Mucilaginibacter celer (KACC 19184, HYN0043, NBRC 112738)

Name: Mucilaginibacter celer (KACC 19184, HYN0043, NBRC 112738)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 167443

Type strain

Strain Designation HYN0043

Culture col. no. KACC 19184 HYN0043 NBRC 112738

NCBI tax ID(s) 2305508

Mucilaginibacter celer HYN0043 is a prokaryote of the family Sphingobacteriaceae.

genome sequence

Name and taxonomic classification

Culture Collection Numbers

KACC 19184 HYN0043 NBRC 112738

@ref 20215

Last LPSN update 2025-12-16 10:10:06

Domain Pseudomonadati

Phylum Bacteroidota

Class Sphingobacteriia

Order Sphingobacteriales

Family Sphingobacteriaceae

Genus Mucilaginibacter

Species Mucilaginibacter celer

Full scientific name Mucilaginibacter celer Kim et al. 2020

Morphology

Cell morphology

@ref	Gram stain	Confidence
125438	negative	95.961
125439	negative	99.7

Culture and growth conditions

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125439	obligate aerobe	98.2

Spore formation

@ref	Spore formation	Confidence
125439		98.6

Isolation, sampling and environmental information

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM357645v2 assembly for Mucilaginibacter celer HYN0043	complete	GCA_003576455	2305508.6	2840668280	2305508	98.21

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Mucilaginibacter celer HYN0043
NCBI: GCA_003576455

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	98.60	no
125439	motility	BacteriaNetⓘ	no	69.10	no
125439	gram_stain	BacteriaNetⓘ	negative	99.70	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	98.20	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Mucilaginibacter celer HYN0043
NCBI: GCA_003576455.2

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	95.96	no
125438	anaerobic	anaerobicⓘ	no	96.51	no
125438	aerobic	aerobicⓘ	yes	86.31	no
125438	spore-forming	spore-formingⓘ	no	83.65	no
125438	thermophilic	thermophileⓘ	no	96.24	no
125438	flagellated	motile2+ⓘ	no	84.25	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Mucilaginibacter celer sp. nov. and Aquirhabdus parva gen. nov., sp. nov., isolated from freshwater.	Kim M, Shin SK, Yi H	Int J Syst Evol Microbiol	10.1099/ijsem.0.004437	2020

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .

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Mucilaginibacter celer (KACC 19184, HYN0043, NBRC 112738)

Name and taxonomic classification

Culture Collection Numbers

Morphology

Cell morphology

Culture and growth conditions

Physiology and metabolism

Oxygen tolerance

Spore formation

Isolation, sampling and environmental information

Interaction and safety

Sequence information

Genome sequences

Genome browser: GCA_003576455

Genome-based predictions

Predictions

Literature

Literature

References

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