Gordonia zhaorongruii (CGMCC 4.7607, HY186, JCM 33466)

Name: Gordonia zhaorongruii (CGMCC 4.7607, HY186, JCM 33466)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 167313

Type strain

Strain Designation HY186

Culture col. no. CGMCC 4.7607 HY186 JCM 33466

NCBI tax ID(s) 2597659

Special Collections JCM

Links

Gordonia zhaorongruii HY186 is a bacterium of the family Gordoniaceae.

genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 133120

JCM 33466

@ref 20215

Last LPSN update 2026-05-29 08:46:06

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Mycobacteriales

Family Gordoniaceae

Genus Gordonia

Species Gordonia zhaorongruii

Full scientific name Gordonia zhaorongruii Zhang et al. 2021

Morphology

Cell morphology

@ref	Gram stain	Confidence	Motility
125438	positive	92.345
125438		95

Culture and growth conditions

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125439	facultative anaerobe	91.653

Spore formation

@ref	Spore formation	Confidence
125439		90.691

Isolation, sampling and environmental information

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM755900v1 assembly for Gordonia zhaorongruii HY186	complete	GCA_007559005	2597659.3	2887882214	2597659	96.55

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
20215	Gordonia zhaorongruii strain HY186 16S ribosomal RNA gene, partial sequence	MK367574	1485		2597659

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM755900v1 assembly for Gordonia zhaorongruii HY186
NCBI: GCA_007559005

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	motility	BacteriaNetⓘ	no	85.73	no
125439	gram_stain	BacteriaNetⓘ	positive	88.12	no
125439	oxygen_tolerance	BacteriaNetⓘ	facultative anaerobe	91.65	no
125439	spore_formation	BacteriaNetⓘ	no	90.69	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Gordonia zhaorongruii HY186
NCBI: GCA_007559005.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	92.35	no
125438	anaerobic	anaerobicⓘ	no	96.17	no
125438	aerobic	aerobicⓘ	yes	86.04	no
125438	spore-forming	spore-formingⓘ	no	68.00	no
125438	thermophilic	thermophileⓘ	no	97.87	no
125438	flagellated	motile2+ⓘ	no	95.00	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Gordonia jinghuaiqii sp. nov. and Gordonia zhaorongruii sp. nov., isolated from Tibetan Plateau wildlife.	Zhang G, Huang Y, Yang J, Lai XH, Jin D, Lu S, Cheng Y, Yang C, Pu J, Liang J, Huang Y, Xu J	Int J Syst Evol Microbiol	10.1099/ijsem.0.004897	2021

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

Content

About us

Gordonia zhaorongruii (CGMCC 4.7607, HY186, JCM 33466)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Physiology and metabolism

Oxygen tolerance

Spore formation

Isolation, sampling and environmental information

Interaction and safety

Sequence information

Genome sequences

Genome browser: GCA_007559005

16S sequences

Genome-based predictions

Predictions

Literature

Literature

References

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