Name: Thermoanaerobacter mathranii A3
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 16842

Type strain:

Species: Thermoanaerobacter mathranii

Strain Designation: A3

Culture col. no.: DSM 11426, CIP 108742, CCUG 53645, AIP 130.05

Strain history: <- B. K. Ahring, Technical University of Denmark, Department of Environmental Science and Engineering, Lyngby, Denmark; A3 <- J. Sonne-Hansen {1991}

NCBI tax ID(s): 583358 (strain), 583357 (species)

SI-ID 49109

DSM 11426, CIP 108742, CCUG 53645

Section

Thermoanaerobacter mathranii A3 is an anaerobe, thermophilic bacterium that was isolated from sediment of hot spring.

anaerobe
thermophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Clostridia*
	Order	*Thermoanaerobacterales*
	Family	*Thermoanaerobacteraceae*
	Genus	*Thermoanaerobacter*
	Species	**Thermoanaerobacter mathranii**
	Full Scientific Name (LPSN)	Thermoanaerobacter mathranii Larsen et al. 1998

Information on culture and growth conditions Culture and growth conditions

[Ref.: #4359]

Culture medium

CALDICELLULOSIRUPTOR MEDIUM (DSMZ Medium 640)

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Culture medium growth

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Culture medium link

Medium recipe at MediaDive

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Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #4359]			growth	70 °C

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Temperature range

thermophilic

Information on physiology and metabolism Physiology and metabolism

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Oxygen tolerance

anaerobe

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #4359]	Sample type/isolated from	sediment of hot spring
[Ref.: #4359]	Geographic location (country and/or sea, region)	Hverdagerdi-Hengil area
[Ref.: #4359]	Country	Iceland
[Ref.: #4359]	Country ISO 3 Code	ISL
[Ref.: #4359]	Continent	Europe

[Ref.: #59960]	Sample type/isolated from	Hot spring
[Ref.: #59960]	Geographic location (country and/or sea, region)	Hverdagerdi-Hengil area
[Ref.: #59960]	Country	Iceland
[Ref.: #59960]	Country ISO 3 Code	ISL
[Ref.: #59960]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Thermal spring
#Condition	#Thermophilic (>45°C)	-
#Environmental	#Aquatic	#Sediment

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

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Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #4359]	T.mathranii 16S rRNA gene	Y11279	1507	ENA	583358 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Thermoanaerobacter mathranii subsp. mathranii str. A3	GCA_000092965	complete	GenBank	583358 tax ID	*
[Ref.: #66792]	Thermoanaerobacter mathranii subsp. mathranii str. A3	583358.4	complete	PATRIC	583358 tax ID	*
[Ref.: #66792]	Thermoanaerobacter mathranii mathranii A3, DSM 11426	646564580	complete	JGI IMG/M	583358 tax ID	*

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GC-content

37 mol%

high performance liquid chromatography (HPLC)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Thermoanaerobacter mathranii subsp. mathranii str. A3 A3 NCBI: GCA_000092965.1
[Ref.: #69480]	motile	yes	86.004	no
[Ref.: #69480]	flagellated	no	85.833	no
[Ref.: #69480]	gram-positive	no	68.932	no
[Ref.: #69480]	anaerobic	yes	99.546	yes
[Ref.: #69480]	aerobic	no	98.954	no
[Ref.: #69480]	halophile	no	96.045	no
[Ref.: #69480]	spore-forming	yes	91.365	no
[Ref.: #69480]	thermophile	yes	100	yes
[Ref.: #69480]	glucose-util	yes	90.145	no
[Ref.: #69480]	glucose-ferment	yes	57.607	no

Availability in culture collections External links

[Ref.: #4359]

Culture collection no.

DSM 11426, CIP 108742, CCUG 53645, AIP 130.05

[Ref.: #85852]

SI-ID 49109

Literature:

Topic	Title	Authors	Journal	DOI	Year
Biotechnology	Single-step ethanol production from lignocellulose using novel extremely thermophilic bacteria.	Svetlitchnyi VA, Kensch O, Falkenhan DA, Korseska SG, Lippert N, Prinz M, Sassi J, Schickor A, Curvers S	Biotechnol Biofuels	10.1186/1754-6834-6-31	2013	*

References

#4359

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 11426

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#59960 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 53645

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#85852

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID49109.1 )

* These data were automatically processed and therefore are not curated

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Thermoanaerobacter mathranii subsp. mathranii str. A3 A3

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