Name: Thermoanaerobacter italicus Ab9
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 16837

Type strain:

Species: Thermoanaerobacter italicus

Strain Designation: Ab9

Culture col. no.: DSM 9252, JCM 16815

Strain history: DSM 9252 <-- G. Kozianowski Ab9.

NCBI tax ID(s): 580331 (strain), 108150 (species)

SI-ID 48603

DSM 9252, JCM 16815

Other strains from Thermoanaerobacter italicus

T. italicus Pentocrobe 411, DSM 29083

Section

Thermoanaerobacter italicus Ab9 is an anaerobe, thermophilic bacterium that was isolated from mud, thermal spa.

anaerobe
thermophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Clostridia*
	Order	*Thermoanaerobacterales*
	Family	*Thermoanaerobacteraceae*
	Genus	*Thermoanaerobacter*
	Species	**Thermoanaerobacter italicus**
	Full Scientific Name (LPSN)	Thermoanaerobacter italicus Kozianowski et al. 1998

Information on culture and growth conditions Culture and growth conditions

[Ref.: #3527]

Culture medium

THERMOANAEROBACTER (KOKO) MEDIUM (DSMZ Medium 710)

[Ref.: #3527]

Culture medium growth

[Ref.: #3527]

Culture medium link

Medium recipe at MediaDive

[Ref.: #3527]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #3527]			growth	65 °C
[Ref.: #67770]			growth	65 °C

[Ref.: #3527]	Temperature range	thermophilic
[Ref.: #67770]	Temperature range	thermophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #3527]

Oxygen tolerance

anaerobe

[Ref.: #3527]

Name of produced compound

pectate-lyases, thermostable

	Enzymes	Enzyme	EC number
[Ref.: #67770]		Pectate lyase	4.2.2.2

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #3527]	Sample type/isolated from	mud, thermal spa
[Ref.: #3527]	Geographic location (country and/or sea, region)	Abano Terme
[Ref.: #3527]	Country	Italy
[Ref.: #3527]	Country ISO 3 Code	ITA
[Ref.: #3527]	Continent	Europe

[Ref.: #67770]	Sample type/isolated from	Medicinal mud (fango) of Abano Terme
[Ref.: #67770]	Country	Italy
[Ref.: #67770]	Country ISO 3 Code	ITA
[Ref.: #67770]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	-
#Environmental	#Terrestrial	#Mud (Sludge)

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #3527]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Thermoanaerobacter italicus 16S rRNA gene, strain DSM 9252	AJ250846	1480	ENA	580331 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Thermoanaerobacter italicus Ab9	GCA_000025645	complete	GenBank	580331 tax ID	*
[Ref.: #66792]	Thermoanaerobacter italicus Ab9	580331.4	complete	PATRIC	580331 tax ID	*
[Ref.: #66792]	Thermoanaerobacter italicus Ab9, DSM 9252	646564579	complete	JGI IMG/M	580331 tax ID	*

[Ref.: #3527]

GC-content

34.4 mol%

high performance liquid chromatography (HPLC)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Thermoanaerobacter italicus Ab9 Ab9 NCBI: GCA_000025645.1
[Ref.: #69480]	motile	yes	86.012	no
[Ref.: #69480]	flagellated	no	87.437	no
[Ref.: #69480]	gram-positive	no	71.841	no
[Ref.: #69480]	anaerobic	yes	99.571	no
[Ref.: #69480]	aerobic	no	99.121	yes
[Ref.: #69480]	halophile	no	95.934	no
[Ref.: #69480]	spore-forming	yes	93.122	no
[Ref.: #69480]	thermophile	yes	100	no
[Ref.: #69480]	glucose-util	yes	92.746	no
[Ref.: #69480]	glucose-ferment	yes	61.947	no

Availability in culture collections External links

[Ref.: #3527]

Culture collection no.

DSM 9252, JCM 16815

[Ref.: #85847]

SI-ID 48603

References

#3527

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 9252

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#85847

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID48603.1 )

* These data were automatically processed and therefore are not curated

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Thermoanaerobacter italicus Ab9 Ab9

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