Microbispora rosea subsp. aerata (DSM 43176, ATCC 15448, JCM 3076)

Name: Microbispora rosea subsp. aerata (DSM 43176, ATCC 15448, JCM 3076)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 16512

Type strain

Strain Designation P 132

Culture col. no. DSM 43176 ATCC 15448 JCM 3076 P 132 VKM Ac-1507 9 more

NCBI tax ID(s) 147065

Special Collections DSMZ JCM KCTC

History DSMZ <- P. Hirsch <- ATCC <- M.P. Lechevalier, P 132 (Waksmania rosea) JCM <-- KCC A-0076 <-- H. A. Lechevalier P-132.

Links

Microbispora rosea subsp. aerata P 132 is a bacterium that was isolated from soil.

genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 386960

MTCC 1546,ATCC 15448,JCM 3076,DSM 43176,CCRC 11655,IFO 12581,IFO 14624,KCTC 9309,VKM Ac-1507,NBRC 12581,NBRC 14624,BCRC 11655,IMET 9503

@ref 20215

Last LPSN update 2026-05-29 08:28:47

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Streptosporangiales

Family Streptosporangiaceae

Genus Microbispora

Species Microbispora rosea subsp. aerata

Full scientific name Microbispora rosea subsp. aerata (Gerber and Lechevalier 1964) Miyadoh et al. 1991

Synonyms (4)

Microbispora thermorosea
"Waksmania aerata"
Microbispora aerata
Microbispora thermodiastatica

BacDive ID	Other strains from **Microbispora rosea subsp. aerata** (3)	Type strain
16511	M. rosea subsp. aerata FYU M2-59, M2-59, FYU M₂-59, DSM ...
16513	M. rosea subsp. aerata M2-64, M₂-64, DSM 43840, ATCC ...
100155	M. rosea subsp. aerata STI09503(IMET), 496-604b, IMET 9503

Morphology

Cell morphology

@ref	Gram stain	Confidence
125439	positive	96.916
125438	positive	90.059

Multimedia

@ref:	10844
multimedia content:	DSM_43176.jpg
multimedia.multimedia content:	https://www.dsmz.de/microorganisms/photos/DSM_43176.jpg
caption:	Medium 65 37°C
intellectual property rights:	© Leibniz-Institut DSMZ
manual_annotation:	1

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
10844	Potato Carrot Agar (DSMZ Medium 1765)	Medium recipe provided by DSMZ
10844	GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)	Medium recipe at MediaDive	Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water
10844	ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)	Medium recipe at MediaDive	Name: ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84) Composition: Agar 20.0 g/l Rolled oats 20.0 g/l ZnSO4 x 7 H2O 0.001 g/l MnCl2 x 4 H2O 0.001 g/l FeSO4 x 7 H2O 0.001 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
10844	positive	growth	37
67770	positive	growth	37

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125439	obligate aerobe	99.302

Compound production

@ref	Compound
10844	iodinin
10844	phenazine
10844	phenoxazinones

Observation

67770

Observationquinones: MK-9, MK-9(H₂), MK-9(H₄)

Metabolite production

@ref	Chebi-ID	Metabolite	Production
67770	39201 ChEBI	phenazines

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Terrestrial	#Soil

Isolation

@ref	Sample type	Country	Country ISO 3 Code	Continent
10844	soil
67770	Soil	France	FRA	Europe

Taxonmaps

69479

Global distribution of 16S sequence U48984 (>99% sequence identity) for Microbispora from Microbeatlas

Aquatic Samples	17
Soil Samples	141
Animal Samples	14
Plant Samples	35
Total Samples	207

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
10844	1	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM1464783v1 assembly for Microbispora rosea subsp. aerata JCM 3076	scaffold	GCA_014647835	147065.3	3002158004	147065	21.57
66792	ASM1686307v1 assembly for Microbispora rosea subsp. aerata NBRC 14624	contig	GCA_016863075	147065.4		147065	15.77
124043	ASM2792188v1 assembly for Microbispora rosea subsp. aerata	scaffold	GCA_027921885	147065.5		147065	0

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
20218	Microbispora aerata 16S rRNA gene	U48984	1415		147065
124043	Microbispora rosea subsp. aerata strain JCM 3076 16S ribosomal RNA gene, partial sequence.	MT760396	1297		147065

GC content

@ref	GC-content (mol%)	Method
67770	72	thermal denaturation, midpoint method (Tm)
67770	67	thermal denaturation, midpoint method (Tm)
67770	70.8	high performance liquid chromatography (HPLC)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM1464783v1 assembly for Microbispora rosea subsp. aerata JCM 3076
NCBI: GCA_014647835

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	99.30	no
125439	gram_stain	BacteriaNetⓘ	positive	96.92	no
125439	motility	BacteriaNetⓘ	no	84.44	no
125439	spore_formation	BacteriaNetⓘ	yes	41.82	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Microbispora rosea subsp. aerata JCM 3076
NCBI: GCA_014647835.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	90.06	no
125438	anaerobic	anaerobicⓘ	no	92.94	no
125438	aerobic	aerobicⓘ	yes	88.41	no
125438	spore-forming	spore-formingⓘ	yes	85.37	no
125438	thermophilic	thermophileⓘ	no	89.15	no
125438	flagellated	motile2+ⓘ	no	86.00	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Distribution and phylogenetic analysis of family 19 chitinases in Actinobacteria.	Kawase T, Saito A, Sato T, Kanai R, Fujii T, Nikaidou N, Miyashita K, Watanabe T.	Appl Environ Microbiol	10.1128/aem.70.2.1135-1144.2004	2004
Phylogeny	A taxonomic review of the genus Microbispora and a proposal to transfer two species to the genus Actinomadura and to combine ten species into Microbispora rosea.	Miyadoh S, Amano S, Tohyama H, Shomura T	J Gen Microbiol	10.1099/00221287-136-9-1905	1990

References

#10844	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 43176
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Microbispora rosea subsp. aerata (DSM 43176, ATCC 15448, JCM 3076)

Name and taxonomic classification

Morphology

Cell morphology

Multimedia

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Compound production

Observation

Metabolite production

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_014647835

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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