Name: Thermosipho ferrireducens JL129W03
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 166934

Type strain:

Species: Thermosipho ferrireducens

Strain Designation: JL129W03

Culture col. no.: MCCC 1A14213, KCTC 15905

NCBI tax ID(s): 2571116 (species)

Thermosipho ferrireducens JL129W03 is a bacterium of the family Fervidobacteriaceae.

16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Thermotogota*
	Class	*Thermotogae*
	Order	*Thermotogales*
	Family	*Fervidobacteriaceae*
	Genus	*Thermosipho*
	Species	**Thermosipho ferrireducens**
	Full Scientific Name (LPSN)	Thermosipho ferrireducens Chen et al. 2021

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20215]	Thermosipho ferrireducens strain JL129W03 16S ribosomal RNA gene, partial sequence	MK818504	1455	ENA	2571116 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Thermosipho ferrireducens JL129W03	GCA_017358165	complete	GenBank	2571116 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Thermosipho ferrireducens JL129W03 NCBI: GCA_017358165.1
[Ref.: #69480]	flagellated	no	90.532	no
[Ref.: #69480]	gram-positive	no	94.659	no
[Ref.: #69480]	anaerobic	yes	99.41	no
[Ref.: #69480]	aerobic	no	99.073	no
[Ref.: #69480]	halophile	no	85.392	no
[Ref.: #69480]	spore-forming	no	93.379	no
[Ref.: #69480]	thermophile	yes	100	no
[Ref.: #69480]	glucose-util	yes	88.071	no
[Ref.: #69480]	motile	yes	90.198	no
[Ref.: #69480]	glucose-ferment	no	52.398	no

Availability in culture collections External links

[Ref.: #20215]

Culture collection no.

MCCC 1A14213, KCTC 15905

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Thermosipho ferrireducens sp.nov., an anaerobic thermophilic iron(III)-reducing bacterium isolated from a deep-sea hydrothermal sulfide deposits.	Chen Y, He Y, Shao Z, Han X, Chen D, Yang J, Zeng X	Int J Syst Evol Microbiol	10.1099/ijsem.0.004929	2021	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

* These data were automatically processed and therefore are not curated

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