Name: Thermus kawarayensis KW11
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 16731

Type strain:

Species: Thermus kawarayensis

Strain Designation: KW11

Culture col. no.: DSM 16200, JCM 12314

Strain history: N. Kurosawa KW11.

NCBI tax ID(s): 1293587 (strain), 171864 (species)

Section

Thermus kawarayensis KW11 is a thermophilic, Gram-negative bacterium that was isolated from hot water reservoir of Kawarayu hot springs.

Gram-negative
thermophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Deinococcota*
	Class	*Deinococci*
	Order	*Thermales*
	Family	*Thermaceae*
	Genus	*Thermus*
	Species	"Thermus kawarayensis"
	Full Scientific Name (LPSN)	Thermus kawarayensis Kurosawa et al. 2005

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	negative Confidence in %99.588

Information on culture and growth conditions Culture and growth conditions

[Ref.: #6322]

Culture medium

THERMUS THERMOPHILUS MEDIUM (DSMZ Medium 74)

[Ref.: #6322]

Culture medium growth

[Ref.: #6322]

Culture medium link

Medium recipe at MediaDive

[Ref.: #6322]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #6322]			growth	68 °C
[Ref.: #67770]			growth	70 °C

[Ref.: #6322]	Temperature range	thermophilic
[Ref.: #67770]	Temperature range	thermophilic
[Ref.: #69480]	Temperature range	thermophilic Confidence in %99.999

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69480]

Ability of spore formation

no Confidence in %99.945

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #6322]	Sample type/isolated from	hot water reservoir of Kawarayu hot springs
[Ref.: #6322]	Geographic location (country and/or sea, region)	Gunma; Kawarayu hot springs
[Ref.: #6322]	Country	Japan
[Ref.: #6322]	Country ISO 3 Code	JPN
[Ref.: #6322]	Continent	Asia

[Ref.: #67770]	Sample type/isolated from	Hot springs at Kawarayu
[Ref.: #67770]	Geographic location (country and/or sea, region)	Gunma Pref.
[Ref.: #67770]	Country	Japan
[Ref.: #67770]	Country ISO 3 Code	JPN
[Ref.: #67770]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Engineered	#Built environment	#Water reservoir (Aquarium/pool)
#Environmental	#Aquatic	#Spring
#Condition	#Thermophilic (>45°C)	-

What are isolation sources categories?

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #6322]	Thermus kawarayensis gene for 16S rRNA, partial sequence	AB071811	1470	ENA	1293587 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Thermus kawarayensis JCM 12314	GCA_001311545	contig	GenBank	1293587 tax ID
[Ref.: #66792]	Thermus kawarayensis JCM 12314	1293587.3	wgs	PATRIC	1293587 tax ID	*
[Ref.: #66792]	Thermus kawarayensis JCM 12314	2728369690	draft	JGI IMG/M	1293587 tax ID	*

[Ref.: #6322]	GC-content	69 mol%
[Ref.: #67770]	GC-content	68.9 mol%	high performance liquid chromatography (HPLC)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Thermus kawarayensis JCM 12314 PATRIC: 1293587.3
[Ref.: #69481]	spore-forming	no	81	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Thermus kawarayensis JCM 12314 PATRIC: 1293587.3
[Ref.: #69480]	motile	no	87.756	no
[Ref.: #69480]	gram-positive	no	93.958	no
[Ref.: #69480]	anaerobic	no	95.895	no
[Ref.: #69480]	aerobic	yes	70.545	no
[Ref.: #69480]	halophile	no	88.932	no
[Ref.: #69480]	spore-forming	no	94.877	no
[Ref.: #69480]	thermophile	yes	100	no
[Ref.: #69480]	glucose-util	yes	90.648	no
[Ref.: #69480]	flagellated	no	98.372	no
[Ref.: #69480]	glucose-ferment	no	84.589	no

Availability in culture collections External links

[Ref.: #6322]

Culture collection no.

DSM 16200, JCM 12314

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Thermus kawarayensis sp. nov., a new member of the genus Thermus, isolated from Japanese hot springs.	Kurosawa N, Itoh YH, Itoh T	Extremophiles	10.1007/s00792-004-0419-y	2004	*

References

#6322

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 16200

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

* These data were automatically processed and therefore are not curated

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Thermus kawarayensis JCM 12314

Thermus kawarayensis JCM 12314

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