Chelatococcus daeguensis (DSM 22069, CCUG 54519, KCTC 12979)

Name: Chelatococcus daeguensis (DSM 22069, CCUG 54519, KCTC 12979)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 1654

Type strain

Strain Designation K106

Culture col. no. DSM 22069 CCUG 54519 KCTC 12979 K106

NCBI tax ID(s) 444444

Special Collections DSMZ CCUG KCTC Literature strains

History <- KCTC <- J. H. Yoon, KRIBB <- JH Yoon, KRIBB

Links

Chelatococcus daeguensis K106 is an aerobe, mesophilic, Gram-negative prokaryote that was isolated from wastewater of a textile dye works.

Gram-negative rod-shaped aerobe mesophilic 16S sequence

Name and taxonomic classification

SI-ID 358871

CCUG 54519,KCTC 12979,LMG 25471,DSM 22069

@ref 20215

Last LPSN update 2026-02-09 11:18:09

Domain Bacteria

Phylum Pseudomonadota

Class Alphaproteobacteria

Order Hyphomicrobiales

Family Chelatococcaceae

Genus Chelatococcus

Species Chelatococcus daeguensis

Full scientific name Chelatococcus daeguensis Yoon et al. 2008

Morphology

Cell morphology

@ref	Gram stain	Cell length	Cell width	Cell shape
23146	negative	1.0-4.0 µm	0.3-0.6 µm	rod-shaped
67771	negative

Colony morphology

@ref	Colony size	Colony color	Incubation period	Medium used
23146	0.7-1.0 mm	moderate yellow	3 days	TSA
60209			2 days

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
16053	TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)		Medium recipe at MediaDive	Name: TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Distilled water
23146	Trypticase Soy Agar (TSA)

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
16053	positive	growth	37	mesophilic
23146	negative	growth	15
23146	negative	growth	52
23146	positive	maximum	51	thermophilic
23146	positive	minimum	20	psychrophilic
23146	positive	optimum	30-37	mesophilic
60209	positive	growth	30-42
67771	positive	growth	37	mesophilic

Culture pH

@ref	Ability	Type	PH	PH range
23146	positive	maximum	10.0	alkaliphile
23146	positive	minimum	5.5
23146	positive	optimum	7.0-7.5
23146		growth	5.5
23146		growth	10.5

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance
60209	aerobe
67771	aerobe

Spore formation

23146

Spore formationno

Halophily

@ref	Salt	Growth	Tested relation	Concentration
23146	NaCl	positive	optimum	0-1.0 %(w/v)
23146	NaCl	positive	growth	0-5 %(w/v)

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
23146	16808 ChEBI	2-dehydro-D-gluconate	+	carbon source
23146	17426 ChEBI	5-dehydro-D-gluconate	+	carbon source
23146	17128 ChEBI	adipate	+	carbon source
23146	27613 ChEBI	amygdalin	-	builds acid from
23146	27613 ChEBI	amygdalin	+	carbon source
23146	22599 ChEBI	arabinose	+	builds acid from
23146	18305 ChEBI	arbutin	+	carbon source
23146		casein	-	hydrolysis
23146	17057 ChEBI	cellobiose	+	carbon source
23146	16947 ChEBI	citrate	+	carbon source
23146	17108 ChEBI	D-arabinose	+	carbon source
23146	18333 ChEBI	D-arabitol	-	carbon source
23146	62318 ChEBI	D-lyxose	+	carbon source
23146	16443 ChEBI	D-tagatose	-	carbon source
23146	65327 ChEBI	D-xylose	+	carbon source
23146	17113 ChEBI	erythritol	-	carbon source
23146	4853 ChEBI	esculin	+	carbon source
23146	4853 ChEBI	esculin	+	hydrolysis
23146	28757 ChEBI	fructose	+	carbon source
23146	16813 ChEBI	galactitol	-	carbon source
23146	28260 ChEBI	galactose	+	carbon source
23146	5291 ChEBI	gelatin	-	hydrolysis
23146	28066 ChEBI	gentiobiose	+	carbon source
23146	24265 ChEBI	gluconate	+	carbon source
23146	17234 ChEBI	glucose	+	builds acid from
23146	17234 ChEBI	glucose	+	carbon source
23146	17754 ChEBI	glycerol	+	carbon source
23146	28087 ChEBI	glycogen	-	carbon source
23146	16136 ChEBI	hydrogen sulfide	-	other
23146	17368 ChEBI	hypoxanthine	-	hydrolysis
23146	15443 ChEBI	inulin	-	carbon source
23146	30849 ChEBI	L-arabinose	+	carbon source
23146	18403 ChEBI	L-arabitol	-	carbon source
23146	18287 ChEBI	L-fucose	+	carbon source
23146	17895 ChEBI	L-tyrosine	-	hydrolysis
23146	65328 ChEBI	L-xylose	+	carbon source
23146	17716 ChEBI	lactose	-	carbon source
23146	25115 ChEBI	malate	+	carbon source
23146	17306 ChEBI	maltose	-	carbon source
23146	29864 ChEBI	mannitol	-	builds acid from
23146	29864 ChEBI	mannitol	-	carbon source
23146	37684 ChEBI	mannose	+	carbon source
23146	6731 ChEBI	melezitose	-	carbon source
23146	28053 ChEBI	melibiose	-	builds acid from
23146	28053 ChEBI	melibiose	-	carbon source
23146	320061 ChEBI	methyl alpha-D-glucopyranoside	-	carbon source
23146	43943 ChEBI	methyl alpha-D-mannoside	-	carbon source
23146	74863 ChEBI	methyl beta-D-xylopyranoside	-	carbon source
23146	17268 ChEBI	myo-inositol	+	builds acid from
23146	17268 ChEBI	myo-inositol	+	carbon source
23146	506227 ChEBI	N-acetylglucosamine	-	carbon source
23146	18401 ChEBI	phenylacetate	-	carbon source
23146	16634 ChEBI	raffinose	-	carbon source
23146	26546 ChEBI	rhamnose	+	carbon source
23146	26546 ChEBI	rhamnose	+/-	builds acid from
23146	15963 ChEBI	ribitol	+	carbon source
23146	33942 ChEBI	ribose	+	carbon source
23146	17814 ChEBI	salicin	+	carbon source
23146	30911 ChEBI	sorbitol	-	builds acid from
23146	30911 ChEBI	sorbitol	-	carbon source
23146	27922 ChEBI	sorbose	+/-	carbon source
23146	28017 ChEBI	starch	-	carbon source
23146	28017 ChEBI	starch	-	hydrolysis
23146	17992 ChEBI	sucrose	-	builds acid from
23146	17992 ChEBI	sucrose	-	carbon source
23146	27082 ChEBI	trehalose	-	carbon source
23146	32528 ChEBI	turanose	-	carbon source
23146	53424 ChEBI	tween 20	-	hydrolysis
23146	53423 ChEBI	tween 40	-	hydrolysis
23146	53425 ChEBI	tween 60	-	hydrolysis
23146	53426 ChEBI	tween 80	-	hydrolysis
23146	15318 ChEBI	xanthine	-	hydrolysis
23146	17151 ChEBI	xylitol	+	carbon source

Antibiotic resistance

@ref	ChEBI	Metabolite
23146	28971	ampicillin
23146	3393	carbenicillin
23146	3542	cephalothin
23146	17698	chloramphenicol
23146	17833	gentamicin
23146	6104	kanamycin
23146	6472	lincomycin
23146	7507	neomycin
23146	28368	novobiocin
23146	16869	oleandomycin
23146	18208	penicillin g
23146	8309	polymyxin b
23146	17076	streptomycin
23146	27902	tetracycline

Enzymes

@ref	Value	Activity	Ec
23146	acid phosphatase	+	3.1.3.2
23146	alkaline phosphatase	+	3.1.3.1
23146	alpha-chymotrypsin	-	3.4.21.1
23146	alpha-fucosidase	-	3.2.1.51
23146	alpha-galactosidase	-	3.2.1.22
23146	alpha-glucosidase	-	3.2.1.20
23146	alpha-mannosidase	-	3.2.1.24
23146	arginine dihydrolase	+	3.5.3.6
23146	beta-galactosidase	-	3.2.1.23
23146	beta-glucosidase	-	3.2.1.21
23146	beta-glucuronidase	-	3.2.1.31
23146	catalase	+	1.11.1.6
23146	cystine arylamidase	-	3.4.11.3
23146	cytochrome oxidase	+	1.9.3.1
23146	esterase (C 4)	+
23146	esterase lipase (C 8)	+
23146	leucine arylamidase	+	3.4.11.1
23146	lipase (C 14)	-
23146	lysine decarboxylase	-	4.1.1.18
23146	N-acetyl-beta-glucosaminidase	-	3.2.1.52
23146	naphthol-AS-BI-phosphohydrolase	+
23146	nitrate reductase	+	1.7.99.4
23146	ornithine decarboxylase	-	4.1.1.17
23146	trypsin	-	3.4.21.4
23146	tryptophan deaminase	-	4.1.99.1
23146	urease	-	3.5.1.5
23146	valine arylamidase	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Engineered	#Industrial	-
#Engineered	#Waste	#Wastewater

Isolation

@ref	Sample type	Sampling date	Geographic location	Country	Country ISO 3 Code	Continent
16053	wastewater of a textile dye works		Daegu	Republic of Korea	KOR	Asia
60209	Wastewater of a dye-works	2004-04-01	Daegu	Republic of Korea	KOR	Asia
67771	From wastewater		Daegu	Republic of Korea	KOR	Asia

Taxonmaps

69479

Global distribution of 16S sequence EF584507 (>99% sequence identity) for Chelatococcus from Microbeatlas

Aquatic Samples	127
Soil Samples	286
Animal Samples	207
Plant Samples	60
Total Samples	680

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
16053	1	Risk group (German classification) According to TRBA 466

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
16053	Chelatococcus daeguensis strain K106 16S ribosomal RNA gene, partial sequence	EF584507	1442		444444

GC content

@ref	GC-content (mol%)	Method
16053	68.3	high performance liquid chromatography (HPLC)

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
	Critical Review on the Progress of Plastic Bioupcycling Technology as a Potential Solution for Sustainable Plastic Waste Management.	Lomwongsopon P, Varrone C.	Polymers (Basel)	10.3390/polym14224996	2022
Phylogeny	Chelatococcus caeni sp. nov., isolated from a biofilm reactor sludge sample.	Jin L, Ko SR, Lee HG, Kim BH, Kim HS, Ahn CY, Oh HM	Int J Syst Evol Microbiol	10.1099/ijs.0.000032	2014
Phylogeny	Chelatococcus sambhunathii sp. nov., a moderately thermophilic alphaproteobacterium isolated from hot spring sediment.	Panday D, Das SK	Int J Syst Evol Microbiol	10.1099/ijs.0.013466-0	2009
Phylogeny	Chelatococcus daeguensis sp. nov., isolated from wastewater of a textile dye works, and emended description of the genus Chelatococcus.	Yoon JH, Kang SJ, Im WT, Lee ST, Oh TK	Int J Syst Evol Microbiol	10.1099/ijs.0.65291-0	2008

References

#16053	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 22069
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#23146	Jung-Hoon Yoon, So-Jung Kang, Wan-Taek Im, Sung-Taik Lee, Tae-Kwang Oh: Chelatococcus daeguensis sp. nov., isolated from wastewater of a textile dye works, and emended description of the genus Chelatococcus. IJSEM 58: 2224 - 2228 2008 ( DOI 10.1099/ijs.0.65291-0 , PubMed 18768633 )
#60209	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 54519
#67771	Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Chelatococcus daeguensis (DSM 22069, CCUG 54519, KCTC 12979)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Culture and growth conditions

Culture medium

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Metabolite utilization

Antibiotic resistance

Enzymes

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

16S sequences

GC content

Genome-based predictions

Literature

Literature

References

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