Bifidobacterium longum subsp. infantis JCM 7007 is a mesophilic prokaryote that was isolated from Feces of a human infant.
mesophilic genome sequence 16S sequence| @ref 20215 |
|
|
| Domain Bacillati |
| Phylum Actinomycetota |
| Class Actinomycetes |
| Order Bifidobacteriales |
| Family Bifidobacteriaceae |
| Genus Bifidobacterium |
| Species Bifidobacterium longum subsp. infantis |
| Full scientific name Bifidobacterium longum subsp. infantis (Reuter 1963) Mattarelli et al. 2008 |
| Synonyms (1) |
| @ref | Motility | Confidence | |
|---|---|---|---|
| 125438 | 91.5 |
| @ref | Growth | Type | Temperature (°C) | Range | |
|---|---|---|---|---|---|
| 67770 | positive | growth | 37 | mesophilic |
| 67770 | Sample typeFeces of a human infant |
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|
| 66792 | ASM1966044v1 assembly for Bifidobacterium longum subsp. infantis JCM 7007 | contig | 1682 | 77.53 |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 124043 | Bifidobacterium longum subsp. infantis gene for 16S rRNA, partial sequence, strain: JCM 7007. | AB116308 | 472 | 1682 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | spore_formation | BacteriaNetⓘ | no | 98.90 | no |
| 125439 | motility | BacteriaNetⓘ | no | 77.60 | no |
| 125439 | gram_stain | BacteriaNetⓘ | positive | 71.10 | no |
| 125439 | oxygen_tolerance | BacteriaNetⓘ | anaerobe | 98.60 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | yes | 87.53 | no |
| 125438 | anaerobic | anaerobicⓘ | yes | 80.73 | no |
| 125438 | spore-forming | spore-formingⓘ | no | 86.12 | no |
| 125438 | aerobic | aerobicⓘ | no | 92.25 | no |
| 125438 | thermophilic | thermophileⓘ | no | 92.50 | yes |
| 125438 | flagellated | motile2+ⓘ | no | 91.50 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Indole Derivatives Biosynthesis in Bifidobacterium longum subsp. infantis and the Tryptophan Substrate Availability. | Zhang SM, Wu HC, Hung JH, Huang SL. | Microb Biotechnol | 10.1111/1751-7915.70167 | 2025 | ||
| Potential Applications of Endo-beta-N-Acetylglucosaminidases From Bifidobacterium longum Subspecies infantis in Designing Value-Added, Next-Generation Infant Formulas. | Duman H, Kaplan M, Arslan A, Sahutoglu AS, Kayili HM, Frese SA, Karav S. | Front Nutr | 10.3389/fnut.2021.646275 | 2021 | ||
| Current Perspective of Sialylated Milk Oligosaccharides in Mammalian Milk: Implications for Brain and Gut Health of Newborns. | Hobbs M, Jahan M, Ghorashi SA, Wang B. | Foods | 10.3390/foods10020473 | 2021 | ||
| Biotechnology | A Human Gut Commensal Ferments Cranberry Carbohydrates To Produce Formate. | Ozcan E, Sun J, Rowley DC, Sela DA. | Appl Environ Microbiol | 10.1128/aem.01097-17 | 2017 | |
| Metabolism | Broad conservation of milk utilization genes in Bifidobacterium longum subsp. infantis as revealed by comparative genomic hybridization. | LoCascio RG, Desai P, Sela DA, Weimer B, Mills DA. | Appl Environ Microbiol | 10.1128/aem.00675-10 | 2010 | |
| Metabolism | Comparative transcriptomics reveals key differences in the response to milk oligosaccharides of infant gut-associated bifidobacteria. | Garrido D, Ruiz-Moyano S, Lemay DG, Sela DA, German JB, Mills DA. | Sci Rep | 10.1038/srep13517 | 2015 | |
| The principal fucosylated oligosaccharides of human milk exhibit prebiotic properties on cultured infant microbiota. | Yu ZT, Chen C, Kling DE, Liu B, McCoy JM, Merighi M, Heidtman M, Newburg DS. | Glycobiology | 10.1093/glycob/cws138 | 2013 | ||
| The ecological community of commensal, symbiotic, and pathogenic gastrointestinal microorganisms - an appraisal. | Haque SZ, Haque M. | Clin Exp Gastroenterol | 10.2147/ceg.s126243 | 2017 | ||
| Metabolism | A versatile and scalable strategy for glycoprofiling bifidobacterial consumption of human milk oligosaccharides. | Locascio RG, Ninonuevo MR, Kronewitter SR, Freeman SL, German JB, Lebrilla CB, Mills DA. | Microb Biotechnol | 10.1111/j.1751-7915.2008.00072.x | 2009 | |
| Metabolism | Autoinducer-2 plays a crucial role in gut colonization and probiotic functionality of Bifidobacterium breve UCC2003. | Christiaen SE, O'Connell Motherway M, Bottacini F, Lanigan N, Casey PG, Huys G, Nelis HJ, van Sinderen D, Coenye T. | PLoS One | 10.1371/journal.pone.0098111 | 2014 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #67770 | Japan Collection of Microorganism (JCM) ; Curators of the JCM; |
| #124043 | Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy . |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
You found an error in BacDive? Please tell us about it!
Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.
Successfully sent
If you want to cite this particular strain cite the following doi:
https://doi.org/10.13145/bacdive165449.20251217.10
When using BacDive for research please cite the following paper
BacDive in 2025: the core database for prokaryotic strain data