Thermoanaerobacter wiegelii (DSM 10319, Rt8.B1)

Name: Thermoanaerobacter wiegelii (DSM 10319, Rt8.B1)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 16841

Type strain

Strain Designation Rt8.B1

Culture col. no. DSM 10319 Rt8.B1

NCBI tax ID(s) 46354

Special Collections DSMZ

History <- H. Morgan, Thermophile Res. Unit, Univ. Waikato, Hamilton, New Zealand; Rt8.B1 <- B. K. Patel; {1981}

Links

Thermoanaerobacter wiegelii Rt8.B1 is an anaerobe bacterium that was isolated from freshwater pool, geothermal heat exchanger.

anaerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 48812

BCRC 80218,DSM 10319

@ref 20215

Last LPSN update 2026-02-09 11:22:04

Domain Bacteria

Phylum Bacillota

Class Clostridia

Order Thermoanaerobacterales

Family Thermoanaerobacteraceae

Genus Thermoanaerobacter

Species Thermoanaerobacter wiegelii

Full scientific name Thermoanaerobacter wiegelii Cook et al. 1996

Morphology

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
3904	CALDICELLULOSIRUPTOR MEDIUM (DSMZ Medium 640)		Medium recipe at MediaDive	Name: CALDICELLULOSIRUPTOR MEDIUM (DSMZ Medium 640; with strain-specific modifications) Composition: D-Glucose 5.0 g/l Trypticase peptone 2.0 g/l K2HPO4 1.5 g/l Yeast extract 1.0 g/l NH4Cl 0.9 g/l NaCl 0.9 g/l KH2PO4 0.75 g/l L-Cysteine HCl x H2O 0.75 g/l MgCl2 x 6 H2O 0.4 g/l HCl 0.0025 g/l FeCl3 x 6 H2O 0.0025 g/l FeCl2 x 4 H2O 0.0015 g/l Sodium resazurin 0.0005 g/l CoCl2 x 6 H2O 0.00019 g/l MnCl2 x 4 H2O 0.0001 g/l ZnCl2 7e-05 g/l Na2MoO4 x 2 H2O 3.6e-05 g/l NiCl2 x 6 H2O 2.4e-05 g/l H3BO3 6e-06 g/l CuCl2 x 2 H2O 2e-06 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
3904	positive	growth	65

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
3904	anaerobe
125438	anaerobe	92.845
125439	anaerobe	99.7

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Engineered	#Built environment	#Water reservoir (Aquarium/pool)
#Environmental	#Aquatic	#Freshwater

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
3904	freshwater pool, geothermal heat exchanger	Rotorua	New Zealand	NZL	Australia and Oceania

Taxonmaps

69479

Global distribution of 16S sequence X92513 (>99% sequence identity) for Thermoanaerobacter wiegelii from Microbeatlas

Aquatic Samples	27
Soil Samples	3
Animal Samples	4
Plant Samples
Total Samples	34

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
3904	1	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM14769v3 assembly for Thermoanaerobacter wiegelii Rt8.B1	complete	GCA_000147695	697303.4	2504756058	697303	97.11

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
3904	T.wiegelii 16S rRNA gene	X92513	1464		697303

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Thermoanaerobacter wiegelii Rt8.B1
IMG: 2504756058

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	yes	75.50	no
125439	motility	BacteriaNetⓘ	yes	75.30	no
125439	gram_stain	BacteriaNetⓘ	variable	80.60	no
125439	oxygen_tolerance	BacteriaNetⓘ	anaerobe	99.70	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Thermoanaerobacter wiegelii Rt8.B1 Rt8.B1
NCBI: GCA_000147695.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	55.43	no
125438	anaerobic	anaerobicⓘ	yes	92.85	yes
125438	aerobic	aerobicⓘ	no	93.99	no
125438	spore-forming	spore-formingⓘ	yes	74.61	no
125438	thermophilic	thermophileⓘ	yes	78.57	no
125438	flagellated	motile2+ⓘ	yes	76.65	no

Literature

Topic	Title	Authors	Journal	DOI	Year
	Fermentation of Mannitol Extracts From Brown Macro Algae by Thermophilic Clostridia.	Chades T, Scully SM, Ingvadottir EM, Orlygsson J.	Front Microbiol	10.3389/fmicb.2018.01931	2018
Metabolism	[Characterization of an acidotolerant, thermophilic Thermoanaerobacter sp. xyl-d with a high xylose conversion].	Zhang W, Ma S, Deng Y, Zhang H	Wei Sheng Wu Xue Bao		2011
Phylogeny	Characterization of a new obligately anaerobic thermophile, Thermoanaerobacter wiegelii sp. nov.	Cook GM, Rainey FA, Patel BK, Morgan HW	Int J Syst Bacteriol	10.1099/00207713-46-1-123	1996

References

#3904	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 10319
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Thermoanaerobacter wiegelii (DSM 10319, Rt8.B1)

Name and taxonomic classification

Morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_000147695

16S sequences

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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