Thermoanaerobacter thermocopriae (JCM 7501, ATCC 51646, IAM 13577)

Name: Thermoanaerobacter thermocopriae (JCM 7501, ATCC 51646, IAM 13577)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 165540

Type strain

Culture col. no. JCM 7501 ATCC 51646 IAM 13577

NCBI tax ID(s) 1291048 29350

Special Collections JCM

History K. Yamasato JT3-3.

Links

Thermoanaerobacter thermocopriae JCM 7501 is a bacterium that was isolated from Compost of cattle feces and grass.

genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 43101

ATCC 51646,JCM 7501,IAM 13577

@ref 20215

Last LPSN update 2026-02-09 11:40:07

Domain Bacteria

Phylum Bacillota

Class Clostridia

Order Thermoanaerobacterales

Family Thermoanaerobacteraceae

Genus Thermoanaerobacter

Species Thermoanaerobacter thermocopriae

Full scientific name Thermoanaerobacter thermocopriae (Jin et al. 1988) Collins et al. 1994

Synonyms (1)

Clostridium thermocopriae

BacDive ID	Other strains from **Thermoanaerobacter thermocopriae** (1)	Type strain
163013	T. thermocopriae JCM 20927, IAM 13579

Morphology

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)
67770	positive	growth	60

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125438	anaerobe	94.198
125439	anaerobe	99.9

Isolation, sampling and environmental information

Isolation

67770

Sample typeCompost of cattle feces and grass

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67770	ASM51856v1 assembly for Thermoanaerobacter thermocopriae JCM 7501 ATCC 51646	scaffold	GCA_000518565	1291048.5	2546825535	1291048	66.85
67770	ASM131097v1 assembly for Thermoanaerobacter thermocopriae JCM 7501	contig	GCA_001310975	1291048.6	2728369665	1291048	41.09

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
67770	Clostridium thermocopriae (IAM 13577) 16S ribosomal RNA (16S rRNA) gene	L09167	1522		1291048

GC content

@ref	GC-content (mol%)	Method
67770	37.2	thermal denaturation, midpoint method (Tm)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Thermoanaerobacter thermocopriae JCM 7501 ATCC 51646
NCBI: GCA_000518565

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	anaerobe	99.90	no
125439	gram_stain	BacteriaNetⓘ	variable	73.10	no
125439	motility	BacteriaNetⓘ	yes	64.80	no
125439	spore_formation	BacteriaNetⓘ	yes	68.30	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Thermoanaerobacter thermocopriae JCM 7501
PATRIC: 1291048.5

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	58.34	no
125438	anaerobic	anaerobicⓘ	yes	94.20	no
125438	spore-forming	spore-formingⓘ	yes	74.03	no
125438	aerobic	aerobicⓘ	no	97.66	no
125438	thermophilic	thermophileⓘ	yes	79.41	yes
125438	flagellated	motile2+ⓘ	yes	73.50	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Metabolism	Genomic Analysis of Calderihabitans maritimus KKC1, a Thermophilic, Hydrogenogenic, Carboxydotrophic Bacterium Isolated from Marine Sediment.	Omae K, Yoneda Y, Fukuyama Y, Yoshida T, Sako Y.	Appl Environ Microbiol	10.1128/aem.00832-17	2017

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Thermoanaerobacter thermocopriae (JCM 7501, ATCC 51646, IAM 13577)

Name and taxonomic classification

Morphology

Culture and growth conditions

Culture temp

Physiology and metabolism

Oxygen tolerance

Isolation, sampling and environmental information

Isolation

Interaction and safety

Sequence information

Genome sequences

Genome browser: GCA_000518565

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

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