Name: Sphaerimonospora mesophila T-1
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 16526

Type strain:

Species: Sphaerimonospora mesophila

Strain Designation: T-1, A-0151

Culture col. no.: DSM 43048, ATCC 27303, JCM 3151, KCC A-0151, NBRC 14179, BCRC 12464, CBS 265.72, CIP 105593, HUT 6621, IFM 1287, IFO 14179, IMSNU 22109, KCTC 9241, NCIMB 11544, NRRL B-16986, PCM 2580, VKM Ac-1953, VTT E-89374, CCRC 12464

Strain history: CIP <- 1998, JCM <- KCC: strain A-0151 <- H. Nonomura: strain T-1

NCBI tax ID(s): 37483 (species)

SI-ID 92915

ATCC 27303, JCM 3151, DSM 43048, CIP 105593, CCRC 12464, IFO 14179, NCIMB 11544, HUT 6621, VKM Ac-1953, CBS 265.72, KCTC 9241, NBRC 14179, NRRL B-16986, BCRC 12464, KACC 20073, VTT E-89374

Special Collections

Section

Sphaerimonospora mesophila T-1 is an obligate aerobe, spore-forming, mesophilic bacterium that builds an aerial mycelium and was isolated from soil.

Gram-positive
spore-forming
mesophilic
obligate aerobe
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	09-12-2024 (DD-MM-YYYY)
	Domain	*Bacteria*
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Streptosporangiales*
	Family	*Streptosporangiaceae*
	Genus	*Sphaerimonospora*
	Species	**Sphaerimonospora mesophila**
	Full Scientific Name (LPSN)	Sphaerimonospora mesophila (Nonomura and Ohara 1971) Mingma et al. 2016

	Synonym	Thermomonospora mesophila
	Synonym	Microbispora mesophila

Information on morphological and physiological properties Morphology

[Ref.: #43691]	Gram stain	positive
[Ref.: #120911]	Gram stain	positive

[Ref.: #43691]	Motility	no
[Ref.: #120911]	Motility	no

[Ref.: #120911]	Cell shape	rod-shaped

[Ref.: #19934]	Colony color	Green brown (8000)
[Ref.: #19934]	Incubation period	10-14 days
[Ref.: #19934]	Cultivation medium used	ISP 2

[Ref.: #19934]	Colony color	Sand yellow (1002)
[Ref.: #19934]	Incubation period	10-14 days
[Ref.: #19934]	Cultivation medium used	ISP 3

[Ref.: #19934]	Colony color	Green brown (8000)
[Ref.: #19934]	Incubation period	10-14 days
[Ref.: #19934]	Cultivation medium used	ISP 4

[Ref.: #19934]	Colony color	Colorless
[Ref.: #19934]	Incubation period	10-14 days
[Ref.: #19934]	Cultivation medium used	ISP 5

[Ref.: #19934]	Colony color	Sand yellow (1002)
[Ref.: #19934]	Incubation period	10-14 days
[Ref.: #19934]	Cultivation medium used	ISP 6

[Ref.: #19934]	Colony color	Colorless
[Ref.: #19934]	Incubation period	10-14 days
[Ref.: #19934]	Cultivation medium used	ISP 7

[Ref.: #19934]	Multicellular complex forming ability	yes
[Ref.: #19934]	Multicellular complex name	Aerial Mycelium
[Ref.: #19934]	Multicellular complex color	Cream (9001)
[Ref.: #19934]	Medium Name (multicellularity)	ISP 2

[Ref.: #19934]	Multicellular complex forming ability	yes
[Ref.: #19934]	Multicellular complex name	Aerial Mycelium
[Ref.: #19934]	Multicellular complex color	Cream (9001)
[Ref.: #19934]	Medium Name (multicellularity)	ISP 3

[Ref.: #19934]	Multicellular complex forming ability	yes
[Ref.: #19934]	Multicellular complex name	Aerial Mycelium
[Ref.: #19934]	Multicellular complex color	Cream (9001)
[Ref.: #19934]	Medium Name (multicellularity)	ISP 4

[Ref.: #19934]	Multicellular complex forming ability	yes
[Ref.: #19934]	Multicellular complex name	Aerial Mycelium
[Ref.: #19934]	Multicellular complex color	Cream (9001)
[Ref.: #19934]	Medium Name (multicellularity)	ISP 5

[Ref.: #19934]	Multicellular complex forming ability	no
[Ref.: #19934]	Medium Name (multicellularity)	ISP 6

[Ref.: #19934]	Multicellular complex forming ability	yes
[Ref.: #19934]	Multicellular complex name	Aerial Mycelium
[Ref.: #19934]	Multicellular complex color	Cream (9001)
[Ref.: #19934]	Medium Name (multicellularity)	ISP 7

Information on culture and growth conditions Culture and growth conditions

[Ref.: #10718]

Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

[Ref.: #10718]

Culture medium growth

[Ref.: #10718]

Culture medium link

Medium recipe at MediaDive

[Ref.: #10718]

Culture medium composition

expand / minimize

[Ref.: #19934]

Culture medium

ISP 2

[Ref.: #19934]

Culture medium growth

[Ref.: #19934]

Culture medium composition

expand / minimize

[Ref.: #19934]

Culture medium

ISP 4

[Ref.: #19934]

Culture medium growth

[Ref.: #19934]

Culture medium composition

expand / minimize

[Ref.: #19934]

Culture medium

ISP 3

[Ref.: #19934]

Culture medium growth

[Ref.: #19934]

Culture medium composition

expand / minimize

[Ref.: #19934]

Culture medium

ISP 6

[Ref.: #19934]

Culture medium growth

[Ref.: #19934]

Culture medium composition

expand / minimize

[Ref.: #19934]

Culture medium

ISP 7

[Ref.: #19934]

Culture medium growth

[Ref.: #19934]

Culture medium composition

expand / minimize

[Ref.: #19934]

Culture medium

ISP 5

[Ref.: #19934]

Culture medium growth

[Ref.: #19934]

Culture medium composition

expand / minimize

[Ref.: #41795]

Culture medium

MEDIUM 279 - for Actinomadura longicatena

[Ref.: #41795]

Culture medium growth

[Ref.: #41795]

Culture medium composition

expand / minimize

[Ref.: #43691]

Culture medium

ISP 2

[Ref.: #43691]

Culture medium growth

[Ref.: #43691]

Culture medium

ISP 4

[Ref.: #43691]

Culture medium growth

[Ref.: #43691]

Culture medium

Nutrient agar (NA)

[Ref.: #43691]

Culture medium growth

[Ref.: #10718]

Culture medium

STARCH - MINERAL SALT - AGAR (STMS) (DSMZ Medium 252)

[Ref.: #10718]

Culture medium growth

[Ref.: #10718]

Culture medium link

Medium recipe at MediaDive

[Ref.: #10718]

Culture medium composition

expand / minimize

[Ref.: #120911]

Culture medium

CIP Medium 279

[Ref.: #120911]

Culture medium growth

[Ref.: #120911]

Culture medium link

Medium recipe provided by DSMZ

[Ref.: #120911]

Culture medium

CIP Medium 280

[Ref.: #120911]

Culture medium growth

[Ref.: #120911]

Culture medium link

Medium recipe provided by DSMZ

	Kind of temperature		Temperature
[Ref.: #10718]		growth	37 °C
[Ref.: #19934]		optimum	38 °C
[Ref.: #41795]		growth	37 °C
[Ref.: #43691]		growth	20-45 °C
[Ref.: #43691]		optimum	35-40 °C
[Ref.: #67770]		growth	37 °C
[Ref.: #120911]		growth	15-41 °C
[Ref.: #120911]	no	growth	5 °C

	pH	Kind of pH		pH
[Ref.: #43691]			growth	6-9

Information on physiology and metabolism Physiology and metabolism

[Ref.: #120911]

Oxygen tolerance

obligate aerobe

[Ref.: #43691]	Spore description	Globose or spherical spores are produced
[Ref.: #43691]	Type of spore	spore
[Ref.: #43691]	Ability of spore formation	yes
[Ref.: #69481]	Ability of spore formation	yes Confidence in %90

	Salt	Tested relation		Salt conc.
[Ref.: #19934]	NaCl		maximum	2.5	%
[Ref.: #43691]	NaCl		maximum	3	%(w/v)
[Ref.: #120911]	NaCl		growth	0-2	%
[Ref.: #120911]	NaCl	no	growth	4	%
[Ref.: #120911]	NaCl	no	growth	6	%
[Ref.: #120911]	NaCl	no	growth	8	%
[Ref.: #120911]	NaCl	no	growth	10	%

[Ref.: #67770]	Observation	Solubilizes lignocellulose
[Ref.: #67770]	Observation	quinones: MK-9(H₄), MK-9(H₂), MK-9(H₆)

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #43691]	(-)-D-fructose ChEBI	+	builds acid from
[Ref.: #43691]	(-)-D-fructose ChEBI	+	degradation
[Ref.: #43691]	(-)-D-rhamnose	+	builds acid from
[Ref.: #43691]	(-)-D-rhamnose	+	degradation
[Ref.: #43691]	adenine ChEBI	-	hydrolysis
[Ref.: #19934]	arabinose ChEBI	-
[Ref.: #68368]	arginine ChEBI	+	hydrolysis	* from API 20E
[Ref.: #43691]	beta-lactose ChEBI	+	builds acid from
[Ref.: #43691]	beta-lactose ChEBI	+	degradation
[Ref.: #43691]	casein	+	hydrolysis
[Ref.: #43691]	cellobiose ChEBI	+	builds acid from
[Ref.: #43691]	cellobiose ChEBI	+	degradation
[Ref.: #19934]	cellulose ChEBI	+
[Ref.: #43691]	cellulose ChEBI	-	hydrolysis
[Ref.: #120911]	citrate ChEBI	-	carbon source
[Ref.: #68368]	citrate ChEBI	+	assimilation	* from API 20E
[Ref.: #43691]	D-galactose ChEBI	+	builds acid from
[Ref.: #43691]	D-galactose ChEBI	+	degradation
[Ref.: #43691]	D-mannitol ChEBI	+	builds acid from
[Ref.: #43691]	D-mannitol ChEBI	+	degradation
[Ref.: #43691]	D-mannose ChEBI	+	builds acid from
[Ref.: #43691]	D-mannose ChEBI	+	degradation
[Ref.: #120911]	esculin ChEBI	-	hydrolysis
[Ref.: #19934]	fructose ChEBI	+
[Ref.: #43691]	gelatin ChEBI	+	hydrolysis
[Ref.: #68368]	gelatin ChEBI	+	hydrolysis	* from API 20E
[Ref.: #19934]	glucose ChEBI	+
[Ref.: #43691]	glucose ChEBI	+	builds acid from
[Ref.: #43691]	glucose ChEBI	+	degradation
[Ref.: #120911]	glucose ChEBI	-	fermentation
[Ref.: #120911]	glucose ChEBI	-	degradation
[Ref.: #43691]	hypoxanthine ChEBI	-	hydrolysis
[Ref.: #43691]	L-arabinose ChEBI	+	builds acid from
[Ref.: #43691]	L-arabinose ChEBI	+	degradation
[Ref.: #120911]	lactose ChEBI	-	fermentation
[Ref.: #68368]	lysine ChEBI	+	degradation	* from API 20E
[Ref.: #43691]	maltose ChEBI	+	builds acid from
[Ref.: #43691]	maltose ChEBI	+	degradation
[Ref.: #19934]	mannitol ChEBI	-
[Ref.: #43691]	melibiose ChEBI	-	degradation
[Ref.: #19934]	myo-inositol ChEBI	+
[Ref.: #43691]	myo-inositol ChEBI	-	degradation
[Ref.: #43691]	nitrate ChEBI	+	reduction
[Ref.: #120911]	nitrate ChEBI	+	reduction
[Ref.: #120911]	nitrite ChEBI	-	reduction
[Ref.: #68368]	ornithine ChEBI	+	degradation	* from API 20E
[Ref.: #19934]	raffinose ChEBI	+
[Ref.: #43691]	raffinose ChEBI	-	degradation
[Ref.: #19934]	rhamnose ChEBI	+
[Ref.: #43691]	ribose ChEBI	+	builds acid from
[Ref.: #43691]	ribose ChEBI	+	degradation
[Ref.: #120911]	sodium thiosulfate ChEBI	-	builds gas from
[Ref.: #43691]	sorbose ChEBI	-	degradation
[Ref.: #43691]	starch ChEBI	+	hydrolysis
[Ref.: #19934]	sucrose ChEBI	+
[Ref.: #43691]	sucrose ChEBI	-	degradation
[Ref.: #68368]	tryptophan ChEBI	-	energy source	* from API 20E
[Ref.: #43691]	tween 80 ChEBI	+	hydrolysis
[Ref.: #68368]	urea ChEBI	-	hydrolysis	* from API 20E
[Ref.: #43691]	xanthine ChEBI	-	hydrolysis
[Ref.: #43691]	xylitol ChEBI	-	degradation
[Ref.: #19934]	xylose ChEBI	+
[Ref.: #43691]	xylose ChEBI	+	builds acid from
[Ref.: #43691]	xylose ChEBI	+	degradation
	Only first 10 entries are displayed. Click here to see all.

	Metabolite	Production
[Ref.: #43691]	hydrogen sulfide ChEBI	no
[Ref.: #120911]	indole ChEBI	no
[Ref.: #68368]	acetoin ChEBI	yes	* from API 20E
[Ref.: #68368]	hydrogen sulfide ChEBI	no	* from API 20E
[Ref.: #68368]	indole ChEBI	no	* from API 20E

	Metabolite	Voges-Proskauer-test	Methylred-test	Indole test
[Ref.: #120911]	acetoin ChEBI	-
[Ref.: #120911]	glucose ChEBI		-
[Ref.: #68368]	acetoin ChEBI	+			* from API 20E
[Ref.: #68368]	indole ChEBI			-	* from API 20E

	Enzyme	Enzyme activity	EC number
[Ref.: #43691]	acid phosphatase	+	3.1.3.2
[Ref.: #120911]	alcohol dehydrogenase	-	1.1.1.1
[Ref.: #43691]	alkaline phosphatase	+	3.1.3.1
[Ref.: #43691]	alpha-chymotrypsin	+	3.4.21.1
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #43691]	alpha-fucosidase	-	3.2.1.51
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #43691]	alpha-galactosidase	-	3.2.1.22
[Ref.: #68382]	alpha-galactosidase	-	3.2.1.22	* from API zym
[Ref.: #43691]	alpha-glucosidase	+	3.2.1.20
[Ref.: #68382]	alpha-glucosidase	+	3.2.1.20	* from API zym
[Ref.: #43691]	alpha-mannosidase	-	3.2.1.24
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #120911]	amylase	+
[Ref.: #68368]	arginine dihydrolase	+	3.5.3.6	* from API 20E
[Ref.: #43691]	beta-galactosidase	+/-	3.2.1.23
[Ref.: #120911]	beta-galactosidase	-	3.2.1.23
[Ref.: #68368]	beta-galactosidase	+	3.2.1.23	* from API 20E
[Ref.: #68382]	beta-galactosidase	-	3.2.1.23	* from API zym
[Ref.: #43691]	beta-glucosidase	+/-	3.2.1.21
[Ref.: #43691]	beta-glucuronidase	-	3.2.1.31
[Ref.: #68382]	beta-glucuronidase	-	3.2.1.31	* from API zym
[Ref.: #120911]	caseinase	-	3.4.21.50
[Ref.: #120911]	catalase	+	1.11.1.6
[Ref.: #43691]	cystine aminopeptidase	+	3.4.11.3
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #120911]	DNase	+
[Ref.: #43691]	esterase	+
[Ref.: #68382]	esterase (C 4)	+		* from API zym
[Ref.: #43691]	esterase Lipase (C 8)	+
[Ref.: #68382]	esterase lipase (C 8)	+		* from API zym
[Ref.: #120911]	gamma-glutamyltransferase	+	2.3.2.2
[Ref.: #120911]	gelatinase	+/-
[Ref.: #68368]	gelatinase	+		* from API 20E
[Ref.: #43691]	leucine aminopeptidase	+	3.4.1.1
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #43691]	lipase (C 14)	-
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #120911]	lysine decarboxylase	-	4.1.1.18
[Ref.: #68368]	lysine decarboxylase	+	4.1.1.18	* from API 20E
[Ref.: #43691]	N-acetyl-beta-glucosaminidase	+	3.2.1.52
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	+	3.2.1.52	* from API zym
[Ref.: #43691]	naphthol-AS-BI-phosphohydrolase	+
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #120911]	ornithine decarboxylase	-	4.1.1.17
[Ref.: #68368]	ornithine decarboxylase	+	4.1.1.17	* from API 20E
[Ref.: #120911]	oxidase	+
[Ref.: #120911]	phenylalanine ammonia-lyase	-	4.3.1.24
[Ref.: #43691]	phosphoamidase	+	3.9.1.1
[Ref.: #43691]	trypsin	+	3.4.21.4
[Ref.: #120911]	tryptophan deaminase	-
[Ref.: #68368]	tryptophan deaminase	-	4.1.99.1	* from API 20E
[Ref.: #120911]	tween esterase	-
[Ref.: #120911]	urease	-	3.5.1.5
[Ref.: #68368]	urease	-	3.5.1.5	* from API 20E
[Ref.: #43691]	valine aminopeptidase	+
	Only first 10 entries are displayed. Click here to see all.

API® 20E:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	beta-GalactosidaseONPG	Arginine dihydrolaseADH (Arg)	Lysine decarboxylaseLDC (Lys)	Ornithine decarboxylaseODC	Citrate utilizationCIT	H2S productionH2S	Urease/urea hydrolysisURE	Tryptophan deaminaseTDA (Trp)	Indole productionIND	Acetoin production (Voges Proskauer test)VP	Gelatinase/gelatin hydrolysisGEL	Fermentation/oxidation of D-glucoseGLU	Fermentation/oxidation of D-mannitolMAN	Fermentation/oxidation of inositolINO	Fermentation/oxidation of sorbitolSor	Fermentation/oxidation of L-rhamnoseRHA	Fermentation/oxidation of sucroseSAC	Fermentation/oxidation of melibioseMEL	Fermentation/oxidation of amygdalinAMY	Fermentation/oxidation of L-arabinoseARA	Cytochrome oxidaseOX	Nitrite productionNO2	Reduction to N2N2	MotilityMOB	Growth on MacConkey mediumMAC	Oxidative catabolisation of D-glucoseOF-O	Fermentation of D-glucoseOF-F
[Ref.: #19934]	542	+	+	+	+	+	-	-	-	-	+	+	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #19934]	742	not determinedn.d.	+	+	+	-	+	+	-	+	-	+	+	-	-	-	+	+	+	-	-
[Ref.: #120911]	8824	-	-	+	+	-	+	-	-	-	-	-	+	-	-	-	+	-	+	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #10718]	Sample type/isolated from	soil
[Ref.: #10718]	Country	USA
[Ref.: #10718]	Country ISO 3 Code	USA
[Ref.: #10718]	Continent	North America

[Ref.: #67770]	Sample type/isolated from	Soil
[Ref.: #67770]	Geographic location (country and/or sea, region)	Yamanashi Pref.
[Ref.: #67770]	Country	Japan
[Ref.: #67770]	Country ISO 3 Code	JPN
[Ref.: #67770]	Continent	Asia

[Ref.: #120911]	Sample type/isolated from	Environment, Soil
[Ref.: #120911]	Country	Japan
[Ref.: #120911]	Country ISO 3 Code	JPN
[Ref.: #120911]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental

#Terrestrial

#Soil

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AF002266 (>99% sequence identity) for Sphaerimonospora mesophila subclade from Microbeatlas

Aquatic Samples	2
Soil Samples	89
Animal Samples	4
Plant Samples	186
Total Samples	281

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #10718]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #19934]	Biosafety level	1	German classification
[Ref.: #120911]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #10718]	Thermomonospora mesouviformis 16S ribosomal RNA gene, partial sequence	AF002265	1468	GenBank ENA	53522 tax ID
[Ref.: #20218]	Microbispora mesophila gene for 16S ribosomal RNA, partial sequence	AB006170	1487	GenBank ENA	1226285 tax ID	*
[Ref.: #20218]	Microbispora mesophila gene for 16S ribosomal RNA, partial sequence, strain: JCM 3151	AB915628	1009	GenBank ENA	1226285 tax ID	*
[Ref.: #20218]	Microbispora mesophila gene for 16S ribosomal RNA, partial sequence, strain: JCM 3151	AB915630	938	GenBank ENA	1226285 tax ID	*
[Ref.: #20218]	Thermomonospora mesophila 16S ribosomal RNA gene, partial sequence	AF002266	1456	GenBank ENA	1226285 tax ID	*

Genome sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Sphaerimonospora mesophila NBRC 14179 = JCM 3151	GCA_001552515	contig	GenBank ENA	1226285 tax ID
[Ref.: #66792]	Sphaerimonospora mesophila NBRC 14179 = JCM 3151	GCA_001313685	contig	GenBank ENA	1226285 tax ID	*
[Ref.: #66792]	Microbispora mesophila NBRC 14179 = JCM 3151	1226285.5	wgs	PATRIC	1226285 tax ID	*
[Ref.: #66792]	Sphaerimonospora mesophila NBRC 14179 = JCM 3151	1226285.6	wgs	PATRIC	1226285 tax ID	*
[Ref.: #66792]	Sphaerimonospora mesophila NBRC 14179	2773857850	draft	JGI IMG/M	1226285 tax ID	*
[Ref.: #66792]	Sphaerimonospora mesophila JCM 3151	2734481958	draft	JGI IMG/M	1226285 tax ID	*

[Ref.: #10718]	GC-content	71.1 mol%	high performance liquid chromatography (HPLC)
[Ref.: #67770]	GC-content	70 mol%	genome sequence analysis

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Sphaerimonospora mesophila NBRC 14179 = JCM 3151 PATRIC: 1226285.6
[Ref.: #69481]	spore-forming	spore-formingⓘ	yes	90	no

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Microbispora mesophila NBRC 14179 = JCM 3151 PATRIC: 1226285.5
[Ref.: #69480]	gram-positive	gram-positiveⓘ	yes	87.987	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	94.36	yes
[Ref.: #69480]	spore-forming	spore-formingⓘ	yes	89.301	yes
[Ref.: #69480]	aerobic	aerobicⓘ	yes	87.908	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	85.263	yes
[Ref.: #69480]	flagellated	motile2+ⓘ	no	88	no

Availability in culture collections External links

[Ref.: #10718]

Culture collection no.

DSM 43048, ATCC 27303, JCM 3151, KCC A-0151, NBRC 14179, BCRC 12464, CBS 265.72, CIP 105593, HUT 6621, IFM 1287, IFO 14179, IMSNU 22109, KCTC 9241, NCIMB 11544, NRRL B-16986, PCM 2580, VKM Ac-1953, VTT E-89374, CCRC 12464

[Ref.: #85558]

SI-ID 92915

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Sphaerimonospora triticiradicis sp. nov., a novel actinomycete isolated from a root of wheat (Triticum aestivum L.).	Han C, Hu J, Zhao J, Tian Y, Jiang S, Guo X, Xiang W, Wang X	Antonie Van Leeuwenhoek	10.1007/s10482-018-1170-1	2018	*
Phylogeny	Proposal of Sphaerimonospora cavernae gen. nov., sp. nov. and transfer of Microbispora mesophila (Zhang et al., 1998) to Sphaerimonospora mesophila comb. nov. and Microbispora thailandensis (Duangmal et al., 2012) to Sphaerimonospora thailandensis comb. nov.	Mingma R, Duangmal K, Take A, Inahashi Y, O Mura S, Takahashi YK, Matsumoto A	Int J Syst Evol Microbiol	10.1099/ijsem.0.000935	2016	*

References

#10718

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 43048

#19934

Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig .

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#41795 ; Curators of the CIP;

#43691

Ratchanee Mingma, Kannika Duangmal, Akira Také, Yuki Inahashi, Satoshi Omura, Yoko Takahashi, Atsuko Matsumoto: Proposal of Sphaerimonospora cavernae gen. nov., sp. nov. and transfer of Microbispora mesophila (Zhang et al., 1998) to Sphaerimonospora mesophila comb. nov. and Microbispora thailandensis (Duangmal et al., 2012) to Sphaerimonospora thailandensis comb. nov.. IJSEM 66: 1735 - 1744 2016 ( DOI 10.1099/ijsem.0.000935 , PubMed 26822211 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68368

Automatically annotated from API 20E .

#68382

Automatically annotated from API zym .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#85558

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID92915.1 )

#120911 Collection of Institut Pasteur ; Curators of the CIP; CIP 105593
* These data were automatically processed and therefore are not curated

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Search for species Sphaerimonospora mesophila in external resources:
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Sphaerimonospora mesophila NBRC 14179 = JCM 3151

Microbispora mesophila NBRC 14179 = JCM 3151

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