Borrelia miyamotoi (HT31, JCM 9579)

Name: Borrelia miyamotoi (HT31, JCM 9579)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 168084

Type strain

Strain Designation HT31

Culture col. no. HT31 JCM 9579

NCBI tax ID(s) 47466

Special Collections JCM

Borrelia miyamotoi HT31 is a bacterium of the family Borreliaceae.

genome sequence 16S sequence Bacteria

Name and taxonomic classification

Culture Collection Numbers

HT31 JCM 9579

@ref 20215

Last LPSN update 2026-05-29 08:46:17

Domain Bacteria

Phylum Spirochaetota

Class Spirochaetia

Order Spirochaetales

Family Borreliaceae

Genus Borrelia

Species Borrelia miyamotoi

Full scientific name Borrelia miyamotoi Fukunaga et al. 1995

Morphology

Culture and growth conditions

Physiology and metabolism

Spore formation

@ref	Spore formation	Confidence
125438		94.372

Isolation, sampling and environmental information

Taxonmaps

69479

Global distribution of 16S sequence D45192 (>99% sequence identity) for Borrelia miyamotoi subclade from Microbeatlas

Aquatic Samples	4
Soil Samples	4
Animal Samples	76
Plant Samples	1
Total Samples	85

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
20215	2	Risk group

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM1966850v1 assembly for Borrelia miyamotoi HT31	complete	GCA_019668505	47466.156	8111856723	47466	96.31

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
20215	Borrelia miyamotoi gene for 16S rRNA, partial sequence	D45192	1368		47466

Genome-based predictions

Predictions

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Borrelia miyamotoi HT31
NCBI: GCA_019668505.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	83.96	no
125438	anaerobic	anaerobicⓘ	no	78.39	no
125438	aerobic	aerobicⓘ	no	93.71	no
125438	spore-forming	spore-formingⓘ	no	94.37	no
125438	thermophilic	thermophileⓘ	no	91.15	no
125438	flagellated	motile2+ⓘ	yes	50.62	no

Literature

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )

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