Name: Bifidobacterium longum subsp. infantis JCM 7007
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 165449

Type strain:

Species: Bifidobacterium longum subsp. infantis

Culture col. no.: JCM 7007, LMG 18901

Strain history: Y. Benno <-- T. Mitsuoka IV-7 (21143 I-63-7).

NCBI tax ID(s): 1682 (subspecies)

SI-ID 12479

LMG 18901, JCM 7007

Other strains from Bifidobacterium longum subsp. infantis

Section

Bifidobacterium longum subsp. infantis JCM 7007 is an anaerobe, mesophilic, Gram-positive bacterium that was isolated from Feces of a human infant.

Gram-positive
anaerobe
mesophilic
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Bifidobacteriales*
	Family	*Bifidobacteriaceae*
	Genus	*Bifidobacterium*
	Species	**Bifidobacterium longum subsp. infantis**
	Full Scientific Name (LPSN)	Bifidobacterium longum subsp. infantis (Reuter 1963) Mattarelli et al. 2008

Synonym

Bifidobacterium infantis

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	positive Confidence in %100

[Ref.: #69480]	Motility	no Confidence in %93.332

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	37 °C

[Ref.: #67770]

Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69480]

Oxygen tolerance

anaerobe Confidence in %98.787

[Ref.: #69480]	Ability of spore formation	no Confidence in %99.976
[Ref.: #69481]	Ability of spore formation	no Confidence in %99

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Feces of a human infant
* marker position based on {}

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Bifidobacterium longum subsp. infantis JCM 7007	GCA_019660445	contig	GenBank	1682 tax ID	*
[Ref.: #66792]	Bifidobacterium longum subsp. infantis strain JCM 7007	1682.172	wgs	PATRIC	1682 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Bifidobacterium longum subsp. infantis strain JCM 7007 PATRIC: 1682.172
[Ref.: #69481]	spore-forming	no	99	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Bifidobacterium longum subsp. infantis strain JCM 7007 PATRIC: 1682.172
[Ref.: #69480]	motile	no	93.78	no
[Ref.: #69480]	gram-positive	yes	91.071	no
[Ref.: #69480]	anaerobic	yes	96.223	no
[Ref.: #69480]	aerobic	no	94.556	no
[Ref.: #69480]	halophile	no	73.4	no
[Ref.: #69480]	spore-forming	no	96.22	no
[Ref.: #69480]	glucose-util	yes	88.589	no
[Ref.: #69480]	flagellated	no	96.867	no
[Ref.: #69480]	thermophile	no	97.097	yes
[Ref.: #69480]	glucose-ferment	yes	86.353	no

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 7007, LMG 18901

[Ref.: #114473]

SI-ID 12479

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#114473

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID12479.1 )

* These data were automatically processed and therefore are not curated

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Bifidobacterium longum subsp. infantis strain JCM 7007

Bifidobacterium longum subsp. infantis strain JCM 7007

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