Thermoanaerobacter brockii subsp. finnii (DSM 3389, AKo-1)

Name: Thermoanaerobacter brockii subsp. finnii (DSM 3389, AKo-1)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 16833

Type strain

Strain Designation AKo-1

Culture col. no. DSM 3389 AKo-1

NCBI tax ID(s) 509193 29325

Special Collections DSMZ

Links

Thermoanaerobacter brockii subsp. finnii AKo-1 is an anaerobe, thermophilic prokaryote that produces alcohol and was isolated from lake sediment.

alcohol production anaerobe thermophilic genome sequence 16S sequence

Name and taxonomic classification

SI-ID 41924

ATCC 43586,DSM 3389

@ref 20215

Last LPSN update 2025-12-16 09:50:56

Domain Bacillati

Phylum Bacillota

Class Clostridia

Order Thermoanaerobacterales

Family Thermoanaerobacteraceae

Genus Thermoanaerobacter

Species Thermoanaerobacter brockii subsp. finnii

Full scientific name Thermoanaerobacter brockii subsp. finnii (Schmid et al. 1986) Cayol et al. 1995

Synonyms (2)

Thermoanaerobacter finnii
"Thermoanaerobacter pseudethanolicus subsp. finnii"

Morphology

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
1373	THERMOANAEROBACTER BROCKII MEDIUM (DSMZ Medium 144)		Medium recipe at MediaDive	Name: THERMOANAEROBACTER BROCKII MEDIUM (DSMZ Medium 144) Composition: Trypticase peptone 10.0 g/l D-Glucose 5.0 g/l Yeast extract 3.0 g/l K2HPO4 1.5 g/l Na2S x 9 H2O 1.0 g/l NH4Cl 0.9 g/l KH2PO4 0.75 g/l MgCl2 x 6 H2O 0.4 g/l Nitrilotriacetic acid 0.1152 g/l NaCl 0.009 g/l FeSO4 x 7 H2O 0.003 g/l FeCl2 x 4 H2O 0.0018 g/l CoCl2 x 6 H2O 0.00153 g/l MnCl2 x 4 H2O 0.0009 g/l CaCl2 x 2 H2O 0.0009 g/l ZnCl2 0.0009 g/l Sodium resazurin 0.0005 g/l NiCl2 x 6 H2O 0.00027 g/l Na2SeO3 x 5 H2O 0.00027 g/l CuCl2 0.00018 g/l H3BO3 9e-05 g/l Na2MoO4 x 2 H2O 9e-05 g/l Pyridoxine hydrochloride 5e-05 g/l p-Aminobenzoic acid 2.5e-05 g/l (DL)-alpha-Lipoic acid 2.5e-05 g/l Riboflavin 2.5e-05 g/l Calcium D-(+)-pantothenate 2.5e-05 g/l Thiamine HCl 2.5e-05 g/l Nicotinic acid 2.5e-05 g/l Biotin 1e-05 g/l Folic acid 1e-05 g/l Vitamin B12 5e-07 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
1373	positive	growth	65	thermophilic

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
1373	anaerobe
125438	anaerobe	91.36
125439	anaerobe	100

Compound production

@ref	Compound
1373	amylase
1373	ethanol
1373	pullulanase

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Aquatic	#Lake (large)
#Environmental	#Aquatic	#Sediment

Isolation

@ref	Sample type	Geographic location
1373	lake sediment	Lake Kivu, country of origin unknown

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
1373	1	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM17529v2 assembly for Thermoanaerobacter brockii subsp. finnii Ako-1	complete	GCA_000175295	509193.4	649633102	509193	99.34

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
20218	Thermoanaerobacter finii (DSM 3389) 16S ribosomal RNA (16S rRNA) gene	L09166	1523		29325

GC content

1373

GC-content (mol%)32.0

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Thermoanaerobacter brockii subsp. finnii Ako-1
PATRIC: 509193.4

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	yes	63.20	no
125439	motility	BacteriaNetⓘ	yes	72.80	no
125439	gram_stain	BacteriaNetⓘ	variable	78.90	no
125439	oxygen_tolerance	BacteriaNetⓘ	anaerobe	100.00	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Thermoanaerobacter brockii subsp. finnii Ako-1 Ako-1
NCBI: GCA_000175295.2

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	65.30	no
125438	anaerobic	anaerobicⓘ	yes	91.36	yes
125438	aerobic	aerobicⓘ	no	98.61	yes
125438	spore-forming	spore-formingⓘ	yes	73.10	no
125438	thermophilic	thermophileⓘ	yes	77.28	no
125438	flagellated	motile2+ⓘ	yes	75.68	no

Literature

Topic	Title	Authors	Journal	DOI	Year
	Fermentation of Mannitol Extracts From Brown Macro Algae by Thermophilic Clostridia.	Chades T, Scully SM, Ingvadottir EM, Orlygsson J.	Front Microbiol	10.3389/fmicb.2018.01931	2018
Phylogeny	Phylogenetic analysis of anaerobic thermophilic bacteria: aid for their reclassification.	Rainey FA, Ward NL, Morgan HW, Toalster R, Stackebrandt E.	J Bacteriol	10.1128/jb.175.15.4772-4779.1993	1993
	Keratin Degradation by Fervidobacterium pennavorans, a Novel Thermophilic Anaerobic Species of the Order Thermotogales.	Friedrich AB, Antranikian G.	Appl Environ Microbiol	10.1128/aem.62.8.2875-2882.1996	1996

References

#1373	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 3389
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Thermoanaerobacter brockii subsp. finnii (DSM 3389, AKo-1)

Name and taxonomic classification

Morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Compound production

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_000175295

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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