Streptomyces sundarbansensis (DSM 42019, MTCC 10621, MS1/7)

Name: Streptomyces sundarbansensis (DSM 42019, MTCC 10621, MS1/7)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 16486

Type strain

Strain Designation MS1/7

Culture col. no. DSM 42019 MTCC 10621 MS1/7 JCM 19250

NCBI tax ID(s) 265730

Special Collections DSMZ JCM Wink compendium

History DSMZ <- J. Mukherjee, Jadavpur Univ., Kolkata, India; MTCC 5272 <- M. Saha JCM <-- MTCC 10621 <-- M. Arumugam et al. MS1/7.

Links

Streptomyces sundarbansensis MS1/7 is a bacterium that builds an aerial mycelium and was isolated from mangrove forest soil.

16S sequence Bacteria

Name and taxonomic classification

SI-ID 397923

JCM 19250,DSM 42019

@ref 20215

Last LPSN update 2026-05-29 08:28:47

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Kitasatosporales

Family Streptomycetaceae

Genus Streptomyces

Species Streptomyces sundarbansensis

Full scientific name Streptomyces sundarbansensis Arumugam et al. 2011

Morphology

Colony morphology

@ref	Colony color	Medium used
69322	Colourless	ISP 6
69322	Brown beige (1011)	ISP 5
69322	Grey white (9002)	suter without tyrosine
69322	Ivory (1014)	ISP 2
69322	Olive brown (8008)	ISP 7
69322	Terra brown (8028)	ISP 4

Multicellular morphology

@ref	Complex name	Complex color	Medium name
69322	Aerial mycelium	Ivory (1014)	ISP 2
69322	Aerial mycelium	Oyster white (1013)	ISP 3
69322	Aerial mycelium	Cream (9001)	ISP 4
69322	Aerial mycelium	Stone grey (7030)	ISP 5
69322	Aerial mycelium		ISP 6
69322	Aerial mycelium	Telegrey 4 (7047)	ISP 7
69322	Aerial mycelium	Traffic white (9016)	suter with tyrosine
69322	Aerial mycelium	Silk grey (7044)	suter without tyrosine

Pigmentation

@ref	Production	Color	Name
69322			melanin pigment
69322		Ivory (1014), light ivory (1015)	soluble pigment

Multimedia

@ref:	69322
multimedia content:	DSM_42019_image3.jpeg
multimedia.multimedia content:	DSM_42019_image3.jpeg
caption:	Plates (65, ISP2, ISP3, ISP4, ISP5, ISP7)
intellectual property rights:	Helmholtz-Zentrum für Infektionsforschung GmbH
manual_annotation:	1

@ref:	69322
multimedia content:	DSM_42019_image4.jpeg
multimedia.multimedia content:	DSM_42019_image4.jpeg
caption:	Plates (65, ISP2, ISP3, ISP4, ISP5, ISP7)
intellectual property rights:	Helmholtz-Zentrum für Infektionsforschung GmbH
manual_annotation:	1

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
17336	ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)		Medium recipe at MediaDive	Name: ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84) Composition: Agar 20.0 g/l Rolled oats 20.0 g/l ZnSO4 x 7 H2O 0.001 g/l MnCl2 x 4 H2O 0.001 g/l FeSO4 x 7 H2O 0.001 g/l Distilled water
17336	GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)		Medium recipe at MediaDive	Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
17336	positive	growth	28
67770	positive	growth	28

Physiology and metabolism

Compound production

17336

Compound2 allyloxyphenol

Halophily

@ref	Salt	Growth	Tested relation	Concentration
69322	NaCl	positive	growth	0-10 %

Observation

67770

Observationquinones: MK-9(H₆), MK-9(H₈)

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
69322	22599 ChEBI	arabinose	-	growth
69322	62968 ChEBI	cellulose	-	growth
68379	17634 ChEBI	D-glucose	-	fermentation	from API Coryne
68379	16899 ChEBI	D-mannitol	-	fermentation	from API Coryne
68379	16988 ChEBI	D-ribose	-	fermentation	from API Coryne
68379	65327 ChEBI	D-xylose	-	fermentation	from API Coryne
68379	4853 ChEBI	esculin	+	hydrolysis	from API Coryne
69322	28757 ChEBI	fructose	+/-	growth
68379	5291 ChEBI	gelatin	+	hydrolysis	from API Coryne
69322	17234 ChEBI	glucose	+	growth
68379	28087 ChEBI	glycogen	-	fermentation	from API Coryne
68379	17716 ChEBI	lactose	-	fermentation	from API Coryne
68379	17306 ChEBI	maltose	-	fermentation	from API Coryne
69322	37684 ChEBI	mannose	+	growth
69322	17268 ChEBI	myo-inositol	-	growth
68379	17632 ChEBI	nitrate	-	reduction	from API Coryne
69322	16634 ChEBI	raffinose	-	growth
69322	26546 ChEBI	rhamnose	-	growth
68379	17992 ChEBI	sucrose	-	fermentation	from API Coryne
69322	17992 ChEBI	sucrose	-	growth
68379	16199 ChEBI	urea	+	hydrolysis	from API Coryne
69322	18222 ChEBI	xylose	+	growth

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68379	alkaline phosphatase	+	3.1.3.1	from API Coryne
68382	alpha-chymotrypsin	+	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68379	alpha-glucosidase	+	3.2.1.20	from API Coryne
68382	alpha-mannosidase	-	3.2.1.24	from API zym
68379	beta-galactosidase	-	3.2.1.23	from API Coryne
68382	beta-glucosidase	-	3.2.1.21	from API zym
68379	beta-glucosidase	+	3.2.1.21	from API Coryne
68382	beta-glucuronidase	-	3.2.1.31	from API zym
68379	beta-glucuronidase	-	3.2.1.31	from API Coryne
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
68379	gelatinase	+		from API Coryne
68382	leucine arylamidase	+	3.4.11.1	from API zym
68382	lipase (C 14)	-		from API zym
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68379	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API Coryne
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
68379	pyrazinamidase	-	3.5.1.B15	from API Coryne
68379	pyrrolidonyl arylamidase	-	3.4.19.3	from API Coryne
68382	trypsin	+	3.4.21.4	from API zym
68379	urease	+	3.5.1.5	from API Coryne

API coryne

@ref	Reduction of nitrateNIT	PYZ	PYRA	PAL	beta GUR	beta GAL	alpha GLU	beta NAG	ESC	URE	GEL	Control fermentationControl	GLU	RIB	XYL	MAN	MAL	LAC	SAC	GLYG	CAT
69322	-	-	-	+	-	-	+	-	+	+	+	not determinedn.d.	-	-	-	-	-	-	-	-	not determinedn.d.

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
69322	not determinedn.d.	+	+	+	-	+	+/-	+/-	+	+	+	+	-	+/-	-	+/-	-	-	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Aquatic	#Mangrove
#Environmental	#Terrestrial	#Forest
#Environmental	#Terrestrial	#Soil

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent	Latitude	Longitude
17336	mangrove forest soil	Bay of Bengal, Lothian Island of the Sundarbans mangrove forest (20° 50' N 88°19' E)	India	IND	Asia	20.8333	88.3167 20.8333/88.3167
67770	Sediments of the Sundarbans mangrove forest		India	IND	Asia

Taxonmaps

69479

Global distribution of 16S sequence AY550275 (>99% sequence identity) for Streptomyces from Microbeatlas

Aquatic Samples	286
Soil Samples	2441
Animal Samples	1009
Plant Samples	294
Total Samples	4030

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
17336	1	Risk group (German classification) According to TRBA 466

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
17336	Streptomyces sundarbansensis strain MS1/7 16S ribosomal RNA gene, partial sequence	AY550275	1490		265730

GC content

@ref	GC-content (mol%)	Method
17336	71.9	thermal denaturation, midpoint method (Tm)

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Streptomyces sundarbansensis sp. nov., an actinomycete that produces 2-allyloxyphenol.	Arumugam M, Mitra A, Pramanik A, Saha M, Gachhui R, Mukherjee J	Int J Syst Evol Microbiol	10.1099/ijs.0.028258-0	2010

References

#17336	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 42019
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68379	Automatically annotated from API Coryne .
#68382	Automatically annotated from API zym .
#69322	Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Streptomyces sundarbansensis (DSM 42019, MTCC 10621, MS1/7)

Name and taxonomic classification

Morphology

Colony morphology

Multicellular morphology

Pigmentation

Multimedia

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Compound production

Halophily

Observation

Metabolite utilization

Enzymes

API coryne

API zym

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

16S sequences

GC content

Genome-based predictions

Literature

Literature

References

BacDive

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