Name: Bifidobacterium longum subsp. longum JCM 7053
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 165471

Type strain:

Species: Bifidobacterium longum subsp. longum

Culture col. no.: JCM 7053, CGMCC 1.3048

Strain history: Y. Benno <-- T. Mitsuoka IV-53 (Kd-5-6).

NCBI tax ID(s): 1679 (subspecies)

Special Collections

Other strains from Bifidobacterium longum subsp. longum

Section

Bifidobacterium longum subsp. longum JCM 7053 is a mesophilic bacterium that was isolated from Infant feces.

mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	09-12-2024 (DD-MM-YYYY)
	Domain	*Bacteria*
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Bifidobacteriales*
	Family	*Bifidobacteriaceae*
	Genus	*Bifidobacterium*
	Species	**Bifidobacterium longum subsp. longum**
	Full Scientific Name (LPSN)	Bifidobacterium longum subsp. longum (Reuter 1963) Mattarelli et al. 2008 (Approved Lists 1980)

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Motility	no Confidence in %92.5

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	37 °C

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Infant feces
* marker position based on {}

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #124043]	Bifidobacterium longum subsp. longum gene for 16S rRNA, partial sequence, strain: JCM 7053.	AB116316	436	GenBank ENA	1679 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Bifidobacterium longum subsp. longum JCM 7053	GCA_017357345	complete	GenBank ENA	1679 tax ID	*
[Ref.: #66792]	Bifidobacterium longum subsp. longum strain JCM 7053	1679.304	complete	PATRIC	1679 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Bifidobacterium longum subsp. longum JCM 7053 NCBI: GCA_017357345.1
[Ref.: #69480]	gram-positive	gram-positiveⓘ	yes	87.285	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	yes	84.438	no
[Ref.: #69480]	aerobic	aerobicⓘ	no	91.14	no
[Ref.: #69480]	spore-forming	spore-formingⓘ	no	88.64	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	91.5	yes
[Ref.: #69480]	flagellated	motile2+ⓘ	no	92.5	no

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 7053, CGMCC 1.3048

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#124043

Dr. Isabel Schober, Dr. Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .

* These data were automatically processed and therefore are not curated

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