Thermocatellispora tengchongensis (DSM 45615, CCTCC AA 2011013, YIM 77521)

Name: Thermocatellispora tengchongensis (DSM 45615, CCTCC AA 2011013, YIM 77521)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 16632

Type strain

Culture col. no. DSM 45615 CCTCC AA 2011013 YIM 77521 JCM 17698

NCBI tax ID(s) 1073253

Special Collections DSMZ JCM Literature strains

History DSMZ <- S.-K. Tang, YIM; YIM 77521 <- E. Zhou JCM <-- S.-K. Tang YIM 77521.

Links

Thermocatellispora tengchongensis DSM 45615 is an aerobe, spore-forming, Gram-positive bacterium that was isolated from sandy soil from a geothermal area.

spore-forming Gram-positive aerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 400094

DSM 45615

@ref 20215

Last LPSN update 2026-05-29 08:28:49

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Streptosporangiales

Family Streptosporangiaceae

Genus Thermocatellispora

Species Thermocatellispora tengchongensis

Full scientific name Thermocatellispora tengchongensis Zhou et al. 2012

Morphology

Cell morphology

@ref	Gram stain	Confidence
30475	positive
125439		95.684
125439	positive	99.812

Pigmentation

30475

Productionyes

Multimedia

@ref:	17767
multimedia content:	DSM_45615.jpg
multimedia.multimedia content:	https://www.dsmz.de/microorganisms/photos/DSM_45615.jpg
caption:	Medium 553 37°C
intellectual property rights:	© Leibniz-Institut DSMZ
manual_annotation:	1

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
17767	GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)	Medium recipe at MediaDive	Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water
17767	GPHF-MEDIUM (DSMZ Medium 553)	Medium recipe at MediaDive	Name: GPHF-MEDIUM (DSMZ Medium 553) Composition: Agar 20.0 g/l Glucose 10.0 g/l Beef extract 5.0 g/l Yeast extract 5.0 g/l Casein peptone 5.0 g/l CaCl2 x 2 H2O 0.74 g/l Distilled water
17767	ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)	Medium recipe at MediaDive	Name: ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84) Composition: Agar 20.0 g/l Rolled oats 20.0 g/l ZnSO4 x 7 H2O 0.001 g/l MnCl2 x 4 H2O 0.001 g/l FeSO4 x 7 H2O 0.001 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
17767	positive	growth	37
30475	positive	growth	28-58
30475	positive	optimum	47.5
67770	positive	growth	37

Culture pH

@ref	Ability	Type	PH
30475	positive	optimum	7
30475	positive	growth	06-08

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
30475	aerobe
125439	obligate aerobe	99.186

Spore formation

@ref	Spore formation	Confidence
30475
125439		96.449
125438		90.594

Halophily

@ref	Salt	Growth	Tested relation	Concentration
30475	NaCl	positive	growth	0-2 %

Observation

67770

Observationquinones: MK-9(H₄), MK-9(H₆), MK-9(H₈)

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
30475	22599 ChEBI	arabinose	+	carbon source
30475	28757 ChEBI	fructose	+	carbon source
30475	28260 ChEBI	galactose	+	carbon source
30475	17716 ChEBI	lactose	+	carbon source
30475	17306 ChEBI	maltose	+	carbon source
30475	37684 ChEBI	mannose	+	carbon source
30475	17268 ChEBI	myo-inositol	+	carbon source
30475	17632 ChEBI	nitrate	+	reduction
30475	17992 ChEBI	sucrose	+	carbon source
30475	17151 ChEBI	xylitol	+	carbon source
30475	18222 ChEBI	xylose	+	carbon source

Enzymes

@ref	Value	Activity	Ec
30475	catalase	+	1.11.1.6
30475	cytochrome oxidase	+	1.9.3.1

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Terrestrial	#Sandy
#Environmental	#Terrestrial	#Soil

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
17767	sandy soil from a geothermal area	Yunnan Province, Tengchong, Rehai National Park	China	CHN	Asia
67770	Sandy soil at Rehai National Park	Tengchong, Yunnan Province, south-west China	China	CHN	Asia

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
17767	1	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM1420231v1 assembly for Thermocatellispora tengchongensis DSM 45615	scaffold	GCA_014202315	1073253.3	2861438687	1073253	53.43
124043	ASM4267526v1 assembly for Thermocatellispora tengchongensis JCM 17698	contig	GCA_042675265			1073253	37.03
124043	ASM3954300v1 assembly for Thermocatellispora tengchongensis JCM 17698	scaffold	GCA_039543005			1073253	0

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
17767	Thermocatellispora tengchongensis strain YIM 77521 16S ribosomal RNA gene, partial sequence	JN315666	1526		1073253
124043	Thermocatellispora tengchongensis strain YIM 77521 16S ribosomal RNA gene, partial sequence.	KT884888	671		1073253

GC content

@ref	GC-content (mol%)	Method
17767	73.3	high performance liquid chromatography (HPLC)
30475	73.3

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM1420231v1 assembly for Thermocatellispora tengchongensis DSM 45615
BV-BRC: 1073253.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	99.19	no
125439	gram_stain	BacteriaNetⓘ	positive	99.81	no
125439	motility	BacteriaNetⓘ	no	95.68	no
125439	spore_formation	BacteriaNetⓘ	yes	96.45	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Thermocatellispora tengchongensis DSM 45615
NCBI: GCA_014202315.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	86.57	yes
125438	anaerobic	anaerobicⓘ	no	95.56	no
125438	aerobic	aerobicⓘ	yes	88.12	yes
125438	spore-forming	spore-formingⓘ	yes	90.59	yes
125438	thermophilic	thermophileⓘ	no	94.35	no
125438	flagellated	motile2+ⓘ	no	88.00	yes

Literature

Topic	Title	Authors	Journal	DOI	Year
Transcriptome	Insight into Different Stages of Steroid Degradation in Thermophilic Saccharopolyspora hirsuta VKM Ac-666^T Strain.	Lobastova T, Fokina V, Pozdnyakova-Filatova I, Tarlachkov S, Shutov A, Donova M.	Int J Mol Sci	10.3390/ijms232416174	2022
	Steroid Metabolism in Thermophilic Actinobacterium Saccharopolyspora hirsuta VKM Ac-666^T.	Lobastova T, Fokina V, Tarlachkov S, Shutov A, Bragin E, Kazantsev A, Donova M.	Microorganisms	10.3390/microorganisms9122554	2021
	Enzyme-Catalyzed Oxidative Degradation of Ergothioneine.	Nalivaiko EY, Vasseur CM, Seebeck FP.	Angew Chem Int Ed Engl	10.1002/anie.202318445	2024
	Natural diversity screening, assay development, and characterization of nylon-6 enzymatic depolymerization.	Bell EL, Rosetto G, Ingraham MA, Ramirez KJ, Lincoln C, Clarke RW, Gado JE, Lilly JL, Kucharzyk KH, Erickson E, Beckham GT.	Nat Commun	10.1038/s41467-024-45523-5	2024
Phylogeny	Thermocatellispora soli sp. nov., isolated from hot spring soil.	Duangupama T, Pittayakhajonwut P, Thawai C	Int J Syst Evol Microbiol	10.1099/ijsem.0.003115	2018
Phylogeny	Thermocatellispora tengchongensis gen. nov., sp. nov., a new member of the family Streptosporangiaceae.	Zhou EM, Yang LL, Song ZQ, Yu TT, Nie GX, Ming H, Zhou Y, Tang SK, Li WJ	Int J Syst Evol Microbiol	10.1099/ijs.0.036897-0	2011

References

#17767	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 45615
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#26810	IJSEM 2417 2012 ( DOI 10.1099/ijs.0.036897-0 , PubMed 22140173 )
#30475	Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #26810
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Thermocatellispora tengchongensis (DSM 45615, CCTCC AA 2011013, YIM 77521)

Name and taxonomic classification

Morphology

Cell morphology

Pigmentation

Multimedia

Culture and growth conditions

Culture medium

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Observation

Metabolite utilization

Enzymes

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_014202315

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

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