Name: Thermus thermamylovorans CFH 72773
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 168303

Type strain:

Species: Thermus thermamylovorans

Culture col. no.: CFH 72773, KCTC 43129, CCTCC AB 2018244

NCBI tax ID(s): 2509362 (species)

Section

Thermus thermamylovorans CFH 72773 is an aerobe, Gram-negative, rod-shaped bacterium that forms circular colonies and was isolated from enrichment of a hot spring sample collected from Dientan town, Tengchong county, Yunnan province, south-western China..

colony-forming
Gram-negative
rod-shaped
aerobe
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Deinococcota*
	Class	*Deinococci*
	Order	*Thermales*
	Family	*Thermaceae*
	Genus	*Thermus*
	Species	**Thermus thermamylovorans**
	Full Scientific Name (LPSN)	Thermus thermamylovorans Ming et al. 2020

Information on morphological and physiological properties Morphology

[Ref.: #69607]	Gram stain	negative

[Ref.: #69607]	Cell length	0.7-1.9 µm

[Ref.: #69607]	Cell width	0.2-0.3 µm

[Ref.: #69607]	Cell shape	rod-shaped

[Ref.: #69607]	Motility	no

[Ref.: #69607]	Colony color	yellow
[Ref.: #69607]	Colony shape	circular
[Ref.: #69607]	Cultivation medium used	T5

Information on culture and growth conditions Culture and growth conditions

[Ref.: #69607]

Culture medium

[Ref.: #69607]

Culture medium growth

	Temperatures	Kind of temperature		Temperature
[Ref.: #69607]			growth	37-75 °C

	pH	Kind of pH		pH
[Ref.: #69607]			growth	6.0-8.0

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69607]

Oxygen tolerance

aerobe

[Ref.: #69607]

Ability of spore formation

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #69607]		NaCl		growth	0-2.0	%(w/v)

[Ref.: #69607]	Observation	Positive for milk coagulation but negative for milk peptonization
[Ref.: #69607]	Observation	Polar lipid profile comprises of aminophospholipid, glycolipid, and two phospholipids.

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #69607]	2-dehydro-D-gluconate ChEBI	+	builds acid from
[Ref.: #69607]	2-oxobutanoate ChEBI	-	assimilation
[Ref.: #69607]	2-oxoglutarate ChEBI	+	assimilation
[Ref.: #69607]	3-methylglucose ChEBI	-	assimilation
[Ref.: #69607]	4-hydroxyphenylacetic acid ChEBI	-	assimilation
[Ref.: #69607]	5-dehydro-D-gluconate ChEBI	+	builds acid from
[Ref.: #69607]	acetic acid ChEBI	-	assimilation
[Ref.: #69607]	acetoacetate ChEBI	+	assimilation
[Ref.: #69607]	adipate ChEBI	-	assimilation
[Ref.: #69607]	alpha-D-glucose ChEBI	+	assimilation
[Ref.: #69607]	alpha-hydroxybutyrate	-	assimilation
[Ref.: #69607]	amygdalin ChEBI	-	assimilation
[Ref.: #69607]	amygdalin ChEBI	+	builds acid from
[Ref.: #69607]	arbutin ChEBI	+	builds acid from
[Ref.: #69607]	aztreonam ChEBI	-	assimilation
[Ref.: #69607]	beta-hydroxybutyrate ChEBI	-	assimilation
[Ref.: #69607]	bromosuccinate ChEBI	-	assimilation
[Ref.: #69607]	butyrate ChEBI	-	assimilation
[Ref.: #69607]	cellobiose ChEBI	-	assimilation
[Ref.: #69607]	cellobiose ChEBI	+	builds acid from
[Ref.: #69607]	cellulose ChEBI	-	hydrolysis
[Ref.: #69607]	citrate ChEBI	-	assimilation
[Ref.: #69607]	D-arabinose ChEBI	-	assimilation
[Ref.: #69607]	D-arabinose ChEBI	+	builds acid from
[Ref.: #69607]	D-arabitol ChEBI	-	assimilation
[Ref.: #69607]	D-arabitol ChEBI	+	builds acid from
[Ref.: #69607]	D-aspartate ChEBI	-	assimilation
[Ref.: #69607]	D-fructose ChEBI	-	assimilation
[Ref.: #69607]	D-fructose 6-phosphate ChEBI	+	assimilation
[Ref.: #69607]	D-fucose ChEBI	+	builds acid from
[Ref.: #69607]	D-galactose ChEBI	+	assimilation
[Ref.: #69607]	D-galacturonic acid ChEBI	+	assimilation
[Ref.: #69607]	D-gluconate ChEBI	-	assimilation
[Ref.: #69607]	D-glucose ChEBI	+	assimilation
[Ref.: #69607]	D-glucose 6-phosphate ChEBI	-	assimilation
[Ref.: #69607]	D-glucuronate ChEBI	+	assimilation
[Ref.: #69607]	D-lyxose ChEBI	+	builds acid from
[Ref.: #69607]	D-malate ChEBI	-	assimilation
[Ref.: #69607]	D-mannitol ChEBI	-	assimilation
[Ref.: #69607]	D-mannose ChEBI	-	assimilation
[Ref.: #69607]	D-saccharate ChEBI	-	assimilation
[Ref.: #69607]	D-salicin ChEBI	-	assimilation
[Ref.: #69607]	D-serine ChEBI	-	assimilation
[Ref.: #69607]	D-sorbitol ChEBI	-	assimilation
[Ref.: #69607]	D-tagatose ChEBI	+	builds acid from
[Ref.: #69607]	D-trehalose ChEBI	-	assimilation
[Ref.: #69607]	D-xylose ChEBI	+	builds acid from
[Ref.: #69607]	dextrin ChEBI	+	assimilation
[Ref.: #69607]	erythritol ChEBI	+	builds acid from
[Ref.: #69607]	esculin ChEBI	+	hydrolysis
[Ref.: #69607]	formate ChEBI	-	assimilation
[Ref.: #69607]	fructose ChEBI	+	builds acid from
[Ref.: #69607]	fusidate ChEBI	-	assimilation
[Ref.: #69607]	galactarate ChEBI	-	assimilation
[Ref.: #69607]	galactitol ChEBI	+	builds acid from
[Ref.: #69607]	galactose ChEBI	+	builds acid from
[Ref.: #69607]	gamma-aminobutyric acid ChEBI	-	assimilation
[Ref.: #69607]	gelatin ChEBI	+	hydrolysis
[Ref.: #69607]	gentiobiose ChEBI	-	assimilation
[Ref.: #69607]	gentiobiose ChEBI	+	builds acid from
[Ref.: #69607]	gluconate ChEBI	+	builds acid from
[Ref.: #69607]	glucose ChEBI	+	builds acid from
[Ref.: #69607]	glucuronamide ChEBI	+	assimilation
[Ref.: #69607]	glycerol ChEBI	-	assimilation
[Ref.: #69607]	glycerol ChEBI	+	builds acid from
[Ref.: #69607]	glycogen ChEBI	+	builds acid from
[Ref.: #69607]	glycyl-L-proline ChEBI	-	assimilation
[Ref.: #69607]	hexanoate ChEBI	-	assimilation
[Ref.: #69607]	hydrogen sulfide ChEBI	-	assimilation
[Ref.: #69607]	indole ChEBI	-	assimilation
[Ref.: #69607]	inosine ChEBI	-	assimilation
[Ref.: #69607]	inulin ChEBI	+	builds acid from
[Ref.: #69607]	L-alanine ChEBI	-	assimilation
[Ref.: #69607]	L-arabinose ChEBI	+	assimilation
[Ref.: #69607]	L-arabinose ChEBI	+	builds acid from
[Ref.: #69607]	L-arabitol ChEBI	+	builds acid from
[Ref.: #69607]	L-arginine ChEBI	-	assimilation
[Ref.: #69607]	L-arginine ChEBI	+	assimilation
[Ref.: #69607]	L-fucose ChEBI	-	assimilation
[Ref.: #69607]	L-fucose ChEBI	+	builds acid from
[Ref.: #69607]	L-galactonic acid gamma-lactone ChEBI	+	assimilation
[Ref.: #69607]	L-glutamate ChEBI	-	assimilation
[Ref.: #69607]	L-histidine ChEBI	-	assimilation
[Ref.: #69607]	L-histidine ChEBI	+	assimilation
[Ref.: #69607]	L-lysine ChEBI	-	assimilation
[Ref.: #69607]	L-malate ChEBI	-	assimilation
[Ref.: #69607]	L-pyroglutamic acid 2-naphthylamide ChEBI	-	assimilation
[Ref.: #69607]	L-rhamnose ChEBI	+	assimilation
[Ref.: #69607]	L-serine ChEBI	-	assimilation
[Ref.: #69607]	L-xylose ChEBI	+	builds acid from
[Ref.: #69607]	lactate ChEBI	-	assimilation
[Ref.: #69607]	lactose ChEBI	-	assimilation
[Ref.: #69607]	lactose ChEBI	+	builds acid from
[Ref.: #69607]	malate ChEBI	-	assimilation
[Ref.: #69607]	maltose ChEBI	-	assimilation
[Ref.: #69607]	maltose ChEBI	+	builds acid from
[Ref.: #69607]	mannitol ChEBI	+	builds acid from
[Ref.: #69607]	mannose ChEBI	+	builds acid from
[Ref.: #69607]	melezitose ChEBI	+	builds acid from
[Ref.: #69607]	melibiose ChEBI	-	assimilation
[Ref.: #69607]	melibiose ChEBI	+	builds acid from
[Ref.: #69607]	methyl (R)-lactate ChEBI	-	assimilation
[Ref.: #69607]	methyl alpha-D-mannoside ChEBI	+	builds acid from
[Ref.: #69607]	methyl beta-D-glucopyranoside ChEBI	-	assimilation
[Ref.: #69607]	methyl beta-D-xylopyranoside ChEBI	+	builds acid from
[Ref.: #69607]	methyl D-glucoside ChEBI	+	builds acid from
[Ref.: #69607]	methyl pyruvate ChEBI	-	assimilation
[Ref.: #69607]	myo-inositol ChEBI	-	assimilation
[Ref.: #69607]	myo-inositol ChEBI	+	builds acid from
[Ref.: #69607]	N-acetyl-beta-D-mannosamine ChEBI	-	assimilation
[Ref.: #69607]	n-acetyl-D-galactosamine ChEBI	-	assimilation
[Ref.: #69607]	N-acetyl-D-glucosamine ChEBI	-	assimilation
[Ref.: #69607]	N-acetyl-D-glucosamine ChEBI	+	builds acid from
[Ref.: #69607]	n-acetyl-neuraminic acid	-	assimilation
[Ref.: #69607]	niaproof ChEBI	-	assimilation
[Ref.: #69607]	nitrate ChEBI	-	assimilation
[Ref.: #69607]	pectin ChEBI	-	assimilation
[Ref.: #69607]	phenylacetate ChEBI	-	assimilation
[Ref.: #69607]	potassium gluconate ChEBI	-	assimilation
[Ref.: #69607]	propionate ChEBI	+	assimilation
[Ref.: #69607]	quinate ChEBI	-	assimilation
[Ref.: #69607]	raffinose ChEBI	-	assimilation
[Ref.: #69607]	raffinose ChEBI	+	builds acid from
[Ref.: #69607]	rhamnose ChEBI	+	builds acid from
[Ref.: #69607]	ribitol ChEBI	+	builds acid from
[Ref.: #69607]	ribose ChEBI	+	builds acid from
[Ref.: #69607]	salicin ChEBI	+	builds acid from
[Ref.: #69607]	sodium bromate ChEBI	-	assimilation
[Ref.: #69607]	sodium butyrate ChEBI	+	assimilation
[Ref.: #69607]	sodium citrate ChEBI	-	assimilation
[Ref.: #69607]	sodium lactate ChEBI	-	assimilation
[Ref.: #69607]	sorbitol ChEBI	+	builds acid from
[Ref.: #69607]	sorbose ChEBI	+	builds acid from
[Ref.: #69607]	stachyose ChEBI	-	assimilation
[Ref.: #69607]	starch ChEBI	+	hydrolysis
[Ref.: #69607]	sucrose ChEBI	-	assimilation
[Ref.: #69607]	sucrose ChEBI	+	builds acid from
[Ref.: #69607]	trehalose ChEBI	+	builds acid from
[Ref.: #69607]	turanose ChEBI	+	assimilation
[Ref.: #69607]	turanose ChEBI	+	builds acid from
[Ref.: #69607]	tween 20 ChEBI	+	degradation
[Ref.: #69607]	tween 40 ChEBI	-	degradation
[Ref.: #69607]	tween 60 ChEBI	-	degradation
[Ref.: #69607]	tween 80 ChEBI	-	degradation
[Ref.: #69607]	xylan ChEBI	-	hydrolysis
[Ref.: #69607]	xylitol ChEBI	+	builds acid from
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite	Production
[Ref.: #69607]		hydrogen sulfide ChEBI	no
[Ref.: #69607]		nitrate ChEBI	no

	Enzyme	Enzyme activity	EC number
[Ref.: #69607]	alpha-galactosidase	+	3.2.1.22
[Ref.: #69607]	arginine dihydrolase	+	3.5.3.6
[Ref.: #69607]	catalase	+	1.11.1.6
[Ref.: #69607]	cytochrome oxidase	-	1.9.3.1
[Ref.: #69607]	urease	+	3.5.1.5

Fatty acid profile

Metadata FA analysis

Reference

[Ref.: #69607]

Fatty acid	Percentage
C15:0 iso	37.1
C17:0 iso	22
C16:0 iso	19.9
C17:0 anteiso	5.7
C15:0 anteiso	4.7
C17:0	4.7
C14:0 iso	1.4
C18:0 iso	1.3
C14:0	0.6
C12:0	0.5
C13:0 iso	0.5
C16:0 anteiso	0.3
C18:0	0.2
C18:1 w9c	0.2
C19:0 iso	0.1

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #69607]	Sample type/isolated from	enrichment of a hot spring sample collected from Dientan town, Tengchong county, Yunnan province, south-western China.
[Ref.: #69607]	Geographic location (country and/or sea, region)	Dientan town, Tengchong county, Yunnan province
[Ref.: #69607]	Country	China
[Ref.: #69607]	Country ISO 3 Code	CHN
[Ref.: #69607]	Continent	Asia
* marker position based on {}

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20215]	Thermus thermamylovorans strain CFH 72773 16S ribosomal RNA gene, partial sequence	MK418796	1472	ENA	2509362 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #69607]	Thermus thermamylovorans CFH 72773T	GCA_004307015	contig	GenBank	2509362 tax ID
[Ref.: #69607]	genome sequence	SIJL00000000		GenBank	2509362 tax ID

[Ref.: #69607]

GC-content

69.5 mol%

genome sequence analysis

Availability in culture collections External links

[Ref.: #20215]

Culture collection no.

CFH 72773, KCTC 43129, CCTCC AB 2018244

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Thermus thermamylovorans sp. nov., isolated from a hot spring.	Ming H, Zhao ZL, Ji WL, Ding CL, Cheng LJ, Niu MM, Li M, Yi BF, Xia TT, Nie GX	Int J Syst Evol Microbiol	10.1099/ijsem.0.003965	2020	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#69607

Hong Ming, Zhuo-li Zhao, Wei-li Ji, Chen-Long Ding, Li-jiao Cheng, Ming-ming Niu, Meng Li, Bing-fang Yi, Ting-ting Xia and Guo-xing Nie: Thermus thermamylovorans sp. nov., isolated from a hot spring. IJSEM 70: 2020 ( DOI 10.1099/ijsem.0.003965 )

* These data were automatically processed and therefore are not curated

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