Name: Sphingomonas parapaucimobilis JCM 7520
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 165547

Type strain:

Species: Sphingomonas parapaucimobilis

Culture col. no.: JCM 7520, GIFU 11693

Strain history: GIFU 11693 <-- T. Oguri.

NCBI tax ID(s): 28213 (species)

SI-ID 57075

CCUG 31197, JCM 7520, CCUG 31204, KCTC 2836

Special Collections

Other strains from Sphingomonas parapaucimobilis

Section

Sphingomonas parapaucimobilis JCM 7520 is a mesophilic bacterium that was isolated from Sputum.

mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	09-12-2024 (DD-MM-YYYY)
	Domain	*Bacteria*
	Phylum	*Pseudomonadota*
	Class	*Alphaproteobacteria*
	Order	*Sphingomonadales*
	Family	*Sphingomonadaceae*
	Genus	*Sphingomonas*
	Species	**Sphingomonas parapaucimobilis**
	Full Scientific Name (LPSN)	Sphingomonas parapaucimobilis Yabuuchi et al. 1990

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	30 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #67770]

Observation

quinones: Q-10

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Sputum
* marker position based on {}

[Ref.: #69479]

Global distribution of 16S sequence LC504034 (>99% sequence identity) for Sphingomonas from Microbeatlas

Aquatic Samples	176
Soil Samples	20
Animal Samples	228
Plant Samples	17
Total Samples	441

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Sphingomonas parapaucimobilis JCM 7520 gene for 16S ribosomal RNA, partial sequence	LC504034	1411	GenBank ENA	28213 tax ID
[Ref.: #124043]	Sphingomonas parapaucimobilis 16S ribosomal RNA, partial sequence.	D38427	156	GenBank ENA	28213 tax ID	*

[Ref.: #67770]

GC-content

65.4 mol%

high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 7520, GIFU 11693

[Ref.: #114525]

SI-ID 57075

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#114525

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID57075.1 )

#124043

Dr. Isabel Schober, Dr. Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .

* These data were automatically processed and therefore are not curated

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