Name: Meridianimarinicoccus aquatilis SM1902
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 167730

Type strain:

Species: Meridianimarinicoccus aquatilis

Strain Designation: SM1902

Culture col. no.: KCTC 72045, MCCC 1K03596, CCTCC AB 2018346

NCBI tax ID(s): 2552766 (species)

Special Collections

Section

Meridianimarinicoccus aquatilis SM1902 is an aerobe, Gram-negative bacterium that forms circular colonies and was isolated from sediment sample from river estuary.

colony-forming
Gram-negative
aerobe
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	09-12-2024 (DD-MM-YYYY)
	Domain	*Bacteria*
	Phylum	*Pseudomonadota*
	Class	*Alphaproteobacteria*
	Order	*Rhodobacterales*
	Family	*Roseobacteraceae*
	Genus	*Meridianimarinicoccus*
	Species	**Meridianimarinicoccus aquatilis**
	Full Scientific Name (LPSN)	Meridianimarinicoccus aquatilis (Sun et al. 2020) Huang et al. 2024

Synonym

Fluviibacterium aquatile

Information on morphological and physiological properties Morphology

[Ref.: #69495]	Gram stain	negative
[Ref.: #69480]	Gram stain	negative Confidence in %97.833

[Ref.: #69495]	Cell length	1.5-4.6 µm

[Ref.: #69495]	Cell width	1.3-2.6 µm

[Ref.: #69495]	Cell shape	rod-shaped
[Ref.: #69495]	Cell shape	ovoid-shaped

[Ref.: #69495]	Motility	no

[Ref.: #69495]	Colony color	beige
[Ref.: #69495]	Colony shape	circular
[Ref.: #69495]	Incubation period	3 days
[Ref.: #69495]	Cultivation medium used	TYS

Information on culture and growth conditions Culture and growth conditions

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Culture medium

TYS

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Culture medium growth

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Culture medium composition

expand / minimize

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Culture medium

TYS

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Culture medium growth

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Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #69495]			growth	10.0-37.0 °C
[Ref.: #69495]			optimum	25.0-30.0 °C

	pH	Kind of pH		pH
[Ref.: #69495]			optimum	7
[Ref.: #69495]			growth	6.0-10.0

Information on physiology and metabolism Physiology and metabolism

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Oxygen tolerance

aerobe

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Ability of spore formation

no Confidence in %90.057

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #69495]		NaCl		growth	0.5-13	%(w/v)
[Ref.: #69495]		NaCl		optimum	2.5	%(w/v)

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #69495]	adipate ChEBI	-	assimilation
[Ref.: #69495]	arabinose ChEBI	-	assimilation
[Ref.: #69495]	casein	-	hydrolysis
[Ref.: #69495]	citrate ChEBI	-	assimilation
[Ref.: #69495]	D-glucose ChEBI	-	assimilation
[Ref.: #69495]	decanoate ChEBI	-	assimilation
[Ref.: #69495]	dna ChEBI	-	hydrolysis
[Ref.: #69495]	esculin ChEBI	+	hydrolysis
[Ref.: #69495]	gluconate ChEBI	-	assimilation
[Ref.: #69495]	glucose ChEBI	-	builds acid from
[Ref.: #69495]	malate ChEBI	-	assimilation
[Ref.: #69495]	maltose ChEBI	-	assimilation
[Ref.: #69495]	mannitol ChEBI	-	assimilation
[Ref.: #69495]	mannose ChEBI	-	assimilation
[Ref.: #69495]	N-acetylglucosamine ChEBI	-	assimilation
[Ref.: #69495]	nitrate ChEBI	+	reduction
[Ref.: #69495]	phenylacetate ChEBI	-	assimilation
[Ref.: #69495]	starch ChEBI	-	hydrolysis
[Ref.: #69495]	tween 20 ChEBI	+	hydrolysis
[Ref.: #69495]	tween 40 ChEBI	-	hydrolysis
[Ref.: #69495]	tween 60 ChEBI	+	hydrolysis
[Ref.: #69495]	tween 80 ChEBI	+	hydrolysis
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite	Production
[Ref.: #69495]		indole ChEBI	no

	Enzyme	Enzyme activity	EC number
[Ref.: #69495]	acid phosphatase	+	3.1.3.2
[Ref.: #69495]	alkaline phosphatase	+	3.1.3.1
[Ref.: #69495]	alpha-chymotrypsin	-	3.4.21.1
[Ref.: #69495]	alpha-fucosidase	-	3.2.1.51
[Ref.: #69495]	alpha-galactosidase	-	3.2.1.22
[Ref.: #69495]	alpha-glucosidase	+	3.2.1.20
[Ref.: #69495]	alpha-mannosidase	-	3.2.1.24
[Ref.: #69495]	arginine dihydrolase	-	3.5.3.6
[Ref.: #69495]	beta-galactosidase	+	3.2.1.23
[Ref.: #69495]	beta-galactosidase	-	3.2.1.23
[Ref.: #69495]	beta-glucosidase	-	3.2.1.21
[Ref.: #69495]	beta-glucuronidase	-	3.2.1.31
[Ref.: #69495]	catalase	+	1.11.1.6
[Ref.: #69495]	cystine arylamidase	+/-	3.4.11.3
[Ref.: #69495]	cytochrome oxidase	+	1.9.3.1
[Ref.: #69495]	esterase (C 4)	+
[Ref.: #69495]	esterase Lipase (C 8)	+
[Ref.: #69495]	gelatinase	+
[Ref.: #69495]	leucine arylamidase	+	3.4.11.1
[Ref.: #69495]	lipase (C 14)	-
[Ref.: #69495]	N-acetyl-beta-glucosaminidase	-	3.2.1.52
[Ref.: #69495]	naphthol-AS-BI-phosphohydrolase	+
[Ref.: #69495]	trypsin	-	3.4.21.4
[Ref.: #69495]	urease	+	3.5.1.5
[Ref.: #69495]	valine arylamidase	+
	Only first 10 entries are displayed. Click here to see all.

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #69495]	Sample type/isolated from	sediment sample from river estuary
[Ref.: #69495]	Geographic location (country and/or sea, region)	Jiahe river, Yantai
[Ref.: #69495]	Country	China
[Ref.: #69495]	Country ISO 3 Code	CHN
[Ref.: #69495]	Continent	Asia
[Ref.: #69495]	Geographic location	37.5700°/121.3000°
[Ref.: #69495]	Enrichment culture	TYS
[Ref.: #69495]	Enrichment culture composition	TYS agar [0.5 % tryptone (Oxoid), 0.1 % yeast extract (Oxoid), 1.5 % agar and ASW]
[Ref.: #69495]	Enrichment culture duration	7 days
[Ref.: #69495]	Enrichment culture temperature	15 ̊C
[Ref.: #69495]	Isolation/enrichment procedure	streaking
* marker position based on {}

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20215]	Fluviibacterium aquatile strain SM1902 16S ribosomal RNA gene, partial sequence	MK628997	1386	GenBank ENA	2552766 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #69495]	genome sequence	SMZO00000000		GenBank ENA	2552766 tax ID
[Ref.: #66792]	Fluviibacterium aquatile SM1902	GCA_004358675	scaffold	GenBank ENA	2552766 tax ID	*

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GC-content

58.2 mol%

genome sequence analysis

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Fluviibacterium aquatile SM1902 NCBI: GCA_004358675.1
[Ref.: #69480]	gram-positive	gram-positiveⓘ	no	97.833	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	92.967	no
[Ref.: #69480]	aerobic	aerobicⓘ	yes	82.06	yes
[Ref.: #69480]	spore-forming	spore-formingⓘ	no	90.057	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	94.579	no
[Ref.: #69480]	flagellated	motile2+ⓘ	no	58.03	no

Availability in culture collections External links

[Ref.: #20215]

Culture collection no.

KCTC 72045, MCCC 1K03596, CCTCC AB 2018346

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Qingshengfaniella alkalisoli gen. nov., sp. nov., a p-hydroxybenzoate-degrading strain isolated from saline soil.	Wang S, Yang R, Xu L, Xing YT, Sun JQ	Int J Syst Evol Microbiol	10.1099/ijsem.0.004719	2021	*
Phylogeny	Fluviibacterium aquatile gen. nov., sp. nov., isolated from estuary sediment.	Sun YY, Dang YR, He XY, Wang JM, Liu NH, Sun ML, Li CY, Chen XL, Zhang YZ, Song XY, Yang J, Zhang XY	Int J Syst Evol Microbiol	10.1099/ijsem.0.003722	2020	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69495

Dmitriy V. Volokhov, Frances M. Gulland, Yamei Gao, Vladimir E. Chizhikov: Fluviibacterium aquatile gen. nov., sp. nov., isolated from estuary sediment. IJSEM 70: 2020 ( DOI 10.1099/ijsem.0.003722 )

* These data were automatically processed and therefore are not curated

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Fluviibacterium aquatile SM1902

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