjee VP, Bode ML, Brady D.	Molecules	10.3390/molecules25010238	2020
Metabolism	Dual role for a bacteriophytochrome in the bioenergetic control of Rhodopseudomonas palustris: enhancement of photosystem synthesis and limitation of respiration.	Kojadinovic M, Laugraud A, Vuillet L, Fardoux J, Hannibal L, Adriano JM, Bouyer P, Giraud E, Vermeglio A.	Biochim Biophys Acta	10.1016/j.bbabio.2007.09.003	2008
	Agavin induces beneficial microbes in the shrimp microbiota under farming conditions.	Ochoa-Romo JP, Cornejo-Granados F, Lopez-Zavala AA, Viana MT, Sanchez F, Gallardo-Becerra L, Luque-Villegas M, Valdez-Lopez Y, Sotelo-Mundo RR, Cota-Huizar A, Lopez-Munguia A, Ochoa-Leyva A.	Sci Rep	10.1038/s41598-022-10442-2	2022
Phylogeny	Niche Differentiation of Arsenic-Transforming Microbial Groups in the Rice Rhizosphere Compartments as Impacted by Water Management and Soil-Arsenic Concentrations.	Somenahally AC, Loeppert RH, Zhou J, Gentry TJ.	Front Microbiol	10.3389/fmicb.2021.736751	2021
	Directed evolution of ribosomal protein S1 for enhanced translational efficiency of high GC Rhodopseudomonas palustris DNA in Escherichia coli.	Bernstein JR, Bulter T, Shen CR, Liao JC.	J Biol Chem	10.1074/jbc.m701395200	2007
	Zinc-biochemical co-fertilization improves rice performance and reduces nutrient surplus under semi-arid environmental conditions.	El-Sobky EEA, Taha AE, El-Sharnouby M, Sayed SM, Elrys AS.	Saudi J Biol Sci	10.1016/j.sjbs.2021.10.066	2022
Enzymology	Unfolding pathway and intermolecular interactions of the cytochrome subunit in the bacterial photosynthetic reaction center.	Miller LC, Zhao L, Canniffe DP, Martin D, Liu LN.	Biochim Biophys Acta Bioenerg	10.1016/j.bbabio.2020.148204	2020
	Microbiome involved in anaerobic hydrogen producing granules: A mini review.	Pugazhendhi A, Kumar G, Sivagurunathan P.	Biotechnol Rep (Amst)	10.1016/j.btre.2018.e00301	2019
Metabolism	Composition and localization of bacteriochlorophyll a intermediates in the purple photosynthetic bacterium Rhodopseudomonas sp. Rits.	Harada J, Mizoguchi T, Yoshida S, Isaji M, Oh-Oka H, Tamiaki H.	Photosynth Res	10.1007/s11120-007-9254-1	2008
Metabolism	Hydrogen production by photoreactive nanoporous latex coatings of nongrowing Rhodopseudomonas palustris CGA009.	Gosse JL, Engel BJ, Rey FE, Harwood CS, Scriven LE, Flickinger MC.	Biotechnol Prog	10.1021/bp060254+	2007
	Evaluation of affinity-tagged protein expression strategies using local and global isotope ratio measurements.	Hervey WJ, Khalsa-Moyers G, Lankford PK, Owens ET, McKeown CK, Lu TY, Foote LJ, Asano KG, Morrell-Falvey JL, McDonald WH, Pelletier DA, Hurst GB.	J Proteome Res	10.1021/pr801088f	2009
	Crystallization and preliminary X-ray characterization of the full-length bacteriophytochrome from the plant pathogen Xanthomonas campestris pv. campestris.	Klinke S, Otero LH, Rinaldi J, Sosa S, Guimaraes BG, Shepard WE, Goldbaum FA, Bonomi HR.	Acta Crystallogr F Struct Biol Commun	10.1107/s2053230x14023243	2014
	Bioelectrochemical Fixation of Nitrogen to Extracellular Ammonium by Pseudomonas stutzeri.	Chen S, Jing X, Yan Y, Huang S, Liu X, Chen P, Zhou S.	Appl Environ Microbiol	10.1128/aem.01998-20	2021
Enzymology	Light-activated cytotoxic compounds from Malaysian microorganisms for photodynamic therapy of cancer.	Kamal N, Sabaratnam V, Abdullah N, Ho AS, Teo SH, Lee HB.	Antonie Van Leeuwenhoek	10.1007/s10482-008-9301-8	2009
	Exploring Biodiversity and Arsenic Metabolism of Microbiota Inhabiting Arsenic-Rich Groundwaters in Northern Italy.	Cavalca L, Zecchin S, Zaccheo P, Abbas B, Rotiroti M, Bonomi T, Muyzer G.	Front Microbiol	10.3389/fmicb.2019.01480	2019
	Spectroscopic, thermodynamic and computational evidence of the locations of the FADs in the nitrogen fixation-associated electron transfer flavoprotein.	Mohamed-Raseek N, Duan HD, Hildebrandt P, Mroginski MA, Miller AF.	Chem Sci	10.1039/c9sc00942f	2019
	Serial femtosecond and serial synchrotron crystallography can yield data of equivalent quality: A systematic comparison.	Mehrabi P, Bucker R, Bourenkov G, Ginn HM, von Stetten D, Muller-Werkmeister HM, Kuo A, Morizumi T, Eger BT, Ou WL, Oghbaey S, Sarracini A, Besaw JE, Pare-Labrosse O, Meier S, Schikora H, Tellkamp F, Marx A, Sherrell DA, Axford D, Owen RL, Ernst OP, Pai EF, Schulz EC, Miller RJD.	Sci Adv	10.1126/sciadv.abf1380	2021
	mRhubarb: Engineering of monomeric, red-shifted, and brighter variants of iRFP using structure-guided multi-site mutagenesis.	Rogers OC, Johnson DM, Firnberg E.	Sci Rep	10.1038/s41598-019-52123-7	2019
Metabolism	Bacterial Sirtuins Overview: An Open Niche to Explore.	Gallego-Jara J, Ortega A, Lozano Terol G, Sola Martinez RA, Canovas Diaz M, de Diego Puente T.	Front Microbiol	10.3389/fmicb.2021.744416	2021
	A structural study of cadmium interaction with aquatic microorganisms.	Pokrovsky OS, Pokrovski GS, Feurtet-Mazel A.	Environ Sci Technol	10.1021/es800521a	2008
Genetics	Metagenomic Functional Shifts to Plant Induced Environmental Changes.	Yurgel SN, Nearing JT, Douglas GM, Langille MGI.	Front Microbiol	10.3389/fmicb.2019.01682	2019
Phylogeny	Intrageneric relationships of members of the genus Rhodopseudomonas.	Okamura K, Takata K, Hiraishi A.	J Gen Appl Microbiol	10.2323/jgam.55.469	2009
Enzymology	Arsenic methylation and volatilization by arsenite S-adenosylmethionine methyltransferase in Pseudomonas alcaligenes NBRC14159.	Zhang J, Cao T, Tang Z, Shen Q, Rosen BP, Zhao FJ.	Appl Environ Microbiol	10.1128/aem.03804-14	2015
Metabolism	Dynamic changes of microbial community diversity in a photohydrogen producing reactor monitored by PCR-DGGE.	Ying Y, Lv Z, Min H, Cheng J.	J Environ Sci (China)	10.1016/s1001-0742(08)62158-0	2008
	RNA-Seq Provides New Insights into the Gene Expression Changes in Azoarcus olearius BH72 under Nitrogen-Deficient and Replete Conditions beyond the Nitrogen Fixation Process.	Solaiyappan Mani S, Reinhold-Hurek B.	Microorganisms	10.3390/microorganisms9091888	2021
Metabolism	A comparative look at structural variation among RC-LH1 'Core' complexes present in anoxygenic phototrophic bacteria.	Gardiner AT, Nguyen-Phan TC, Cogdell RJ.	Photosynth Res	10.1007/s11120-020-00758-3	2020
Metabolism	In vitro kinetic studies on the mechanism of oxygen-dependent cellular uptake of copper radiopharmaceuticals.	Holland JP, Giansiracusa JH, Bell SG, Wong LL, Dilworth JR.	Phys Med Biol	10.1088/0031-9155/54/7/017	2009
	A novel homeostatic mechanism tunes PI(4,5)P2-dependent signaling at the plasma membrane.	Wills RC, Doyle CP, Zewe JP, Pacheco J, Hansen SD, Hammond GRV.	J Cell Sci	10.1242/jcs.261494	2023
	Molecular Basis of Bacterial Longevity.	Pechter KB, Yin L, Oda Y, Gallagher L, Yang J, Manoil C, Harwood CS.	mBio	10.1128/mbio.01726-17	2017
Metabolism	Rhodopseudomonas palustris CGA009 has two functional ppsR genes, each of which encodes a repressor of photosynthesis gene expression.	Braatsch S, Bernstein JR, Lessner F, Morgan J, Liao JC, Harwood CS, Beatty JT.	Biochemistry	10.1021/bi061074b	2006
	Atomic force microscopy studies of native photosynthetic membranes.	Sturgis JN, Tucker JD, Olsen JD, Hunter CN, Niederman RA.	Biochemistry	10.1021/bi900045x	2009
Metabolism	Growth characteristics of Rhodopseudomonas palustris cultured outdoors, in an underwater tubular photobioreactor, and investigation on photosynthetic efficiency.	Carlozzi P, Pushparaj B, Degl'Innocenti A, Capperucci A.	Appl Microbiol Biotechnol	10.1007/s00253-006-0550-z	2006
Enzymology	Discovery of novel highly active and stable aspartate dehydrogenases.	Li H, Zhu T, Miao L, Zhang D, Li Y, Li Q, Li Y.	Sci Rep	10.1038/s41598-017-05522-7	2017
	Ferulic acid production by metabolically engineered Escherichia coli.	Lv H, Zhang Y, Shao J, Liu H, Wang Y.	Bioresour Bioprocess	10.1186/s40643-021-00423-0	2021
	Potential of Phototrophic Purple Nonsulfur Bacteria to Fix Nitrogen in Rice Fields.	Maeda I.	Microorganisms	10.3390/microorganisms10010028	2021
Transcriptome	Time-Course Transcriptome of Parageobacillus thermoglucosidasius DSM 6285 Grown in the Presence of Carbon Monoxide and Air.	Aliyu H, Mohr T, Cowan D, de Maayer P, Neumann A.	Int J Mol Sci	10.3390/ijms21113870	2020
	Multiplexed whole-animal imaging with reversibly switchable optoacoustic proteins.	Mishra K, Stankevych M, Fuenzalida-Werner JP, Grassmann S, Gujrati V, Huang Y, Klemm U, Buchholz VR, Ntziachristos V, Stiel AC.	Sci Adv	10.1126/sciadv.aaz6293	2020
Metabolism	Redox Regulation of a Light-Harvesting Antenna Complex in an Anoxygenic Phototroph.	Fixen KR, Oda Y, Harwood CS.	mBio	10.1128/mbio.02838-19	2019
	The Phospholipid N-Methyltransferase and Phosphatidylcholine Synthase Pathways and the ChoXWV Choline Uptake System Involved in Phosphatidylcholine Synthesis Are Widely Conserved in Most, but Not All Brucella Species.	Aragon-Aranda B, Palacios-Chaves L, Salvador-Bescos M, de Miguel MJ, Munoz PM, Vences-Guzman MA, Zuniga-Ripa A, Lazaro-Anton L, Sohlenkamp C, Moriyon I, Iriarte M, Conde-Alvarez R.	Front Microbiol	10.3389/fmicb.2021.614243	2021
Metabolism	A new class of homoserine lactone quorum-sensing signals.	Schaefer AL, Greenberg EP, Oliver CM, Oda Y, Huang JJ, Bittan-Banin G, Peres CM, Schmidt S, Juhaszova K, Sufrin JR, Harwood CS.	Nature	10.1038/nature07088	2008
Metabolism	Bacteriogenic synthesis of selenium nanoparticles by Escherichia coli ATCC 35218 and its structural characterisation.	Kora AJ, Rastogi L.	IET Nanobiotechnol	10.1049/iet-nbt.2016.0011	2017
Metabolism	Mechanisms, Detection, and Relevance of Protein Acetylation in Prokaryotes.	Christensen DG, Baumgartner JT, Xie X, Jew KM, Basisty N, Schilling B, Kuhn ML, Wolfe AJ.	mBio	10.1128/mbio.02708-18	2019
	Development of a Biosensor for Detection of Benzoic Acid Derivatives in Saccharomyces cerevisiae.	Castano-Cerezo S, Fournie M, Urban P, Faulon JL, Truan G.	Front Bioeng Biotechnol	10.3389/fbioe.2019.00372	2019
Genetics	Essential Genome of the Metabolically Versatile Alphaproteobacterium Rhodopseudomonas palustris.	Pechter KB, Gallagher L, Pyles H, Manoil CS, Harwood CS.	J Bacteriol	10.1128/jb.00771-15	2015
Enzymology	Cytochrome P450 enzymes from the metabolically diverse bacterium Rhodopseudomonas palustris.	Bell SG, Hoskins N, Xu F, Caprotti D, Rao Z, Wong LL.	Biochem Biophys Res Commun	10.1016/j.bbrc.2006.01.133	2006
	Structure and Function of Rhizosphere Soil and Root Endophytic Microbial Communities Associated With Root Rot of Panax notoginseng.	Wang P, Yang L, Sun J, Yang Y, Qu Y, Wang C, Liu D, Huang L, Cui X, Liu Y.	Front Plant Sci	10.3389/fpls.2021.752683	2021
Enzymology	Screening and purification for novel cytochrome b5 from uncultured environmental micro-organisms.	Roh C, Villatte F, Kim BG, Schmid RD.	Lett Appl Microbiol	10.1111/j.1472-765x.2007.02118.x	2007
Genetics	The landscape of bacterial presence in tumor and adjacent normal tissue across 9 major cancer types using TCGA exome sequencing.	Rodriguez RM, Hernandez BY, Menor M, Deng Y, Khadka VS.	Comput Struct Biotechnol J	10.1016/j.csbj.2020.03.003	2020
	"Candidatus Chlorobium masyuteum," a Novel Photoferrotrophic Green Sulfur Bacterium Enriched From a Ferruginous Meromictic Lake.	Lambrecht N, Stevenson Z, Sheik CS, Pronschinske MA, Tong H, Swanner ED.	Front Microbiol	10.3389/fmicb.2021.695260	2021
	The photosynthetic apparatus of Rhodopseudomonas palustris: structures and organization.	Scheuring S, Goncalves RP, Prima V, Sturgis JN.	J Mol Biol	10.1016/j.jmb.2006.01.085	2006
	Chromophore binding to two cysteines increases quantum yield of near-infrared fluorescent proteins.	Buhrke D, Tavraz NN, Shcherbakova DM, Sauthof L, Moldenhauer M, Velazquez Escobar F, Verkhusha VV, Hildebrandt P, Friedrich T.	Sci Rep	10.1038/s41598-018-38433-2	2019
	Structural determination of dihydro- and tetrahydrogeranylgeranyl groups at the 17-propionate of bacteriochlorophylls-a.	Mizoguchi T, Harada J, Tamiaki H.	FEBS Lett	10.1016/j.febslet.2006.11.020	2006
Metabolism	Non-native N-aroyl L-homoserine lactones are potent modulators of the quorum sensing receptor RpaR in Rhodopseudomonas palustris.	McInnis CE, Blackwell HE.	Chembiochem	10.1002/cbic.201300570	2014
Metabolism	Tributyl phosphate degradation by Rhodopseudomonas palustris and other photosynthetic bacteria.	Berne C, Allainmat B, Garcia D.	Biotechnol Lett	10.1007/s10529-005-2882-7	2005
	A singular PpaA/AerR-like protein in Rhodospirillum rubrum rules beyond the boundaries of photosynthesis in response to the intracellular redox state.	Godoy MS, de Miguel SR, Prieto MA.	mSystems	10.1128/msystems.00702-23	2023
Genetics	Gut microbiome modulation mediated by probiotics: Positive impact on growth and health status of Labeo rohita.	Ghori I, Tubassam M, Ahmad T, Zuberi A, Imran M.	Front Physiol	10.3389/fphys.2022.949559	2022
	Current production by non-methanotrophic bacteria enriched from an anaerobic methane-oxidizing microbial community.	Berger S, Shaw DR, Berben T, Ouboter HT, In 't Zandt MH, Frank J, Reimann J, Jetten MSM, Welte CU.	Biofilm	10.1016/j.bioflm.2021.100054	2021
Metabolism	Production of Squalene in Bacillus subtilis by Squalene Synthase Screening and Metabolic Engineering.	Song Y, Guan Z, van Merkerk R, Pramastya H, Abdallah II, Setroikromo R, Quax WJ.	J Agric Food Chem	10.1021/acs.jafc.0c00375	2020
	Transfer RNA function and evolution.	O'Donoghue P, Ling J, Soll D.	RNA Biol	10.1080/15476286.2018.1478942	2018
	Evaluation of colors in green mutants isolated from purple bacteria as a host for colorimetric whole-cell biosensors.	Yoshida K, Yoshioka D, Inoue K, Takaichi S, Maeda I.	Appl Microbiol Biotechnol	10.1007/s00253-007-1079-5	2007
Enzymology	Dark States in the Light-Harvesting complex 2 Revealed by Two-dimensional Electronic Spectroscopy.	Ferretti M, Hendrikx R, Romero E, Southall J, Cogdell RJ, Novoderezhkin VI, Scholes GD, van Grondelle R.	Sci Rep	10.1038/srep20834	2016
Metabolism	Comparison of digestion protocols for microgram quantities of enriched protein samples.	Hervey WJ, Strader MB, Hurst GB.	J Proteome Res	10.1021/pr070159b	2007
Metabolism	BadR and BadM Proteins Transcriptionally Regulate Two Operons Needed for Anaerobic Benzoate Degradation by Rhodopseudomonas palustris.	Hirakawa H, Hirakawa Y, Greenberg EP, Harwood CS.	Appl Environ Microbiol	10.1128/aem.00377-15	2015
	Identification of Bradyrhizobium elkanii Genes Involved in Incompatibility with Vigna radiata.	Nguyen HP, Miwa H, Kaneko T, Sato S, Okazaki S.	Genes (Basel)	10.3390/genes8120374	2017
	FTIR Spectroscopy Revealing Light-Dependent Refolding of the Conserved Tongue Region of Bacteriophytochrome.	Stojkovic EA, Toh KC, Alexandre MT, Baclayon M, Moffat K, Kennis JT.	J Phys Chem Lett	10.1021/jz501189t	2014
Metabolism	A far-red cyanobacteriochrome lineage specific for verdins.	Moreno MV, Rockwell NC, Mora M, Fisher AJ, Lagarias JC.	Proc Natl Acad Sci U S A	10.1073/pnas.2016047117	2020
Metabolism	Sensing of autoinducer-2 by functionally distinct receptors in prokaryotes.	Zhang L, Li S, Liu X, Wang Z, Jiang M, Wang R, Xie L, Liu Q, Xie X, Shang D, Li M, Wei Z, Wang Y, Fan C, Luo ZQ, Shen X.	Nat Commun	10.1038/s41467-020-19243-5	2020
Metabolism	2,3-Dihydroxybenzoate meta-Cleavage Pathway is Involved in o-Phthalate Utilization in Pseudomonas sp. strain PTH10.	Kasai D, Iwasaki T, Nagai K, Araki N, Nishi T, Fukuda M.	Sci Rep	10.1038/s41598-018-38077-2	2019
Metabolism	Characterization of pII family (GlnK1, GlnK2, and GlnB) protein uridylylation in response to nitrogen availability for Rhodopseudomonas palustris.	Connelly HM, Pelletier DA, Lu TY, Lankford PK, Hettich RL.	Anal Biochem	10.1016/j.ab.2006.05.038	2006
	Linking Short-Chain N-Acyl Homoserine Lactone-Mediated Quorum Sensing and Replant Disease: A Case Study of Rehmannia glutinosa.	Li Q, Wu Y, Wang J, Yang B, Chen J, Wu H, Zhang Z, Lu C, Lin W, Wu L.	Front Plant Sci	10.3389/fpls.2020.00787	2020
Enzymology	A Hyperthermoactive-Cas9 Editing Tool Reveals the Role of a Unique Arsenite Methyltransferase in the Arsenic Resistance System of Thermus thermophilus HB27.	Gallo G, Mougiakos I, Bianco M, Carbonaro M, Carpentieri A, Illiano A, Pucci P, Bartolucci S, van der Oost J, Fiorentino G.	mBio	10.1128/mbio.02813-21	2021
Metabolism	Experimental and Computational Investigation of Biofilm Formation by Rhodopseudomonas palustris Growth under Two Metabolic Modes.	Kernan C, Chow PP, Christianson RJ, Huang J.	PLoS One	10.1371/journal.pone.0129354	2015
Metabolism	Cross-Feedings, Competition, and Positive and Negative Synergies in a Four-Species Synthetic Community for Anaerobic Degradation of Cellulose to Methane.	Wang D, Hunt KA, Candry P, Tao X, Wofford NQ, Zhou J, McInerney MJ, Stahl DA, Tanner RS, Zhou A, Winkler M, Pan C.	mBio	10.1128/mbio.03189-22	2023
Enzymology	Distinct properties underlie flavin-based electron bifurcation in a novel electron transfer flavoprotein FixAB from Rhodopseudomonas palustris.	Duan HD, Lubner CE, Tokmina-Lukaszewska M, Gauss GH, Bothner B, King PW, Peters JW, Miller AF.	J Biol Chem	10.1074/jbc.ra117.000707	2018
	Genetic Engineering Approaches for the Microbial Production of Vanillin.	Santos LDF, Lautru S, Pernodet JL.	Biomolecules	10.3390/biom14111413	2024
	Statistically inferring protein-protein associations with affinity isolation LC-MS/MS assays.	Sharp JL, Anderson KK, Hurst GB, Daly DS, Pelletier DA, Cannon WR, Auberry DL, Schmoyer DD, McDonald WH, White AM, Hooker BS, Victry KD, Buchanan MV, Kery V, Wiley HS.	J Proteome Res	10.1021/pr0701106	2007
	Platinum-free, graphene based anodes and air cathodes for single chamber microbial fuel cells.	Call TP, Carey T, Bombelli P, Lea-Smith DJ, Hooper P, Howe CJ, Torrisi F.	J Mater Chem A Mater	10.1039/c7ta06895f	2017
Enzymology	Structures of two bacterial prolyl-tRNA synthetases with and without a cis-editing domain.	Crepin T, Yaremchuk A, Tukalo M, Cusack S.	Structure	10.1016/j.str.2006.08.007	2006
	The essential Rhodobacter sphaeroides CenKR two-component system regulates cell division and envelope biosynthesis.	Lakey BD, Myers KS, Alberge F, Mettert EL, Kiley PJ, Noguera DR, Donohue TJ.	PLoS Genet	10.1371/journal.pgen.1010270	2022
	Identification of essential beta-oxidation genes and corresponding metabolites for oestrogen degradation by actinobacteria.	Hsiao TH, Lee TH, Chuang MR, Wang PH, Meng M, Horinouchi M, Hayashi T, Chen YL, Chiang YR.	Microb Biotechnol	10.1111/1751-7915.13921	2022
	Comparative Metagenomics Reveals Microbial Signatures of Sugarcane Phyllosphere in Organic Management.	Khoiri AN, Cheevadhanarak S, Jirakkakul J, Dulsawat S, Prommeenate P, Tachaleat A, Kusonmano K, Wattanachaisaereekul S, Sutheeworapong S.	Front Microbiol	10.3389/fmicb.2021.623799	2021
Enzymology	6-Oxocyclohex-1-ene-1-carbonyl-coenzyme A hydrolases from obligately anaerobic bacteria: characterization and identification of its gene as a functional marker for aromatic compounds degrading anaerobes.	Kuntze K, Shinoda Y, Moutakki H, McInerney MJ, Vogt C, Richnow HH, Boll M.	Environ Microbiol	10.1111/j.1462-2920.2008.01570.x	2008
	Accelerating microbial iron cycling promotes re-cementation of surface crusts in iron ore regions.	Gagen EJ, Levett A, Paz A, Bostelmann H, Valadares RBDS, Bitencourt JAP, Gastauer M, Nunes GL, Oliveira G, Vasconcelos PM, Tyson GW, Southam G.	Microb Biotechnol	10.1111/1751-7915.13646	2020
Metabolism	Sulfoacetate generated by Rhodopseudomonas palustris from taurine.	Denger K, Weinitschke S, Hollemeyer K, Cook AM.	Arch Microbiol	10.1007/s00203-004-0678-0	2004
	Physicochemical Approach to Understanding the Structure, Conformation, and Activity of Mannan Polysaccharides.	Casillo A, Fabozzi A, Russo Krauss I, Parrilli E, Biggs CI, Gibson MI, Lanzetta R, Appavou MS, Radulescu A, Tutino ML, Paduano L, Corsaro MM.	Biomacromolecules	10.1021/acs.biomac.0c01659	2021
Phylogeny	No Tangible Effects of Field-Grown Cisgenic Potatoes on Soil Microbial Communities.	Krause SMB, Nather A, Ortiz Cortes V, Mullins E, Kessel GJT, Lotz LAP, Tebbe CC.	Front Bioeng Biotechnol	10.3389/fbioe.2020.603145	2020
	Stimulation of Nicotiana tabacum L. In Vitro Shoot Growth by Endophytic Bacillus cereus Group Bacteria.	Andriunaite E, Tamosiune I, Aleksandraviciute M, Gelvonauskiene D, Vinskiene J, Rugienius R, Baniulis D.	Microorganisms	10.3390/microorganisms9091893	2021
Metabolism	Use of the Rhodopseudomonas palustris genome sequence to identify a single amino acid that contributes to the activity of a coenzyme A ligase with chlorinated substrates.	Samanta SK, Harwood CS.	Mol Microbiol	10.1111/j.1365-2958.2004.04452.x	2005
	In Vivo Follow-up of Brain Tumor Growth via Bioluminescence Imaging and Fluorescence Tomography.	Genevois C, Loiseau H, Couillaud F.	Int J Mol Sci	10.3390/ijms17111815	2016
Enzymology	[Isolation and identification of a photosynthetic bacteria producing coenzyme Q10].	Fang LC, Huang XF, Du ZH, Yuan J, Wei H, Cheng HH, Liu Y.	Wei Sheng Wu Xue Bao		2005
	Evolution of KaiC-Dependent Timekeepers: A Proto-circadian Timing Mechanism Confers Adaptive Fitness in the Purple Bacterium Rhodopseudomonas palustris.	Ma P, Mori T, Zhao C, Thiel T, Johnson CH.	PLoS Genet	10.1371/journal.pgen.1005922	2016
Genetics	Identification of Arsenic Resistance Genes from Marine Sediment Metagenome.	Chauhan NS, Nain S, Sharma R.	Indian J Microbiol	10.1007/s12088-017-0658-0	2017
Metabolism	A bacteriophytochrome regulates the synthesis of LH4 complexes in Rhodopseudomonas palustris.	Evans K, Fordham-Skelton AP, Mistry H, Reynolds CD, Lawless AM, Papiz MZ.	Photosynth Res	10.1007/s11120-005-1369-7	2005
Biotechnology	Eco-Friendly Greener Synthesis of Nanoparticles.	Bhardwaj B, Singh P, Kumar A, Kumar S, Budhwar V.	Adv Pharm Bull	10.34172/apb.2020.067	2020
	Escherichia coli Has a Unique Transcriptional Program in Long-Term Stationary Phase Allowing Identification of Genes Important for Survival.	Kram KE, Henderson AL, Finkel SE.	mSystems	10.1128/msystems.00364-20	2020
Metabolism	The acetylation motif in AMP-forming Acyl coenzyme A synthetases contains residues critical for acetylation and recognition by the protein acetyltransferase pat of Rhodopseudomonas palustris.	Crosby HA, Escalante-Semerena JC.	J Bacteriol	10.1128/jb.00004-14	2014
Metabolism	Determination and comparison of the baseline proteomes of the versatile microbe Rhodopseudomonas palustris under its major metabolic states.	VerBerkmoes NC, Shah MB, Lankford PK, Pelletier DA, Strader MB, Tabb DL, McDonald WH, Barton JW, Hurst GB, Hauser L, Davison BH, Beatty JT, Harwood CS, Tabita FR, Hettich RL, Larimer FW.	J Proteome Res	10.1021/pr0503230	2006
Metabolism	Optimization of wastewater feeding for single-cell protein production in an anaerobic wastewater treatment process utilizing purple non-sulfur bacteria in mixed culture condition.	Honda R, Fukushi K, Yamamoto K.	J Biotechnol	10.1016/j.jbiotec.2006.03.022	2006
	Potential for the anaerobic oxidation of benzene and naphthalene in thermophilic microorganisms from the Guaymas Basin.	Zehnle H, Otersen C, Benito Merino D, Wegener G.	Front Microbiol	10.3389/fmicb.2023.1279865	2023
	Dual adhesive unipolar polysaccharides synthesized by overlapping biosynthetic pathways in Agrobacterium tumefaciens.	Onyeziri MC, Hardy GG, Natarajan R, Xu J, Reynolds IP, Kim J, Merritt PM, Danhorn T, Hibbing ME, Weisberg AJ, Chang JH, Fuqua C.	Mol Microbiol	10.1111/mmi.14887	2022
	Molecular replacement using structure predictions from databases.	Simpkin AJ, Thomas JMH, Simkovic F, Keegan RM, Rigden DJ.	Acta Crystallogr D Struct Biol	10.1107/s2059798319013962	2019
	Odorous swine wastewater treatment by purple non-sulfur bacteria, Rhodopseudomonas palustris, isolated from eutrophicated ponds	Kim Mg, Choi KM, Yin CR, Lee KY, Im WT, Lim JH, Lee ST.	Biotechnol Lett.		2004
Genetics	Insights into plastic biodegradation: community composition and functional capabilities of the superworm (Zophobas morio) microbiome in styrofoam feeding trials.	Sun J, Prabhu A, Aroney STN, Rinke C.	Microb Genom	10.1099/mgen.0.000842	2022
	Helical Propensity Affects the Conformational Properties of the Denatured State of Cytochrome c'.	Danielson TA, Bowler BE.	Biophys J	10.1016/j.bpj.2017.11.3744	2018
Metabolism	Promoting effects of a single Rhodopseudomonas palustris inoculant on plant growth by Brassica rapa chinensis under low fertilizer input.	Wong WT, Tseng CH, Hsu SH, Lur HS, Mo CW, Huang CN, Hsu SC, Lee KT, Liu CT.	Microbes Environ	10.1264/jsme2.me14056	2014
	A new type of bacteriophytochrome acts in tandem with a classical bacteriophytochrome to control the antennae synthesis in Rhodopseudomonas palustris.	Giraud E, Zappa S, Vuillet L, Adriano JM, Hannibal L, Fardoux J, Berthomieu C, Bouyer P, Pignol D, Vermeglio A.	J Biol Chem	10.1074/jbc.m506890200	2005
Metabolism	Nitrite-Oxidizing Bacterium Nitrobacter winogradskyi Produces N-Acyl-Homoserine Lactone Autoinducers.	Mellbye BL, Bottomley PJ, Sayavedra-Soto LA.	Appl Environ Microbiol	10.1128/aem.01103-15	2015
Metabolism	Barriers to 3-Hydroxypropionate-Dependent Growth of Rhodobacter sphaeroides by Distinct Disruptions of the Ethylmalonyl Coenzyme A Pathway.	Carlson SJ, Fleig A, Baron MK, Berg IA, Alber BE.	J Bacteriol	10.1128/jb.00556-18	2019
Enzymology	Simultaneous reduction and alkylation of protein disulfides in a centrifugal ultrafiltration device prior to two-dimensional gel electrophoresis.	Smejkal GB, Li C, Robinson MH, Lazarev AV, Lawrence NP, Chernokalskaya E.	J Proteome Res	10.1021/pr050439w	2006
Metabolism	Metabolic pathways to sustainability: review of purple non-sulfur bacteria potential in agri-food waste valorization.	Bayon-Vicente G, Toubeau L, Gilson M, Gego G, Landgey N, Krings S, Leroy B.	Front Bioeng Biotechnol	10.3389/fbioe.2025.1529032	2025
Metabolism	Odorous swine wastewater treatment by purple non-sulfur bacteria, Rhodopseudomonas palustris, isolated from eutrophicated ponds.	Kim MK, Choi KM, Yin CR, Lee KY, Im WT, Lim JH, Lee ST.	Biotechnol Lett	10.1023/b:bile.0000025884.50198.67	2004
Metabolism	Mapping of the benzoate metabolism by human gut microbiome indicates food-derived metagenome evolution.	Yadav M, Lomash A, Kapoor S, Pandey R, Chauhan NS.	Sci Rep	10.1038/s41598-021-84964-6	2021
Metabolism	Volatilization of arsenic from polluted soil by Pseudomonas putida engineered for expression of the arsM Arsenic(III) S-adenosine methyltransferase gene.	Chen J, Sun GX, Wang XX, Lorenzo Vd, Rosen BP, Zhu YG.	Environ Sci Technol	10.1021/es502230b	2014
Metabolism	Community structures and activities of nitrifying and denitrifying bacteria in industrial wastewater-treating biofilms.	Satoh H, Yamakawa T, Kindaichi T, Ito T, Okabe S.	Biotechnol Bioeng	10.1002/bit.20894	2006
Metabolism	Cu Transport by the Extended Family of CcoA-like Transporters (CalT) in Proteobacteria.	Zhang Y, Blaby-Haas CE, Steimle S, Verissimo AF, Garcia-Angulo VA, Koch HG, Daldal F, Khalfaoui-Hassani B.	Sci Rep	10.1038/s41598-018-37988-4	2019
Enzymology	Production of lipases by four anoxygenic purple non-sulphur phototrophic bacteria.	Munjam S, Girisham S, Reddy SM.	Hindustan Antibiot Bull		2005
Enzymology	Acetylation of Lactate Dehydrogenase Negatively Regulates the Acidogenicity of Streptococcus mutans.	Ma Q, Pan Y, Chen Y, Yu S, Huang J, Liu Y, Gong T, Zhang Q, Sun Q, Zou J, Li Y.	mBio	10.1128/mbio.02013-22	2022
Metabolism	The pimFABCDE operon from Rhodopseudomonas palustris mediates dicarboxylic acid degradation and participates in anaerobic benzoate degradation.	Harrison FH, Harwood CS.	Microbiology (Reading)	10.1099/mic.0.27731-0	2005
Metabolism	Anaerobic and aerobic metabolism of diverse aromatic compounds by the photosynthetic bacterium Rhodopseudomonas palustris.	Harwood CS, Gibson J.	Appl Environ Microbiol	10.1128/aem.54.3.712-717.1988	1988
Metabolism	Induction of a thiosulfate-oxidizing enzyme in Rhodopseudomonas palustris.	Rolls JP, Lindstrom ES.	J Bacteriol	10.1128/jb.94.3.784-785.1967	1967
Pathogenicity	Effect of thiosulfate on the photosynthetic growth of Rhodopseudomonas palustris.	Rolls JP, Lindstrom ES.	J Bacteriol	10.1128/jb.94.4.860-866.1967	1967
Metabolism	Enzymatic basis for assimilatory and dissimilatory sulfate reduction.	PECK HD.	J Bacteriol	10.1128/jb.82.6.933-939.1961	1961
Metabolism	Enhanced carotenoid production by Rhodopseudomonas palustris ATCC 17001 under low light conditions.	Lopez-Romero J, Salgado-Manjarrez E, Torres L, Garcia-Pena EI	J Biotechnol	10.1016/j.jbiotec.2020.08.007	2020
Phylogeny	Genomic and genetic sequence information of strains assigned to the genus Rhodopseudomonas reveal the great heterogeneity of the group and identify strain Rhodopseudomonas palustris DSM 123(T) as the authentic type strain of this species.	Imhoff JF, Meyer TE, Kyndt J	Int J Syst Evol Microbiol	10.1099/ijsem.0.004077	2020
	The light intensity under which cells are grown controls the type of peripheral light-harvesting complexes that are assembled in a purple photosynthetic bacterium.	Brotosudarmo TH, Collins AM, Gall A, Roszak AW, Gardiner AT, Blankenship RE, Cogdell RJ	Biochem J	10.1042/BJ20110575	2011
	Single-molecule spectroscopy reveals that individual low-light LH2 complexes from Rhodopseudomonas palustris 2.1.6. have a heterogeneous polypeptide composition.	Brotosudarmo TH, Kunz R, Bohm P, Gardiner AT, Moulisova V, Cogdell RJ, Kohler J	Biophys J	10.1016/j.bpj.2009.06.034	2009
Metabolism	Spectroscopic characterization of nitrosylheme in nitric oxide complexes of ferric and ferrous cytochrome c' from photosynthetic bacteria.	Yoshimura T, Fujii S, Kamada H, Yamaguchi K, Suzuki S, Shidara S, Takakuwa S	Biochim Biophys Acta	10.1016/0167-4838(95)00187-5	1996
Enzymology	Electron paramagnetic resonance studies of ferric cytochrome c' from photosynthetic bacteria.	Fujii S, Yoshimura T, Kamada H, Yamaguchi K, Suzuki S, Shidara S, Takakuwa S	Biochim Biophys Acta	10.1016/0167-4838(95)00092-9	1995
Metabolism	[Fermentation of pyruvate by 7 species of phototrophic purple bacteria].	Gurgun V, Kirchner G, Pfennig N	Z Allg Mikrobiol	10.1002/jobm.3630160802	1976
Enzymology	Energy-linked pyridine nucleotide transhydrogenase activity in photosynthetically grown Rhodopseudomonas palustris.	Knobloch K	Z Naturforsch C Biosci	10.1515/znc-1975-11-1213	1975
	Analysis of the Genomes and Adaptive Traits of Skermanella cutis sp. nov., a Human Skin Isolate, and the Type Strains Skermanella rosea and Skermanella mucosa.	Choi Y, Ganzorig M, Lee K.	Microorganisms	10.3390/microorganisms13010094	2025
Genetics	Genomic and Phylogenetic Characterization of Rhodopseudomonas infernalis sp. nov., Isolated from the Hell Creek Watershed (Nebraska).	Humphrey CE, Burnett N, Dubey S, Kyndt JA.	Microorganisms	10.3390/microorganisms10102024	2022
Phylogeny	Rhodopseudomonas telluris sp. nov., a phototrophic alphaproteobacterium isolated from paddy soil.	Hiraishi A, Okamura K	Int J Syst Evol Microbiol	10.1099/ijsem.0.002120	2017
Phylogeny	Descriptions of Rhodopseudomonas parapalustris sp. nov., Rhodopseudomonas harwoodiae sp. nov. and Rhodopseudomonas pseudopalustris sp. nov., and emended description of Rhodopseudomonas palustris.	Ramana VV, Chakravarthy SK, Raj PS, Kumar BV, Shobha E, Ramaprasad EVV, Sasikala C, Ramana CV	Int J Syst Evol Microbiol	10.1099/ijs.0.026815-0	2011

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#68382	Automatically annotated from API zym .
#121519	Collection of Institut Pasteur ; Curators of the CIP; CIP 103513
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Rhodopseudomonas palustris (ATCC 17001, Pa16, BCRC 16408)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Halophily

Metabolite utilization

Metabolite production

Enzymes

API zym

API biotype100

Isolation, sampling and environmental information

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Risk assessment

Sequence information

16S sequences

Genome-based predictions

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