Name: Thermoanaerobacter brockii subsp. brockii HTD4
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 16834

Type strain:

Species: Thermoanaerobacter brockii subsp. brockii

Strain Designation: HTD4

Culture col. no.: DSM 1457, ATCC 33075

Strain history: <- J. G. Zeikus, University of Wisconsin, Department of Bacteriology, Madison, Wisconsin, USA; HTD4

NCBI tax ID(s): 29323 (species), 151039 (subspecies)

SI-ID 43363

ATCC 53556, ATCC 33075, DSM 1457

Special Collections

DSMZ

Section

When using BacDive for research please cite our paper

Thermoanaerobacter brockii subsp. brockii HTD4 is an anaerobe, thermophilic bacterium that produces alcohol and was isolated from spring sediment.

alcohol production
anaerobe
thermophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	09-12-2024 (DD-MM-YYYY)
	Domain	*Bacteria*
	Phylum	*Bacillota*
	Class	*Clostridia*
	Order	*Thermoanaerobacterales*
	Family	*Thermoanaerobacteraceae*
	Genus	*Thermoanaerobacter*
	Species	**Thermoanaerobacter brockii subsp. brockii**
	Full Scientific Name (LPSN)	Thermoanaerobacter brockii subsp. brockii (Zeikus et al. 1983) Cayol et al. 1995

Information on culture and growth conditions Culture and growth conditions

[Ref.: #771]

Culture medium

THERMOANAEROBACTER BROCKII MEDIUM (DSMZ Medium 144)

[Ref.: #771]

Culture medium growth

[Ref.: #771]

Culture medium link

Medium recipe at MediaDive

[Ref.: #771]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #771]			growth	65 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #771]

Oxygen tolerance

anaerobe

[Ref.: #771]

Name of produced compound

ethanol

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #771]	Sample type/isolated from	spring sediment
[Ref.: #771]	Geographic location (country and/or sea, region)	Wyoming, Yellowstone Natl. Park, Washburn
[Ref.: #771]	Country	USA
[Ref.: #771]	Country ISO 3 Code	USA
[Ref.: #771]	Continent	North America
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Sediment
#Environmental	#Aquatic	#Spring

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence L09165 (>99% sequence identity) for Thermoanaerobacter from Microbeatlas

Aquatic Samples	592
Soil Samples	200
Animal Samples	1695
Plant Samples	99
Total Samples	2586

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #771]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #771]	Thermoanaerobacter brockii strain DSM 1457 16S ribosomal RNA, partial sequence	NR_117610	1529	GenBank ENA	29323 tax ID
[Ref.: #771]	Thermoanaerobacter brockii strain DSM 1457 16S ribosomal RNA, partial sequence	NR_117609	1528	GenBank ENA	29323 tax ID
[Ref.: #771]	Thermoanaerobacter brockii strain DSM 1457 16S ribosomal RNA, partial sequence	NR_117608	1528	GenBank ENA	29323 tax ID
[Ref.: #20218]	Thermoanaerobacter brockii subsp. brockii partial 16S rRNA gene, type strain DSM 1457T, clone 1	HE601761	1602	GenBank ENA	151039 tax ID	*
[Ref.: #20218]	Thermoanaerobacter brockii subsp. brockii partial 16S rRNA gene, type strain DSM 1457T, clone 2	HE601762	1528	GenBank ENA	151039 tax ID	*
[Ref.: #20218]	Thermoanaerobacter brockii subsp. brockii partial 16S rRNA gene, type strain DSM 1457T, clone 3	HE601763	1528	GenBank ENA	151039 tax ID	*
[Ref.: #20218]	Thermoanaerobacter brockii subsp. brockii partial 16S rRNA gene, type strain DSM 1457T, clone 4	HE601764	1529	GenBank ENA	151039 tax ID	*
[Ref.: #20218]	Thermoanaerobacter brockii (DSM 1457) 16S ribosomal RNA (16S rRNA) gene	L09165	1513	GenBank ENA	29323 tax ID	*
[Ref.: #20218]	T.brockii 16S ribosomal RNA, part	X58349	1166	GenBank ENA	29323 tax ID	*

[Ref.: #771]

GC-content

30 mol%

Availability in culture collections External links

[Ref.: #771]

Culture collection no.

DSM 1457, ATCC 33075

[Ref.: #85845]

SI-ID 43363

Literature:

Topic	Title	Authors	Journal	DOI	Year
Metabolism	Amino Acid Metabolism of Thermoanaerobacter Strain AK90: The Role of Electron-Scavenging Systems in End Product Formation.	Scully SM, Orlygsson J	J Amino Acids	10.1155/2015/410492	2015	*

References

#771	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 1457

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#85845

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID43363.1 )

* These data were automatically processed and therefore are not curated

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