Name: Smithella propionica LYP
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 16657

Type strain:

Species: Smithella propionica

Strain Designation: LYP

Culture col. no.: DSM 16934, OCM 661

Strain history: <- D. R. Boone; LYP

NCBI tax ID(s): 92485 (species)

SI-ID 100955

DSM 16934

Section

Smithella propionica LYP is an anaerobe bacterium that was isolated from up-flow anaerobic filter inoculated with digested domestic sewage sludge.

anaerobe
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Deltaproteobacteria*
	Order	*Syntrophobacterales*
	Family	*Syntrophaceae*
	Genus	*Smithella*
	Species	**Smithella propionica**
	Full Scientific Name (LPSN)	Smithella propionica Liu et al. 1999

Information on morphological and physiological properties Morphology

[Ref.: #6654]

Incubation period

>14 days

Information on physiology and metabolism Physiology and metabolism

[Ref.: #6654]

Oxygen tolerance

anaerobe

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #6654]	Sample type/isolated from	up-flow anaerobic filter inoculated with digested domestic sewage sludge
[Ref.: #6654]	Geographic location (country and/or sea, region)	Beijing
[Ref.: #6654]	Country	China
[Ref.: #6654]	Country ISO 3 Code	CHN
[Ref.: #6654]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Engineered	#Industrial	#Engineered product
#Engineered	#Waste	#Sewage sludge
#Condition	#Anoxic (anaerobic)	-

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AF126282 (>99% sequence identity) for Smithella propionica subclade from Microbeatlas

Aquatic Samples	220
Soil Samples	49
Animal Samples	11
Plant Samples	5
Total Samples	285

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #6654]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #6654]	Syntrophus sp. LYP 16S ribosomal RNA, partial sequence	AF126282	1371	ENA	92485 tax ID

Availability in culture collections External links

[Ref.: #6654]

Culture collection no.

DSM 16934, OCM 661

[Ref.: #85678]

SI-ID 100955

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Characterization of the anaerobic propionate-degrading syntrophs Smithella propionica gen. nov., sp. nov. and Syntrophobacter wolinii.	Liu Y, Balkwill DL, Aldrich HC, Drake GR, Boone DR	Int J Syst Bacteriol	10.1099/00207713-49-2-545	1999	*

References

#6654

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 16934

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#85678

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID100955.1 )

* These data were automatically processed and therefore are not curated

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