Name: Microbispora rosea subsp. aerata P 132
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 16512

Type strain:

Species: Microbispora rosea subsp. aerata

Strain Designation: P 132

Culture col. no.: DSM 43176, ATCC 15448, JCM 3076, BCRC 11655, CGMCC 4.5565, IFO 12581, IFO 14624, IMSNU 20073, KCTC 9309, MTCC 1546, NBRC 12581, NBRC 14624, VKM Ac-1507

Strain history: KCC A-0076 <-- H. A. Lechevalier P-132.

NCBI tax ID(s): 147065 (subspecies)

SI-ID 386960

ATCC 15448, JCM 3076, DSM 43176, CCRC 11655, IFO 12581, IFO 14624, KCTC 9309, VKM Ac-1507, NBRC 12581, NBRC 14624, BCRC 11655, IMET 9503

Other strains from Microbispora rosea subsp. aerata

M. rosea subsp. aerata FYU M2-59, M2-59, FYU M₂-59, ...
M. rosea subsp. aerata M2-64, M₂-64, DSM 43840, ...

Section

Microbispora rosea subsp. aerata P 132 is a spore-forming, mesophilic, Gram-positive bacterium that was isolated from soil.

Gram-positive
spore-forming
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Streptosporangiales*
	Family	*Streptosporangiaceae*
	Genus	*Microbispora*
	Species	**Microbispora rosea subsp. aerata**
	Full Scientific Name (LPSN)	Microbispora rosea subsp. aerata (Gerber and Lechevalier 1964) Miyadoh et al. 1991

	Synonym	Microbispora aerata
	Synonym	"Waksmania* aerata"*
	Synonym	Microbispora thermorosea
	Synonym	Microbispora thermodiastatica

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	positive Confidence in %100

Multimedia content

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Caption:

Medium 65 37°C

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Intellectual property rights:

Information on culture and growth conditions Culture and growth conditions

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Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

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Culture medium growth

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Culture medium link

Medium recipe at MediaDive

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Culture medium composition

expand / minimize

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Culture medium

ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)

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Culture medium growth

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Culture medium link

Medium recipe at MediaDive

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Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #10844]			growth	37 °C
[Ref.: #67770]			growth	37 °C

[Ref.: #10844]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69481]	Ability of spore formation	yes Confidence in %95
[Ref.: #69480]	Ability of spore formation	yes Confidence in %100

[Ref.: #10844]	Name of produced compound	iodinin
[Ref.: #10844]	Name of produced compound	phenazine
[Ref.: #10844]	Name of produced compound	phenoxazinones

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Observation

quinones: MK-9, MK-9(H₂), MK-9(H₄)

	Metabolite production	Metabolite	Production
[Ref.: #67770]		phenazines ChEBI	yes

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #10844]	Sample type/isolated from	soil

[Ref.: #67770]	Sample type/isolated from	Soil
[Ref.: #67770]	Country	France
[Ref.: #67770]	Country ISO 3 Code	FRA
[Ref.: #67770]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Environmental

#Terrestrial

#Soil

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence U48984 (>99% sequence identity) for Microbispora from Microbeatlas

Aquatic Samples	17
Soil Samples	141
Animal Samples	14
Plant Samples	35
Total Samples	207

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

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Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Microbispora aerata 16S rRNA gene	U48984	1415	ENA	147065 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Microbispora rosea subsp. aerata JCM 3076	GCA_014647835	scaffold	GenBank	147065 tax ID	*
[Ref.: #66792]	Microbispora rosea subsp. aerata NBRC 14624	GCA_016863075	contig	GenBank	147065 tax ID	*
[Ref.: #66792]	Microbispora rosea subsp. aerata strain JCM 3076	147065.3	wgs	PATRIC	147065 tax ID	*
[Ref.: #66792]	Microbispora rosea subsp. aerata strain NBRC 14624	147065.4	wgs	PATRIC	147065 tax ID	*

[Ref.: #67770]	GC-content	72 mol%	thermal denaturation, midpoint method (Tm)
[Ref.: #67770]	GC-content	67 mol%	thermal denaturation, midpoint method (Tm)
[Ref.: #67770]	GC-content	70.8 mol%	high performance liquid chromatography (HPLC)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Microbispora rosea subsp. aerata JCM 3076 NCBI: GCA_014647835.1
[Ref.: #69481]	spore-forming	yes	95	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Microbispora rosea subsp. aerata JCM 3076 NCBI: GCA_014647835.1
[Ref.: #69480]	flagellated	no	98.003	no
[Ref.: #69480]	gram-positive	yes	90.259	no
[Ref.: #69480]	anaerobic	no	99.118	no
[Ref.: #69480]	aerobic	yes	90.089	no
[Ref.: #69480]	halophile	no	91.927	no
[Ref.: #69480]	spore-forming	yes	93.468	no
[Ref.: #69480]	thermophile	no	93.309	yes
[Ref.: #69480]	glucose-util	yes	90.145	no
[Ref.: #69480]	motile	no	92.979	no
[Ref.: #69480]	glucose-ferment	no	93.141	no

Availability in culture collections External links

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Culture collection no.

DSM 43176, ATCC 15448, JCM 3076, BCRC 11655, CGMCC 4.5565, IFO 12581, IFO 14624, IMSNU 20073, KCTC 9309, MTCC 1546, NBRC 12581, NBRC 14624, VKM Ac-1507

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SI-ID 386960

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	A taxonomic review of the genus Microbispora and a proposal to transfer two species to the genus Actinomadura and to combine ten species into Microbispora rosea.	Miyadoh S, Amano S, Tohyama H, Shomura T	J Gen Microbiol	10.1099/00221287-136-9-1905	1990	*

References

#10844

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 43176

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#85545

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID386960.1 )

* These data were automatically processed and therefore are not curated

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Microbispora rosea subsp. aerata JCM 3076

Microbispora rosea subsp. aerata JCM 3076

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