Mediterraneibacter gnavus CPI C7-9 is a bacterium that was isolated from Human feces.
genome sequence 16S sequence Bacteria| @ref 20215 |
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| Domain Bacteria |
| Phylum Bacillota |
| Class Clostridia |
| Order Eubacteriales |
| Family Lachnospiraceae |
| Genus Mediterraneibacter |
| Species Mediterraneibacter gnavus |
| Full scientific name Mediterraneibacter gnavus (Moore et al. 1976) Togo et al. 2023 |
| Synonyms (1) |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 68849 | CHOPPED MEAT MEDIUM WITH CARBOHYDRATES (DSMZ Medium 110) | Medium recipe at MediaDive | Name: CHOPPED MEAT MEDIUM WITH CARBOHYDRATES (DSMZ Medium 110) Composition: Ground beef 500.0 g/l Casitone 30.0 g/l Agar 15.0 g/l K2HPO4 5.0 g/l Yeast extract 5.0 g/l D-Glucose 4.0 g/l Maltose 1.0 g/l Cellobiose 1.0 g/l Starch 1.0 g/l L-Cysteine HCl 0.5 g/l Ethanol 0.19 g/l Haemin 0.005 g/l Vitamin K3 0.0005 g/l Sodium resazurin 0.0005 g/l Distilled water Water Vitamin K1 NaOH |
Global distribution of 16S sequence X94967 (>99% sequence identity) for [Ruminococcus] gnavus subclade from Microbeatlas ![]()
| @ref | Biosafety level | Biosafety level comment | |
|---|---|---|---|
| 68849 | 1 | Risk group (German classification) |
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 66792 | ASM812149v1 assembly for Mediterraneibacter gnavus ATCC 29149 JCM6515 | complete | 411470 | 98.64 | ||||
| 66792 | ASM983137v1 assembly for Mediterraneibacter gnavus ATCC 29149 | complete | 411470 | 98.63 | ||||
| 66792 | ASM2515227v1 assembly for Mediterraneibacter gnavus ATCC 29149 | complete | 411470 | 94.7 | ||||
| 67770 | ASM295961v1 assembly for Mediterraneibacter gnavus ATCC 29149 | contig | 411470 | 76.82 | ||||
| 67770 | ASM16947v1 assembly for Mediterraneibacter gnavus ATCC 29149 | contig | 411470 | 69.6 | ||||
| 66792 | RGNV35913 assembly for Mediterraneibacter gnavus | contig | 33038 |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 67770 | [Ruminococcus] gnavus gene for 16S ribosomal RNA, partial sequence | AB910745 | 1492 | 33038 | ||
| 67770 | R.gnavus 16S ribosomal RNA | X94967 | 1481 | 411470 | ||
| 124043 | Ruminococcus gnavus gene for 16S ribosomal RNA, partial sequence, isolate: GIFU 12124. | D14136 | 1387 | 411470 | ||
| 124043 | Ruminococcus gnavus small subunit ribosomal RNA (16S rDNA) gene. | L76597 | 1423 | 411470 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | spore_formation | BacteriaNetⓘ | yes | 77.50 | no |
| 125439 | motility | BacteriaNetⓘ | yes | 82.30 | no |
| 125439 | gram_stain | BacteriaNetⓘ | positive | 76.60 | no |
| 125439 | oxygen_tolerance | BacteriaNetⓘ | anaerobe | 99.70 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | yes | 81.96 | no |
| 125438 | anaerobic | anaerobicⓘ | yes | 92.96 | no |
| 125438 | aerobic | aerobicⓘ | no | 96.01 | no |
| 125438 | spore-forming | spore-formingⓘ | no | 53.43 | no |
| 125438 | thermophilic | thermophileⓘ | no | 96.28 | yes |
| 125438 | flagellated | motile2+ⓘ | no | 80.48 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Heterologous Expression and Characterization of Cellouronate (beta-1,4-Glucuronan) Lyase from a Human Intestinal Bacterium Bacteroides luhongzhouii. | Tanaka Y, Matsumura K, Ariga M, Konno N, Ogata M, Habu N. | J Appl Glycosci (1999) | 10.5458/jag.7203102 | 2025 | ||
| Distinct gut microbiota but common metabolomic signatures between viral and MASLD HCC contribute to outcomes of combination immunotherapy. | Lee PC, Wu CJ, Hung YW, Lee CJ, Mon HC, Chi CT, Lee IC, Kuo YL, Chou SH, Luo JC, Hou MC, Huang YH. | Hepatology | 10.1097/hep.0000000000001446 | 2025 | ||
| Genetics | Complete genome sequence of Mediterraneibacter gnavus strain RI1, isolated from human feces. | Ichimura R, Tanaka K, Nakato G, Fukuda S, Arakawa K. | Microbiol Resour Announc | 10.1128/mra.00863-24 | 2024 | |
| Dysbiosis-associated gut bacterium Ruminococcus gnavus varies at the strain level in its ability to utilize key mucin component sialic acid. | Sokolovskaya OM, Uzunovic J, Peng Y, Okumura M, Wang LM, Zhou Y, Lai Z, Skippington E, Tan M-W. | Microbiol Spectr | 10.1128/spectrum.03090-24 | 2025 | ||
| Screening canine sources for novel antimicrobials reveals the circular broad-spectrum bacteriocin, caledonicin, produced by Staphylococcus caledonicus. | O'Connor M, O'Connor PM, Hourigan D, Murray E, de Farias FM, Field D, Hill C, Ross RP. | Front Microbiol | 10.3389/fmicb.2024.1470988 | 2024 | ||
| Temperate bacteriophages infecting the mucin-degrading bacterium Ruminococcus gnavus from the human gut. | Buttimer C, Khokhlova EV, Stein L, Hueston CM, Govi B, Draper LA, Ross RP, Shkoporov AN, Hill C. | Gut Microbes | 10.1080/19490976.2023.2194794 | 2023 | ||
| Pathogenicity | Gut commensal microbiota drive tailored macrophage responses. | Jones J, Garcia-Martinez KY, Lee YY, Rhee M, Nath RR, Takahashi S, Grodner B, De Vlaminck I, Leifer CA, Brito IL. | Cell Rep | 10.1016/j.celrep.2025.116157 | 2025 | |
| A core human gut microbe, Mediterraneibacter gnavus, produces a broad-spectrum bacteriocin mediterrocin. | Mingolelli G, Raherisoanjato J, Trinh D, Gao Y, Henke M. | mBio | 10.1128/mbio.01523-25 | 2025 | ||
| Phylogeny | Thomasclavelia ramosa and alcohol-related hepatocellular carcinoma: a microbial culturomics study. | Magdy Wasfy R, Abdoulaye A, Borentain P, Mbaye B, Tidjani Alou M, Caputo A, Andrieu C, Mottola G, Levasseur A, Million M, Gerolami R. | Gut Pathog | 10.1186/s13099-025-00703-6 | 2025 | |
| Phylogeny | Prosthetic joint infection caused by Mediterraneibacter gnavus following total knee arthroplasty, challenges in anaerobic bacteria identification. | Tristancho-Baro A, Vineta-Valdelvira V, Rezusta A, Garcia-Lechuz JM. | BMC Infect Dis | 10.1186/s12879-024-09656-8 | 2024 | |
| Phylogeny | Bacteraemia due to Extibacter muris in an Immunocompetent Patient: First Case, Review and a Phylogenetical Analysis. | Gourdel M, Garandeau C, Plouzeau C, Michaud A, Broutin L, Cremniter J, Burucoa C, Pichon M. | Clin Case Rep | 10.1002/ccr3.71456 | 2025 | |
| Robo-Therm, a pipeline to RNA thermometer discovery and validation. | Sharts DM, Almanza MT, Banks AV, Castellanos AM, Hernandez CGO, Lopez ML, Rodriguez D, Tong AY, Segeberg MR, Passalacqua LFM, Abdelsayed MM. | RNA | 10.1261/rna.079980.124 | 2024 | ||
| An early post-birth immune-microbiota landscape predicts the development of necrotizing enterocolitis in term newborns with congenital heart defects. | Zaikova E, Kaplina A, Belozertsev D, Kostareva A, Sitkin S, Petrova N, Mashevskiy G, Pervunina T, Kudryavtsev I, Golovkin A, Kalinina O. | Sci Rep | 10.1038/s41598-025-02542-6 | 2025 | ||
| IgG-seq identifies immune-reactive enteric bacteria in Crohn's disease with spondyloarthritis. | Maldarelli GA, Metz M, Oguntunmibi S, Tran N, Xiang G, Lukin D, Scherl EJ, Longman RS. | Gut Microbes | 10.1080/19490976.2025.2464221 | 2025 | ||
| Genetics | Limitations of MALDI-TOF MS in identifying anaerobic bacteremia: challenges in polymicrobial infections and the role of whole-genome sequencing. | Hosoda T, Suzuki M, Matsuno T, Matsui K, Ohyama K, Doi Y. | Microbiol Spectr | 10.1128/spectrum.01014-25 | 2025 | |
| Exploring the fate of Listeria monocytogenes in an in vitro digestion and fecal fermentation model: insights into survival during digestion and interaction with gut microbiota. | Kim DW, Singh S, Kim UI, An SH, Je HJ, Lee DY, Yun EJ, Koo OK. | Front Microbiol | 10.3389/fmicb.2025.1616720 | 2025 | ||
| Genetics | Calculating fast differential genome coverages among metagenomic sources using micov. | Weng Y, Guccione C, McDonald D, Oles R, Devkota S, Kopylova E, Sepich-Poore GD, Salido RA, Din MO, Song SJ, Curtius K, Chu H, Bartko A, Hasty J, Knight R. | Commun Biol | 10.1038/s42003-025-09007-6 | 2025 | |
| EzSEA: an interactive web interface for enzyme sequence evolution analysis. | Jiang AK, Zhao J, Jiang X. | Bioinform Adv | 10.1093/bioadv/vbaf118 | 2025 | ||
| Triacetin and a Mushroom Blend Restore Butyrate Production by IBS Microbiomes Ex Vivo, Thus Promoting Barrier Integrity. | Van den Abbeele P, Poppe J, Baudot A, Vu LD. | Int J Mol Sci | 10.3390/ijms26199388 | 2025 | ||
| Dissecting the association between gut microbiota and liver cancer in European and East Asian populations using Mendelian randomization analysis. | Jiang H, Song T, Li Z, An L, He C, Zheng K. | Front Microbiol | 10.3389/fmicb.2023.1255650 | 2023 | ||
| Phylogeny | Culture-based characterization of gut microbiota in inflammatory bowel disease. | Park H, Yeo S, Lee T, Han Y, Ryu CB, Huh CS. | Front Microbiol | 10.3389/fmicb.2025.1538620 | 2025 | |
| Increased fecal ethanol and enriched ethanol-producing gut bacteria Limosilactobacillus fermentum, Enterocloster bolteae, Mediterraneibacter gnavus and Streptococcus mutans in nonalcoholic steatohepatitis. | Mbaye B, Magdy Wasfy R, Borentain P, Tidjani Alou M, Mottola G, Bossi V, Caputo A, Gerolami R, Million M. | Front Cell Infect Microbiol | 10.3389/fcimb.2023.1279354 | 2023 | ||
| Deciphering oxidative stress responses in human gut microbes and fecal microbiota: a cultivation-based approach. | Zund JN, Caflisch M, Mujezinovic D, Pluss S, Lacroix C, Pugin B. | FEMS Microbiol Ecol | 10.1093/femsec/fiaf054 | 2025 | ||
| Subtractive proteomics and reverse-vaccinology approaches for novel drug targets and designing a chimeric vaccine against Ruminococcus gnavus strain RJX1120. | Dingding H, Muhammad S, Manzoor I, Ghaffar SA, Alodaini HA, Moubayed NM, Hatamleh AA, Songxiao X. | Front Immunol | 10.3389/fimmu.2025.1555741 | 2025 | ||
| Phylogeny | Gut microbiome profile of Chinese hypertension patients with and without type 2 diabetes mellitus. | Ding H, Xu Y, Cheng Y, Zhou H, Dong S, Wu J, Lv J, Hu X, Tang O. | BMC Microbiol | 10.1186/s12866-023-02967-x | 2023 | |
| Multi-omics investigation of spontaneous T2DM macaque emphasizes gut microbiota could up-regulate the absorption of excess palmitic acid in the T2DM progression | Liu X, Xie Y, Yang S, Jiang C, Shang K, Luo J, Zhang L, Hu G, Liu Q, Yue B, Fan Z, He Z, Li J. | Elife | ||||
| Mediation effect and metabolic pathways of gut microbiota in the associations between lifestyles and dyslipidemia. | Zeng L, Yu B, Zeng P, Duoji Z, Zuo H, Lian J, Yang T, Dai Y, Feng Y, Yu P, Yang J, Yang S, Dou Q. | NPJ Biofilms Microbiomes | 10.1038/s41522-025-00721-x | 2025 | ||
| Phylogeny | Distinct gut microbiomes in Thai patients with colorectal polyps. | Intarajak T, Udomchaiprasertkul W, Khoiri AN, Sutheeworapong S, Kusonmano K, Kittichotirat W, Thammarongtham C, Cheevadhanarak S. | World J Gastroenterol | 10.3748/wjg.v30.i27.3336 | 2024 | |
| Prebiotic fiber enteral supplementation after allogeneic transplantation: feasibility and impact on the microbiome. | Andersen S, Kennedy G, Banks M, Flanagan B, Henden A. | Blood Adv | 10.1182/bloodadvances.2024015703 | 2025 | ||
| Genetics | mKmer: an unbiased K-mer embedding of microbiomic single-microbe RNA sequencing data. | Mo F, Qian Q, Lu X, Zheng D, Cai W, Yao J, Chen H, Huang Y, Zhang X, Wu S, Shen Y, Bai Y, Wang Y, Jiang W, Fan L. | Brief Bioinform | 10.1093/bib/bbaf227 | 2025 | |
| Dissecting the molecular interactions between botanical extracts and the human gut microbiota. | Mancabelli L, Tarracchini C, Longhi G, Alessandri G, Ventura M, Turroni F. | Front Microbiol | 10.3389/fmicb.2025.1610170 | 2025 | ||
| Valid and accepted novel bacterial taxa isolated from non-domestic animals and taxonomic revisions published in 2023. | Munson E, Burbick CR, Lawhon SD, Krueger T, Ruiz-Reyes E. | J Clin Microbiol | 10.1128/jcm.01042-24 | 2024 | ||
| Advancing prostate cancer treatment: the role of fecal microbiota transplantation as an adjuvant therapy. | Ebrahimi R, Shahrokhi Nejad S, Fekri M, Nejadghaderi SA. | Curr Res Microb Sci | 10.1016/j.crmicr.2025.100420 | 2025 | ||
| Microbially catalyzed conjugation of GABA and tyramine to bile acids. | Mullowney MW, Fiebig A, Schnizlein MK, McMillin M, Rose AR, Koval J, Rubin D, Dalal S, Sogin ML, Chang EB, Sidebottom AM, Crosson S. | J Bacteriol | 10.1128/jb.00426-23 | 2024 | ||
| Population-level gut microbiome and its associations with environmental factors and metabolic disorders in Southwest China. | Qu Q, Dou Q, Xiang Z, Yu B, Chen L, Fan Z, Zhao X, Yang S, Zeng P. | NPJ Biofilms Microbiomes | 10.1038/s41522-025-00661-6 | 2025 | ||
| Efficient Biosynthesis of Theanderose, a Potent Prebiotic, Using Amylosucrase from Deinococcus deserti. | Kang JU, So YS, Kim G, Lee W, Seo DH, Shin H, Yoo SH. | J Agric Food Chem | 10.1021/acs.jafc.4c05763 | 2024 | ||
| RNA thermometers are widespread upstream of ABC transporter genes in bacteria. | Tong AY, Tong EL, Hannani MA, Shaffer SN, Santiago D, Ferre-D'Amare AR, Passalacqua LFM, Abdelsayed MM. | J Biol Chem | 10.1016/j.jbc.2024.107547 | 2024 | ||
| Maternal Faecalibacterium pathobionts and low-fiber diets synergize to impact offspring health: implications for atopic dermatitis | Lee D, Park J, Park S, Hwang J, Kim S, Kee S, Kim H. | Microbiome | 2025 | |||
| Balance between bile acid conjugation and hydrolysis activity can alter outcomes of gut inflammation. | Fu Y, Guzior DV, Okros M, Bridges C, Rosset SL, Gonzalez CT, Martin C, Karunarathne H, Watson VE, Quinn RA. | Nat Commun | 10.1038/s41467-025-58649-x | 2025 | ||
| Fecal Microbiome and Metabolomic Profiles of Mixed-Fed Infants Are More Similar to Formula-Fed than Breastfed Infants. | Wang M, Valizadegan N, Fields CJ, Donovan SM. | Microorganisms | 10.3390/microorganisms13010166 | 2025 | ||
| Two temperature-responsive RNAs act in concert: the small RNA CyaR and the mRNA ompX. | Guanzon DA, Pienkoss S, Brandenburg VB, Roder J, Scheller D, Dietze A, Wimbert A, Twittenhoff C, Narberhaus F. | Nucleic Acids Res | 10.1093/nar/gkaf041 | 2025 | ||
| Role of the intestinal microbiota and diet in the onset and progression of colorectal and breast cancers and the interconnection between both types of tumours | Ruiz-Saavedra S, Zapico A, Gonzalez S, Salazar N, de los Reyes-Gavilan C. | Microbiome Res Rep | 2023 | |||
| Fecal microbiota transplantation and its repercussions in patients with melanoma refractory to anti-PD-1 therapy: scope review. | Barbosa EC, Bucar EEC, Jube GR, Silveira LB, Silva NCD, Faria PCC, Ramos PLC, Moraes VRY, Barros JOB. | Rev Col Bras Cir | 10.1590/0100-6991e-20233490-en | 2023 | ||
| Update on novel validly published and included bacterial taxa derived from human clinical specimens and taxonomic revisions published in 2023. | Carella A, Carroll KC, Munson E. | J Clin Microbiol | 10.1128/jcm.01004-24 | 2024 | ||
| Impact of cryoprotective agents on human gut microbes and in vitro stabilized artificial gut microbiota communities. | Alessandri G, Rizzo SM, Mancabelli L, Fontana F, Longhi G, Turroni F, van Sinderen D, Ventura M. | Microb Biotechnol | 10.1111/1751-7915.14509 | 2024 | ||
| Phylogeny | Subspecies phylogeny in the human gut revealed by co-evolutionary constraints across the bacterial kingdom. | Doran BA, Chen RY, Giba H, Behera V, Barat B, Sundararajan A, Lin H, Sidebottom A, Pamer EG, Raman AS. | Cell Syst | 10.1016/j.cels.2024.12.008 | 2025 | |
| Pathogenicity | A universe of human gut-derived bacterial prophages: unveiling the hidden viral players in intestinal microecology | Pei Z, Liu Y, Chen Y, Pan T, Sun X, Wang H, Ross R, Lu W, Chen W. | Gut microbes | 2024 | ||
| Profiling gut microbiota and bile acid metabolism in critically ill children. | Kean IRL, Wagner J, Wijeyesekera A, De Goffau M, Thurston S, Clark JA, White DK, Ridout J, Agrawal S, Kayani R, O'Donnell R, Ramnarayan P, Peters MJ, Klein N, Holmes E, Parkhill J, Baker S, Pathan N, Pathan N. | Sci Rep | 10.1038/s41598-022-13640-0 | 2022 | ||
| Gut microbiome: a novel preventive and therapeutic target for prostatic disease. | Cao H, Zhang D, Wang P, Wang Y, Shi C, Wu H, Du H, Zhang W, Gou Z, Zhou H, Wang S. | Front Cell Infect Microbiol | 10.3389/fcimb.2024.1431088 | 2024 | ||
| Proteome | The underappreciated diversity of bile acid modifications. | Mohanty I, Mannochio-Russo H, Schweer JV, El Abiead Y, Bittremieux W, Xing S, Schmid R, Zuffa S, Vasquez F, Muti VB, Zemlin J, Tovar-Herrera OE, Morais S, Desai D, Amin S, Koo I, Turck CW, Mizrahi I, Kris-Etherton PM, Petersen KS, Fleming JA, Huan T, Patterson AD, Siegel D, Hagey LR, Wang M, Aron AT, Dorrestein PC. | Cell | 10.1016/j.cell.2024.02.019 | 2024 | |
| Intestinal microbiota signatures of clinical response and immune-related adverse events in melanoma patients treated with anti-PD-1. | McCulloch JA, Davar D, Rodrigues RR, Badger JH, Fang JR, Cole AM, Balaji AK, Vetizou M, Prescott SM, Fernandes MR, Costa RGF, Yuan W, Salcedo R, Bahadiroglu E, Roy S, DeBlasio RN, Morrison RM, Chauvin JM, Ding Q, Zidi B, Lowin A, Chakka S, Gao W, Pagliano O, Ernst SJ, Rose A, Newman NK, Morgun A, Zarour HM, Trinchieri G, Dzutsev AK. | Nat Med | 10.1038/s41591-022-01698-2 | 2022 | ||
| Pathogenicity | The Butyrogenic and Lactic Bacteria of the Gut Microbiota Determine the Outcome of Allogenic Hematopoietic Cell Transplant. | Devaux CA, Million M, Raoult D. | Front Microbiol | 10.3389/fmicb.2020.01642 | 2020 | |
| Proteome | Filling out the structural map of the NTF2-like superfamily. | Eberhardt RY, Chang Y, Bateman A, Murzin AG, Axelrod HL, Hwang WC, Aravind L | BMC Bioinformatics | 10.1186/1471-2105-14-327 | 2013 | |
| Metabolism | The role of the mucin-glycan foraging Ruminococcus gnavus in the communication between the gut and the brain. | Coletto E, Latousakis D, Pontifex MG, Crost EH, Vaux L, Perez Santamarina E, Goldson A, Brion A, Hajihosseini MK, Vauzour D, Savva GM, Juge N | Gut Microbes | 10.1080/19490976.2022.2073784 | 2022 | |
| Metabolism | The human gut symbiont Ruminococcus gnavus shows specificity to blood group A antigen during mucin glycan foraging: Implication for niche colonisation in the gastrointestinal tract. | Wu H, Crost EH, Owen CD, van Bakel W, Martinez Gascuena A, Latousakis D, Hicks T, Walpole S, Urbanowicz PA, Ndeh D, Monaco S, Sanchez Salom L, Griffiths R, Reynolds RS, Colvile A, Spencer DIR, Walsh M, Angulo J, Juge N | PLoS Biol | 10.1371/journal.pbio.3001498 | 2021 | |
| Metabolism | Uncovering a novel molecular mechanism for scavenging sialic acids in bacteria. | Bell A, Severi E, Lee M, Monaco S, Latousakis D, Angulo J, Thomas GH, Naismith JH, Juge N | J Biol Chem | 10.1074/jbc.RA120.014454 | 2020 | |
| Metabolism | Fucosidases from the human gut symbiont Ruminococcus gnavus. | Wu H, Rebello O, Crost EH, Owen CD, Walpole S, Bennati-Granier C, Ndeh D, Monaco S, Hicks T, Colvile A, Urbanowicz PA, Walsh MA, Angulo J, Spencer DIR, Juge N | Cell Mol Life Sci | 10.1007/s00018-020-03514-x | 2020 | |
| Pathogenicity | Mechanistic Insights Into the Cross-Feeding of Ruminococcus gnavus and Ruminococcus bromii on Host and Dietary Carbohydrates. | Crost EH, Le Gall G, Laverde-Gomez JA, Mukhopadhya I, Flint HJ, Juge N | Front Microbiol | 10.3389/fmicb.2018.02558 | 2018 | |
| Metabolism | Unravelling the specificity and mechanism of sialic acid recognition by the gut symbiont Ruminococcus gnavus. | Owen CD, Tailford LE, Monaco S, Suligoj T, Vaux L, Lallement R, Khedri Z, Yu H, Lecointe K, Walshaw J, Tribolo S, Horrex M, Bell A, Chen X, Taylor GL, Varki A, Angulo J, Juge N | Nat Commun | 10.1038/s41467-017-02109-8 | 2017 | |
| Metabolism | The mucin-degradation strategy of Ruminococcus gnavus: The importance of intramolecular trans-sialidases. | Crost EH, Tailford LE, Monestier M, Swarbreck D, Henrissat B, Crossman LC, Juge N | Gut Microbes | 10.1080/19490976.2016.1186334 | 2016 | |
| Metabolism | Discovery of intramolecular trans-sialidases in human gut microbiota suggests novel mechanisms of mucosal adaptation. | Tailford LE, Owen CD, Walshaw J, Crost EH, Hardy-Goddard J, Le Gall G, de Vos WM, Taylor GL, Juge N | Nat Commun | 10.1038/ncomms8624 | 2015 | |
| Metabolism | Utilisation of mucin glycans by the human gut symbiont Ruminococcus gnavus is strain-dependent. | Crost EH, Tailford LE, Le Gall G, Fons M, Henrissat B, Juge N | PLoS One | 10.1371/journal.pone.0076341 | 2013 | |
| Pathogenicity | Sex-dependent Lupus Blautia (Ruminococcus) gnavus strain induction of zonulin-mediated intestinal permeability and autoimmunity. | Silverman GJ, Deng J, Azzouz DF | Front Immunol | 10.3389/fimmu.2022.897971 | 2022 | |
| Correction to: Description of Mediterraneibacter massiliensis, gen. nov., sp. nov., a new genus isolated from the gut microbiota of an obese patient and reclassification of Ruminococcus faecis, Ruminococcus lactaris, Ruminococcus torques, Ruminococcus gnavus and Clostridium glycyrrhizinilyticum as Mediterraneibacter faecis comb. nov., Mediterraneibacter lactaris comb. nov., Mediterraneibacter torques comb. nov., Mediterraneibacter gnavus comb. nov. and Mediterraneibacter glycyrrhizinilyticus comb. nov. | Togo AH, Diop A, Bittar F, Maraninchi M, Valero R, Armstrong N, Dubourg G, Labas N, Richez M, Delerce J, Levasseur A, Fournier PE, Raoult D, Million M. | Antonie Van Leeuwenhoek | 10.1007/s10482-018-1171-0 | 2018 | ||
| Phylogeny | Sporofaciens musculi gen. nov., sp. nov., a novel bacterium isolated from the caecum of an obese mouse. | Rasmussen TS, Streidl T, Hitch TCA, Wortmann E, Deptula P, Kofoed MVW, Riedel T, Neumann-Schaal M, Hansen M, Nielsen DS, Clavel T, Vogensen FK | Int J Syst Evol Microbiol | 10.1099/ijsem.0.004673 | 2021 | |
| Phylogeny | Description of Mediterraneibacter massiliensis, gen. nov., sp. nov., a new genus isolated from the gut microbiota of an obese patient and reclassification of Ruminococcus faecis, Ruminococcus lactaris, Ruminococcus torques, Ruminococcus gnavus and Clostridium glycyrrhizinilyticum as Mediterraneibacter faecis comb. nov., Mediterraneibacter lactaris comb. nov., Mediterraneibacter torques comb. nov., Mediterraneibacter gnavus comb. nov. and Mediterraneibacter glycyrrhizinilyticus comb. nov. | Togo AH, Diop A, Bittar F, Maraninchi M, Valero R, Armstrong N, Dubourg G, Labas N, Richez M, Delerce J, Levasseur A, Fournier PE, Raoult D, Million M | Antonie Van Leeuwenhoek | 10.1007/s10482-018-1104-y | 2018 | |
| Phylogeny | Faecalimonas umbilicata gen. nov., sp. nov., isolated from human faeces, and reclassification of Eubacterium contortum, Eubacterium fissicatena and Clostridium oroticum as Faecalicatena contorta gen. nov., comb. nov., Faecalicatena fissicatena comb. nov. and Faecalicatena orotica comb. nov. | Sakamoto M, Iino T, Ohkuma M | Int J Syst Evol Microbiol | 10.1099/ijsem.0.001790 | 2017 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #67770 | Japan Collection of Microorganism (JCM) ; Curators of the JCM; |
| #68849 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 114966 |
| #69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta . |
| #124043 | Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy . |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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If you want to cite this particular strain cite the following doi:
https://doi.org/10.13145/bacdive165414.20251217.10
When using BacDive for research please cite the following paper
BacDive in 2025: the core database for prokaryotic strain data