Pseudoalteromonas donghaensis (KCTC 22219, LMG 24469, HJ51)

Name: Pseudoalteromonas donghaensis (KCTC 22219, LMG 24469, HJ51)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 168082

Type strain

Strain Designation HJ51

Culture col. no. KCTC 22219 LMG 24469 HJ51

NCBI tax ID(s) 570156

Special Collections KCTC

Links

Pseudoalteromonas donghaensis HJ51 is a bacterium of the family Pseudoalteromonadaceae.

genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 323908

LMG 24469,KCTC 22219

@ref 20215

Last LPSN update 2026-05-29 08:46:17

Domain Bacteria

Phylum Pseudomonadota

Class Gammaproteobacteria

Order Alteromonadales

Family Pseudoalteromonadaceae

Genus Pseudoalteromonas

Species Pseudoalteromonas donghaensis

Full scientific name Pseudoalteromonas donghaensis Oh et al. 2011

Morphology

Cell morphology

@ref	Gram stain	Confidence	Motility
125438	negative	100
125438		90.9

Culture and growth conditions

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125439	obligate aerobe	97.314

Spore formation

@ref	Spore formation	Confidence
125439		99.107

Isolation, sampling and environmental information

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
20215	1	Risk group

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM351510v1 assembly for Pseudoalteromonas lipolytica HJ51	complete	GCA_003515105	621376.3	8069522627	621376	98.76

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
20215	Pseudoalteromonas donghaensis strain HJ51 16S ribosomal RNA gene, partial sequence	FJ754319	1506		621376

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM351510v1 assembly for Pseudoalteromonas lipolytica HJ51
BV-BRC: 621376.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	motility	BacteriaNetⓘ	yes	62.40	no
125439	gram_stain	BacteriaNetⓘ	negative	89.23	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	97.31	no
125439	spore_formation	BacteriaNetⓘ	no	99.11	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Pseudoalteromonas donghaensis HJ51
NCBI: GCA_003515105.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	100.00	no
125438	anaerobic	anaerobicⓘ	no	95.97	no
125438	aerobic	aerobicⓘ	yes	69.53	no
125438	spore-forming	spore-formingⓘ	no	88.23	no
125438	thermophilic	thermophileⓘ	no	100.00	no
125438	flagellated	motile2+ⓘ	yes	90.90	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Pseudoalteromonas shioyasakiensis sp. nov., a marine polysaccharide-producing bacterium.	Matsuyama H, Sawazaki K, Minami H, Kasahara H, Horikawa K, Yumoto I	Int J Syst Evol Microbiol	10.1099/ijs.0.055558-0	2013
Phylogeny	Pseudoalteromonas arabiensis sp. nov., a marine polysaccharide-producing bacterium.	Matsuyama H, Minami H, Kasahara H, Kato Y, Murayama M, Yumoto I	Int J Syst Evol Microbiol	10.1099/ijs.0.043604-0	2012
Phylogeny	Pseudoalteromonas donghaensis sp. nov., isolated from seawater.	Oh YS, Park AR, Lee JK, Lim CS, Yoo JS, Roh DH	Int J Syst Evol Microbiol	10.1099/ijs.0.022541-0	2010

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

Rate our new design

Content

About us

Pseudoalteromonas donghaensis (KCTC 22219, LMG 24469, HJ51)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Physiology and metabolism

Oxygen tolerance

Spore formation

Isolation, sampling and environmental information

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_003515105

16S sequences

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

Help

Social Media