Thermoanaerobacter ethanolicus JW200 is an anaerobe bacterium that produces alcohol and was isolated from mud, alkaline hot spring.
alcohol production anaerobe genome sequence 16S sequence Bacteria| @ref 20215 |
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| Domain Bacteria |
| Phylum Bacillota |
| Class Clostridia |
| Order Thermoanaerobacterales |
| Family Thermoanaerobacteraceae |
| Genus Thermoanaerobacter |
| Species Thermoanaerobacter ethanolicus |
| Full scientific name Thermoanaerobacter ethanolicus Wiegel and Ljungdahl 1982 |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 705 | CALDICELLULOSIRUPTOR MEDIUM (DSMZ Medium 640) | Medium recipe at MediaDive | Name: CALDICELLULOSIRUPTOR MEDIUM (DSMZ Medium 640) Composition: Trypticase peptone 2.0 g/l K2HPO4 1.5 g/l Cellobiose 1.0 g/l Yeast extract 1.0 g/l NH4Cl 0.9 g/l NaCl 0.9 g/l L-Cysteine HCl x H2O 0.75 g/l KH2PO4 0.75 g/l MgCl2 x 6 H2O 0.4 g/l HCl 0.0025 g/l FeCl3 x 6 H2O 0.0025 g/l FeCl2 x 4 H2O 0.0015 g/l Sodium resazurin 0.0005 g/l CoCl2 x 6 H2O 0.00019 g/l MnCl2 x 4 H2O 0.0001 g/l ZnCl2 7e-05 g/l Na2MoO4 x 2 H2O 3.6e-05 g/l NiCl2 x 6 H2O 2.4e-05 g/l H3BO3 6e-06 g/l CuCl2 x 2 H2O 2e-06 g/l Distilled water |
| @ref | Growth | Type | Temperature (°C) | |
|---|---|---|---|---|
| 705 | positive | growth | 65 |
| Cat1 | Cat2 | Cat3 | |
|---|---|---|---|
| #Environmental | #Terrestrial | #Mud (Sludge) | |
| #Environmental | #Aquatic | #Thermal spring | |
| #Condition | #Alkaline | - | |
| #Condition | #Thermophilic (>45°C) | - |
| @ref | Sample type | Geographic location | Country | Country ISO 3 Code | Continent | |
|---|---|---|---|---|---|---|
| 705 | mud, alkaline hot spring | Wyoming, Yellowstone Natl. Park | USA | USA | North America |
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 124043 | ASM372231v1 assembly for Thermoanaerobacter ethanolicus JW 200 | complete | 509192 | 97.25 |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 705 | Thermoanaerobacter ethanolicus JW 200 16S ribosomal RNA gene, partial sequence | L09162 | 1740 | 1757 |
| 705 | GC-content (mol%)31.9 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | oxygen_tolerance | BacteriaNetⓘ | anaerobe | 99.12 | no |
| 125439 | gram_stain | BacteriaNetⓘ | variable | 59.07 | no |
| 125439 | motility | BacteriaNetⓘ | yes | 63.79 | no |
| 125439 | spore_formation | BacteriaNetⓘ | yes | 59.06 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | yes | 54.52 | no |
| 125438 | anaerobic | anaerobicⓘ | yes | 95.28 | yes |
| 125438 | spore-forming | spore-formingⓘ | yes | 75.44 | no |
| 125438 | aerobic | aerobicⓘ | no | 95.74 | yes |
| 125438 | thermophilic | thermophileⓘ | yes | 78.01 | yes |
| 125438 | flagellated | motile2+ⓘ | yes | 75.12 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Genetics | Genome Editing of the Anaerobic Thermophile Thermoanaerobacter ethanolicus Using Thermostable Cas9. | Le Y, Fu Y, Sun J. | Appl Environ Microbiol | 10.1128/aem.01773-20 | 2020 | |
| Natural competence in Thermoanaerobacter and Thermoanaerobacterium species. | Shaw AJ, Hogsett DA, Lynd LR. | Appl Environ Microbiol | 10.1128/aem.00402-10 | 2010 | ||
| Metabolism | Ethanol production by the hyperthermophilic archaeon Pyrococcus furiosus by expression of bacterial bifunctional alcohol dehydrogenases. | Keller MW, Lipscomb GL, Nguyen DM, Crowley AT, Schut GJ, Scott I, Kelly RM, Adams MWW. | Microb Biotechnol | 10.1111/1751-7915.12486 | 2017 | |
| Fermentation of Mannitol Extracts From Brown Macro Algae by Thermophilic Clostridia. | Chades T, Scully SM, Ingvadottir EM, Orlygsson J. | Front Microbiol | 10.3389/fmicb.2018.01931 | 2018 | ||
| Differences in Xylan Degradation by Various Noncellulolytic Thermophilic Anaerobes and Clostridium thermocellum. | Wiegel J, Mothershed CP, Puls J. | Appl Environ Microbiol | 10.1128/aem.49.3.656-659.1985 | 1985 | ||
| Keratin Degradation by Fervidobacterium pennavorans, a Novel Thermophilic Anaerobic Species of the Order Thermotogales. | Friedrich AB, Antranikian G. | Appl Environ Microbiol | 10.1128/aem.62.8.2875-2882.1996 | 1996 | ||
| Enzymology | Clostridium thermocellum JW20 (ATCC 31549) is a coculture with Thermoanaerobacter ethanolicus. | Erbeznik M, Jones CR, Dawson KA, Strobel HJ. | Appl Environ Microbiol | 10.1128/aem.63.7.2949-2951.1997 | 1997 | |
| Metabolism | Strain selection in carbon-limited chemostats affects reproducibility of Thermoanaerobacter ethanolicus fermentations. | Lacis LS, Lawford HG. | Appl Environ Microbiol | 10.1128/aem.58.2.761-764.1992 | 1992 | |
| Enzymology | Purification and characterization of a thermostable beta-xylosidase from Thermoanaerobacter ethanolicus. | Shao W, Wiegel J. | J Bacteriol | 10.1128/jb.174.18.5848-5853.1992 | 1992 | |
| Thermoanaerobacter ethanolicus in a comparison of the growth efficiencies of thermophilic and mesophilic anaerobes. | Lacis LS, Lawford HG. | J Bacteriol | 10.1128/jb.163.3.1275-1278.1985 | 1985 | ||
| Thermoanaerobacter ethanolicus Growth and Product Yield from Elevated Levels of Xylose or Glucose in Continuous Cultures. | Lacis LS, Lawford HG. | Appl Environ Microbiol | 10.1128/aem.57.2.579-585.1991 | 1991 | ||
| Phylogeny | Phylogenetic analysis of anaerobic thermophilic bacteria: aid for their reclassification. | Rainey FA, Ward NL, Morgan HW, Toalster R, Stackebrandt E. | J Bacteriol | 10.1128/jb.175.15.4772-4779.1993 | 1993 | |
| Single-step ethanol production from lignocellulose using novel extremely thermophilic bacteria. | Svetlitchnyi VA, Kensch O, Falkenhan DA, Korseska SG, Lippert N, Prinz M, Sassi J, Schickor A, Curvers S. | Biotechnol Biofuels | 10.1186/1754-6834-6-31 | 2013 | ||
| Metabolism | Electrotransformation of Thermoanaerobacter ethanolicus JW200. | Peng H, Fu B, Mao Z, Shao W | Biotechnol Lett | 10.1007/s10529-006-9184-6 | 2006 | |
| A markerless gene deletion and integration system for Thermoanaerobacter ethanolicus. | Shao X, Zhou J, Olson DG, Lynd LR | Biotechnol Biofuels | 10.1186/s13068-016-0514-1 | 2016 | ||
| Metabolism | Amino Acid Metabolism of Thermoanaerobacter Strain AK90: The Role of Electron-Scavenging Systems in End Product Formation. | Scully SM, Orlygsson J | J Amino Acids | 10.1155/2015/410492 | 2015 | |
| Metabolism | Binding mode of the oxidized alpha-anomer of NAD+ to RSP, a Rex-family repressor. | Zheng Y, Ko TP, Yang Y, Shao W, Guo RT | Biochem Biophys Res Commun | 10.1016/j.bbrc.2014.12.049 | 2014 | |
| Metabolism | Distinct structural features of Rex-family repressors to sense redox levels in anaerobes and aerobes. | Zheng Y, Ko TP, Sun H, Huang CH, Pei J, Qiu R, Wang AH, Wiegel J, Shao W, Guo RT | J Struct Biol | 10.1016/j.jsb.2014.11.001 | 2014 | |
| Metabolism | Enhanced catalytic efficiency in quercetin-4'-glucoside hydrolysis of Thermotoga maritima beta-glucosidase A by site-directed mutagenesis. | Sun H, Xue Y, Lin Y | J Agric Food Chem | 10.1021/jf501932v | 2014 | |
| Teth137, a Conserved Factor of Unknown Function from Thermoanaerobacter ethanolicus JW200, Represses the Transcription of the adhE Gene In Vitro. | Jing Q, Wang J, Wu G | Indian J Microbiol | 10.1007/s12088-012-0339-y | 2012 | ||
| Metabolism | [Characterization of an acidotolerant, thermophilic Thermoanaerobacter sp. xyl-d with a high xylose conversion]. | Zhang W, Ma S, Deng Y, Zhang H | Wei Sheng Wu Xue Bao | 2011 | ||
| Enzymology | Comparison of three thermostable beta-glucosidases for application in the hydrolysis of soybean isoflavone glycosides. | Song X, Xue Y, Wang Q, Wu X | J Agric Food Chem | 10.1021/jf1046915 | 2011 | |
| Enzymology | Cloning and analysis of the xylAB operon and characterization of xylose isomerase from Thermoanaerobacter ethanolicus. | Fan L, Zhang Y, Qu W, Wang J, Shao W | Biotechnol Lett | 10.1007/s10529-010-0463-x | 2010 | |
| Enzymology | Molecular genetic characterization of the thermostable L-lactate dehydrogenase gene (ldhL) of Thermoanaerobacter ethanolicus JW200 and biochemical characterization of the enzyme. | Zhou Q, Shao WL | Biochemistry (Mosc) | 10.1134/s0006297910040188 | 2010 | |
| Enzymology | The aldehyde/alcohol dehydrogenase (AdhE) in relation to the ethanol formation in Thermoanaerobacter ethanolicus JW200. | Peng H, Wu G, Shao W | Anaerobe | 10.1016/j.anaerobe.2007.09.004 | 2007 | |
| Metabolism | Effect of nutrient limitation on product formation during continuous fermentation of xylose with Thermoanaerobacter ethanolicus JW200 Fe(7). | Hild HM, Stuckey DC, Leak DJ | Appl Microbiol Biotechnol | 10.1007/s00253-002-1175-5 | 2002 | |
| Enzymology | Cloning, sequencing and expression in Escherichia coli of the primary alcohol dehydrogenase gene from Thermoanaerobacter ethanolicus JW200. | Holt PJ, Williams RE, Jordan KN, Lowe CR, Bruce NC | FEMS Microbiol Lett | 10.1111/j.1574-6968.2000.tb09262.x | 2000 | |
| Enzymology | Cloning, sequencing, and characterization of the bifunctional xylosidase-arabinosidase from the anaerobic thermophile thermoanaerobacter ethanolicus. | Mai V, Wiegel J, Lorenz WW | Gene | 10.1016/s0378-1119(00)00106-2 | 2000 | |
| Induction and Regeneration of Autoplasts from Clostridium thermohydrosulfuricum JW102 and Thermoanaerobacter ethanolicus JW200. | Peteranderl R, Canganella F, Holzenburg A, Wiegel J | Appl Environ Microbiol | 10.1128/aem.59.10.3498-3501.1993 | 1993 | ||
| Enzymology | Purification and Properties of Primary and Secondary Alcohol Dehydrogenases from Thermoanaerobacter ethanolicus. | Bryant FO, Wiegel J, Ljungdahl LG | Appl Environ Microbiol | 10.1128/aem.54.2.460-465.1988 | 1988 |
| #705 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 2246 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #124043 | Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy . |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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