Name: Streptosporangium canum 7177
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 16618

Type strain:

Species: Streptosporangium canum

Strain Designation: 7177

Culture col. no.: DSM 45034, CGMCC 4.2126, HBUM 170018, JCM 16802, NBRC 106320

Strain history: CGMCC 4.2126 <-- L.-P. Zhang et al. HBUM 170018 (=7177).

NCBI tax ID(s): 324952 (species)

SI-ID 297501

DSM 45034, CGMCC 4.2126, JCM 16802

Section

Streptosporangium canum 7177 is a spore-forming, mesophilic, Gram-positive bacterium that builds an aerial mycelium and was isolated from soil.

Gram-positive
rod-shaped
spore-forming
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Streptosporangiales*
	Family	*Streptosporangiaceae*
	Genus	*Streptosporangium*
	Species	**Streptosporangium canum**
	Full Scientific Name (LPSN)	Streptosporangium canum Zhang et al. 2009

Information on morphological and physiological properties Morphology

[Ref.: #29150]	Gram stain	positive
[Ref.: #69480]	Gram stain	positive Confidence in %100

[Ref.: #29150]	Cell length	0.75 µm

[Ref.: #29150]	Cell shape	rod-shaped

[Ref.: #29150]	Motility	no
[Ref.: #69480]	Motility	no Confidence in %94.572

[Ref.: #19902]	Colony color	Ochre yellow
[Ref.: #19902]	Incubation period	10-14 days
[Ref.: #19902]	Cultivation medium used	ISP 2

[Ref.: #19902]	Colony color	Pastel yellow
[Ref.: #19902]	Incubation period	10-14 days
[Ref.: #19902]	Cultivation medium used	ISP 3

[Ref.: #19902]	Colony color	Green beige
[Ref.: #19902]	Incubation period	10-14 days
[Ref.: #19902]	Cultivation medium used	ISP 4

[Ref.: #19902]	Colony color	Green beige
[Ref.: #19902]	Incubation period	10-14 days
[Ref.: #19902]	Cultivation medium used	ISP 5

[Ref.: #19902]	Colony color	Ochre yellow
[Ref.: #19902]	Incubation period	10-14 days
[Ref.: #19902]	Cultivation medium used	ISP 6

[Ref.: #19902]	Colony color	Green beige
[Ref.: #19902]	Incubation period	10-14 days
[Ref.: #19902]	Cultivation medium used	ISP 7

[Ref.: #29150]

Pigment production

[Ref.: #19902]	Multicellular complex forming ability	yes
[Ref.: #19902]	Multicellular complex name	Aerial Mycelium
[Ref.: #19902]	Multicellular complex color	Oyster white/ Ochre yellow
[Ref.: #19902]	Medium Name (multicellularity)	ISP 2

[Ref.: #19902]	Multicellular complex forming ability	yes
[Ref.: #19902]	Multicellular complex name	Aerial Mycelium
[Ref.: #19902]	Multicellular complex color	Oyster white/ Light pink
[Ref.: #19902]	Medium Name (multicellularity)	ISP 3

[Ref.: #19902]	Multicellular complex forming ability	yes
[Ref.: #19902]	Multicellular complex name	Aerial Mycelium
[Ref.: #19902]	Multicellular complex color	Oyster white/ Green beige
[Ref.: #19902]	Medium Name (multicellularity)	ISP 4

[Ref.: #19902]	Multicellular complex forming ability	yes
[Ref.: #19902]	Multicellular complex name	Aerial Mycelium
[Ref.: #19902]	Multicellular complex color	Oyster white
[Ref.: #19902]	Medium Name (multicellularity)	ISP 5

[Ref.: #19902]	Multicellular complex forming ability	yes
[Ref.: #19902]	Multicellular complex name	Aerial Mycelium
[Ref.: #19902]	Multicellular complex color	Green beige
[Ref.: #19902]	Medium Name (multicellularity)	ISP 6

[Ref.: #19902]	Multicellular complex forming ability	yes
[Ref.: #19902]	Multicellular complex name	Aerial Mycelium
[Ref.: #19902]	Multicellular complex color	Oyster white
[Ref.: #19902]	Medium Name (multicellularity)	ISP 7

Information on culture and growth conditions Culture and growth conditions

[Ref.: #12261]

Culture medium

ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)

[Ref.: #12261]

Culture medium growth

[Ref.: #12261]

Culture medium link

Medium recipe at MediaDive

[Ref.: #12261]

Culture medium composition

expand / minimize

[Ref.: #12261]

Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

[Ref.: #12261]

Culture medium growth

[Ref.: #12261]

Culture medium link

Medium recipe at MediaDive

[Ref.: #12261]

Culture medium composition

expand / minimize

[Ref.: #19902]

Culture medium

ISP 2

[Ref.: #19902]

Culture medium growth

[Ref.: #19902]

Culture medium composition

expand / minimize

[Ref.: #19902]

Culture medium

ISP 3

[Ref.: #19902]

Culture medium growth

[Ref.: #19902]

Culture medium composition

expand / minimize

[Ref.: #19902]

Culture medium

ISP 4

[Ref.: #19902]

Culture medium growth

[Ref.: #19902]

Culture medium composition

expand / minimize

[Ref.: #19902]

Culture medium

ISP 5

[Ref.: #19902]

Culture medium growth

[Ref.: #19902]

Culture medium composition

expand / minimize

[Ref.: #19902]

Culture medium

ISP 6

[Ref.: #19902]

Culture medium growth

[Ref.: #19902]

Culture medium composition

expand / minimize

[Ref.: #19902]

Culture medium

ISP 7

[Ref.: #19902]

Culture medium growth

[Ref.: #19902]

Culture medium composition

expand / minimize

		Temperature
[Ref.: #12261]	growth	28 °C
[Ref.: #19902]	optimum	28 °C
[Ref.: #29150]	optimum	28 °C
[Ref.: #67770]	growth	28 °C

[Ref.: #12261]	Temperature range	mesophilic
[Ref.: #19902]	Temperature range	mesophilic
[Ref.: #29150]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #29150]			optimum	7.2

Information on physiology and metabolism Physiology and metabolism

[Ref.: #29150]	Ability of spore formation	yes
[Ref.: #69481]	Ability of spore formation	yes Confidence in %100
[Ref.: #69480]	Ability of spore formation	yes Confidence in %100

[Ref.: #67770]

Observation

quinones: MK-9(H₄), MK-9(H₂)

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #29150]	arabinose ChEBI	+	carbon source
[Ref.: #29150]	cellobiose ChEBI	+	carbon source
[Ref.: #29150]	citrate ChEBI	+	carbon source
[Ref.: #29150]	dextrin ChEBI	+	carbon source
[Ref.: #29150]	fructose ChEBI	+	carbon source
[Ref.: #29150]	gelatin ChEBI	+	carbon source
[Ref.: #29150]	glucose ChEBI	+	carbon source
[Ref.: #29150]	lactate ChEBI	+	carbon source
[Ref.: #29150]	maltose ChEBI	+	carbon source
[Ref.: #29150]	mannitol ChEBI	+	carbon source
[Ref.: #29150]	mannose ChEBI	+	carbon source
[Ref.: #29150]	myo-inositol ChEBI	+	carbon source
[Ref.: #29150]	nitrate ChEBI	+	reduction
[Ref.: #29150]	rhamnose ChEBI	+	carbon source
[Ref.: #29150]	ribose ChEBI	+	carbon source
[Ref.: #29150]	urea ChEBI	+	carbon source
[Ref.: #29150]	xylose ChEBI	+	carbon source
	Only first 10 entries are displayed. Click here to see all.

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #68382]	alkaline phosphatase	+	3.1.3.1	* from API zym
[Ref.: #68382]	alpha-chymotrypsin	+	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	+	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	-	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	+	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #68382]	beta-galactosidase	-	3.2.1.23	* from API zym
[Ref.: #68382]	beta-glucosidase	+	3.2.1.21	* from API zym
[Ref.: #68382]	beta-glucuronidase	-	3.2.1.31	* from API zym
[Ref.: #68382]	cystine arylamidase	+	3.4.11.3	* from API zym
[Ref.: #68382]	esterase (C 4)	+		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	-		* from API zym
[Ref.: #29150]	gelatinase	+
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #29150]	urease	+	3.5.1.5
[Ref.: #68382]	valine arylamidase	+		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #19902]	714	not determinedn.d.	+	+	-	-	+	+	+	-	+	+	+	-	-	-	+	+	-	-	+

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #12261]	Sample type/isolated from	soil
[Ref.: #12261]	Geographic location (country and/or sea, region)	Hebei Province
[Ref.: #12261]	Country	China
[Ref.: #12261]	Country ISO 3 Code	CHN
[Ref.: #12261]	Continent	Asia

[Ref.: #67770]	Sample type/isolated from	Soil
[Ref.: #67770]	Geographic location (country and/or sea, region)	Hebei Province
[Ref.: #67770]	Country	China
[Ref.: #67770]	Country ISO 3 Code	CHN
[Ref.: #67770]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental

#Terrestrial

#Soil

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AY996844 (>99% sequence identity) for Streptosporangium from Microbeatlas

Aquatic Samples	39
Soil Samples	1189
Animal Samples	36
Plant Samples	42
Total Samples	1306

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #12261]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #12261]	Streptosporangium canum strain 7177 16S ribosomal RNA gene, partial sequence	AY996844	1468	ENA	324952 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Streptosporangium canum CGMCC 4.2126	GCA_900113865	scaffold	GenBank	324952 tax ID
[Ref.: #66792]	Streptosporangium canum strain CGMCC 4.2126	324952.4	wgs	PATRIC	324952 tax ID	*
[Ref.: #66792]	Streptosporangium canum CGMCC 4.2126	2667527412	draft	JGI IMG/M	324952 tax ID	*

[Ref.: #12261]	GC-content	67.8 mol%	high performance liquid chromatography (HPLC)
[Ref.: #12261]	GC-content	69.36 mol%
[Ref.: #29150]	GC-content	67.8 mol%
[Ref.: #67770]	GC-content	70.7 mol%	genome sequence analysis

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Streptosporangium canum CGMCC 4.2126 NCBI: GCA_900113865.1
[Ref.: #69481]	spore-forming	yes	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Streptosporangium canum strain CGMCC 4.2126 PATRIC: 324952.4
[Ref.: #69480]	gram-positive	yes	89.477	yes
[Ref.: #69480]	anaerobic	no	99.08	no
[Ref.: #69480]	halophile	no	93.505	no
[Ref.: #69480]	spore-forming	yes	94.05	no
[Ref.: #69480]	glucose-util	yes	88.803	yes
[Ref.: #69480]	motile	no	92.803	no
[Ref.: #69480]	flagellated	no	97.929	yes
[Ref.: #69480]	aerobic	yes	90.602	no
[Ref.: #69480]	thermophile	no	98.833	yes
[Ref.: #69480]	glucose-ferment	no	91.681	no

Availability in culture collections External links

[Ref.: #12261]

Culture collection no.

DSM 45034, CGMCC 4.2126, HBUM 170018, JCM 16802, NBRC 106320

[Ref.: #85640]

SI-ID 297501

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Streptosporangium canum sp. nov., isolated from soil.	Zhang LP, Zhang LM, Zhang XM	Int J Syst Evol Microbiol	10.1099/ijs.0.007401-0	2009	*

References

#12261

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 45034

#19902

Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig .

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#29150

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #25574 (see below)

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68382

Automatically annotated from API zym .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#85640

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID297501.1 )

#25574

IJSEM 1715 2009 ( DOI 10.1099/ijs.0.007401-0 , PubMed 19542128 )

* These data were automatically processed and therefore are not curated

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Streptosporangium canum CGMCC 4.2126

Streptosporangium canum strain CGMCC 4.2126

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