Name: Pseudomonas lalkuanensis PE08
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 167132

Type strain:

Species: Pseudomonas lalkuanensis

Strain Designation: PE08

Culture col. no.: CCUG 73691, KCTC 72454, MCC 3792

NCBI tax ID(s): 2604832 (species)

SI-ID 410734

CCUG 73691

Pseudomonas lalkuanensis PE08 is a bacterium of the family Pseudomonadaceae.

16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Pseudomonadales*
	Family	*Pseudomonadaceae*
	Genus	*Pseudomonas*
	Species	**Pseudomonas lalkuanensis**
	Full Scientific Name (LPSN)	Pseudomonas lalkuanensis Thorat et al. 2020

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20215]	Pseudomonas lalkuanensis strain PE08 chromosome, complete genome	CP043311	6056953	ENA	2604832 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Pseudomonas lalkuanensis PE08	GCA_008807375	complete	GenBank	2604832 tax ID	*
[Ref.: #66792]	Pseudomonas sp. PE08	2604832.3	complete	PATRIC	2604832 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Pseudomonas lalkuanensis PE08 NCBI: GCA_008807375.1
[Ref.: #69480]	motile	yes	91.154	no
[Ref.: #69480]	flagellated	yes	86.834	no
[Ref.: #69480]	gram-positive	no	98.465	no
[Ref.: #69480]	anaerobic	no	98.54	no
[Ref.: #69480]	aerobic	yes	94.215	no
[Ref.: #69480]	halophile	no	82.223	no
[Ref.: #69480]	spore-forming	no	95.272	no
[Ref.: #69480]	thermophile	no	99.726	no
[Ref.: #69480]	glucose-util	yes	88.026	no
[Ref.: #69480]	glucose-ferment	no	89.916	no

Availability in culture collections External links

[Ref.: #20215]

Culture collection no.

CCUG 73691, KCTC 72454, MCC 3792

[Ref.: #114897]

SI-ID 410734

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Pseudomonas lalkuanensis sp. nov., isolated from a bacterial consortia of contaminated soil enriched for the remediation of e-waste.	Thorat V, Kirdat K, Tiwarekar B, DaCosta E, Debbarma P, Shouche Y, Sathe S, Goel R, Lodha T, Yadav A	Int J Syst Evol Microbiol	10.1099/ijsem.0.004559	2020	*
Phylogeny	Pseudomonas boanensis sp. nov., a bacterium isolated from river water used for household purposes in Boane District, Mozambique.	Nicklasson M, Martin-Rodriguez AJ, Thorell K, Higdon SM, Neves L, Mussagy A, Rydberg HA, Hernroth B, Svensson-Stadler L, Sjoling A	Int J Syst Evol Microbiol	10.1099/ijsem.0.005461	2022	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#114897

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID410734.1 )

* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Pseudomonas lalkuanensis in external resources:
SILVA
BRENDA
PANGAEA
StrainInfo
GBIF