Name: Streptomyces sundarbansensis MS1/7
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 16486

Type strain:

Species: Streptomyces sundarbansensis

Strain Designation: MS1/7

Culture col. no.: DSM 42019, MTCC 10621, JCM 19250

Strain history: MTCC 10621 <-- M. Arumugam et al. MS1/7.

NCBI tax ID(s): 265730 (species)

SI-ID 397923

DSM 42019

Section

Streptomyces sundarbansensis MS1/7 is a mesophilic bacterium that builds an aerial mycelium and was isolated from mangrove forest soil.

mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Kitasatosporales*
	Family	*Streptomycetaceae*
	Genus	*Streptomyces*
	Species	**Streptomyces sundarbansensis**
	Full Scientific Name (LPSN)	Streptomyces sundarbansensis Arumugam et al. 2011

Information on morphological and physiological properties Morphology

[Ref.: #69322]	Colony color	Colourless
[Ref.: #69322]	Cultivation medium used	ISP 6

[Ref.: #69322]	Colony color	Brown beige (1011)
[Ref.: #69322]	Cultivation medium used	ISP 5

[Ref.: #69322]	Colony color	Grey white (9002)
[Ref.: #69322]	Cultivation medium used	suter without tyrosine

[Ref.: #69322]	Colony color	Ivory (1014)
[Ref.: #69322]	Cultivation medium used	ISP 2

[Ref.: #69322]	Colony color	Olive brown (8008)
[Ref.: #69322]	Cultivation medium used	ISP 7

[Ref.: #69322]	Colony color	Terra brown (8028)
[Ref.: #69322]	Cultivation medium used	ISP 4

[Ref.: #69322]	Pigment production	no
[Ref.: #69322]	Pigment name	Melanin
[Ref.: #69322]	Pigment production	yes
[Ref.: #69322]	Pigmentation color	Ivory (1014), light ivory (1015)
[Ref.: #69322]	Pigment name	soluble pigment

[Ref.: #69322]	Multicellular complex forming ability	yes
[Ref.: #69322]	Multicellular complex name	Aerial mycelium
[Ref.: #69322]	Multicellular complex color	Ivory (1014)
[Ref.: #69322]	Medium Name (multicellularity)	ISP 2

[Ref.: #69322]	Multicellular complex forming ability	yes
[Ref.: #69322]	Multicellular complex name	Aerial mycelium
[Ref.: #69322]	Multicellular complex color	Oyster white (1013)
[Ref.: #69322]	Medium Name (multicellularity)	ISP 3

[Ref.: #69322]	Multicellular complex forming ability	yes
[Ref.: #69322]	Multicellular complex name	Aerial mycelium
[Ref.: #69322]	Multicellular complex color	Cream (9001)
[Ref.: #69322]	Medium Name (multicellularity)	ISP 4

[Ref.: #69322]	Multicellular complex forming ability	yes
[Ref.: #69322]	Multicellular complex name	Aerial mycelium
[Ref.: #69322]	Multicellular complex color	Stone grey (7030)
[Ref.: #69322]	Medium Name (multicellularity)	ISP 5

[Ref.: #69322]	Multicellular complex forming ability	yes
[Ref.: #69322]	Multicellular complex name	Aerial mycelium
[Ref.: #69322]	Medium Name (multicellularity)	ISP 6

[Ref.: #69322]	Multicellular complex forming ability	yes
[Ref.: #69322]	Multicellular complex name	Aerial mycelium
[Ref.: #69322]	Multicellular complex color	Telegrey 4 (7047)
[Ref.: #69322]	Medium Name (multicellularity)	ISP 7

[Ref.: #69322]	Multicellular complex forming ability	yes
[Ref.: #69322]	Multicellular complex name	Aerial mycelium
[Ref.: #69322]	Multicellular complex color	Traffic white (9016)
[Ref.: #69322]	Medium Name (multicellularity)	suter with tyrosine

[Ref.: #69322]	Multicellular complex forming ability	yes
[Ref.: #69322]	Multicellular complex name	Aerial mycelium
[Ref.: #69322]	Multicellular complex color	Silk grey (7044)
[Ref.: #69322]	Medium Name (multicellularity)	suter without tyrosine

Multimedia content

[Ref.: #69322]

Caption:

Plates (65, ISP2, ISP3, ISP4, ISP5, ISP7)

[Ref.: #69322]

Intellectual property rights:

Helmholtz-Zentrum für Infektionsforschung GmbH

[Ref.: #69322]

Caption:

Plates (65, ISP2, ISP3, ISP4, ISP5, ISP7)

[Ref.: #69322]

Intellectual property rights:

Helmholtz-Zentrum für Infektionsforschung GmbH

Information on culture and growth conditions Culture and growth conditions

[Ref.: #17336]

Culture medium

ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)

[Ref.: #17336]

Culture medium growth

[Ref.: #17336]

Culture medium link

Medium recipe at MediaDive

[Ref.: #17336]

Culture medium composition

expand / minimize

[Ref.: #17336]

Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

[Ref.: #17336]

Culture medium growth

[Ref.: #17336]

Culture medium link

Medium recipe at MediaDive

[Ref.: #17336]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #17336]			growth	28 °C
[Ref.: #67770]			growth	28 °C

[Ref.: #17336]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #17336]

Name of produced compound

2 allyloxyphenol

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #69322]		NaCl		growth	0-10	%

[Ref.: #67770]

Observation

quinones: MK-9(H₆), MK-9(H₈)

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #69322]	arabinose ChEBI	-	growth
[Ref.: #69322]	cellulose ChEBI	-	growth
[Ref.: #68379]	D-glucose ChEBI	-	fermentation	* from API Coryne
[Ref.: #68379]	D-mannitol ChEBI	-	fermentation	* from API Coryne
[Ref.: #68379]	D-ribose ChEBI	-	fermentation	* from API Coryne
[Ref.: #68379]	D-xylose ChEBI	-	fermentation	* from API Coryne
[Ref.: #68379]	esculin ChEBI	+	hydrolysis	* from API Coryne
[Ref.: #69322]	fructose ChEBI	+/-	growth
[Ref.: #68379]	gelatin ChEBI	+	hydrolysis	* from API Coryne
[Ref.: #69322]	glucose ChEBI	+	growth
[Ref.: #68379]	glycogen ChEBI	-	fermentation	* from API Coryne
[Ref.: #69322]	inositol ChEBI	-	growth
[Ref.: #68379]	lactose ChEBI	-	fermentation	* from API Coryne
[Ref.: #68379]	maltose ChEBI	-	fermentation	* from API Coryne
[Ref.: #69322]	mannose ChEBI	+	growth
[Ref.: #68379]	nitrate ChEBI	-	reduction	* from API Coryne
[Ref.: #69322]	raffinose ChEBI	-	growth
[Ref.: #69322]	rhamnose ChEBI	-	growth
[Ref.: #69322]	sucrose ChEBI	-	growth
[Ref.: #68379]	sucrose ChEBI	-	fermentation	* from API Coryne
[Ref.: #68379]	urea ChEBI	+	hydrolysis	* from API Coryne
[Ref.: #69322]	xylose ChEBI	+	growth
	Only first 10 entries are displayed. Click here to see all.

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #68379]	alkaline phosphatase	+	3.1.3.1	* from API Coryne, API zym
[Ref.: #68382]	alpha-chymotrypsin	+	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	-	3.2.1.22	* from API zym
[Ref.: #68379]	alpha-glucosidase	+	3.2.1.20	* from API Coryne
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #68379]	beta-galactosidase	-	3.2.1.23	* from API Coryne
[Ref.: #68379]	beta-glucosidase	+	3.2.1.21	* from API Coryne
[Ref.: #68382]	beta-glucosidase	-	3.2.1.21	* from API zym
[Ref.: #68379]	beta-glucuronidase	-	3.2.1.31	* from API Coryne, API zym
[Ref.: #68382]	esterase (C 4)	+		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	+		* from API zym
[Ref.: #68379]	gelatinase	+		* from API Coryne
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #68379]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API Coryne, API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #68379]	pyrazinamidase	-	3.5.1.B15	* from API Coryne
[Ref.: #68379]	pyrrolidonyl arylamidase	-	3.4.19.3	* from API Coryne
[Ref.: #68382]	trypsin	+	3.4.21.4	* from API zym
[Ref.: #68379]	urease	+	3.5.1.5	* from API Coryne
	Only first 10 entries are displayed. Click here to see all.

API® Coryne:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Reduction of nitrateNIT	PyrazinamidasePYZ	Pyrrolidonyl arylamidasePYRA	Alkaline phosphatasePAL	beta-Glucuronidasebeta GUR	beta-Galactosidasebeta GAL	alpha-Glucosidasealpha GLU	N-Acetyl-beta-Glucosidasebeta NAG	Esculin hydrolysis/beta-GlucosidaseESC	Urease/urea hydrolysisURE	Gelatinase/gelatin hydrolysisGEL	Control fermentationControl	Fermentation of D-glucoseGLU	Fermentation of D-riboseRIB	Fermentation of D-xyloseXYL	Fermentation of D-mannitolMAN	Fermentation of maltoseMAL	Fermentation of lactoseLAC	Fermentation of sucroseSAC	Fermentation of glycogenGLYG	CatalaseCAT
[Ref.: #69322]	3815	-	-	-	+	-	-	+	-	+	+	+	not determinedn.d.	-	-	-	-	-	-	-	-	not determinedn.d.

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #69322]	5999	not determinedn.d.	+	+	+	-	+	+/-	+/-	+	+	+	+	-	+/-	-	+/-	-	-	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #17336]	Sample type/isolated from	mangrove forest soil
[Ref.: #17336]	Geographic location (country and/or sea, region)	Bay of Bengal, Lothian Island of the Sundarbans mangrove forest (20° 50' N 88°19' E)
[Ref.: #17336]	Country	India
[Ref.: #17336]	Country ISO 3 Code	IND
[Ref.: #17336]	Continent	Asia
[Ref.: #17336]	Geographic location	20.8333°/88.3167°

[Ref.: #67770]	Sample type/isolated from	Sediments of the Sundarbans mangrove forest
[Ref.: #67770]	Country	India
[Ref.: #67770]	Country ISO 3 Code	IND
[Ref.: #67770]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Mangrove
#Environmental	#Terrestrial	#Forest
#Environmental	#Terrestrial	#Soil

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AY550275 (>99% sequence identity) for Streptomyces from Microbeatlas

Aquatic Samples	286
Soil Samples	2441
Animal Samples	1009
Plant Samples	294
Total Samples	4030

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #17336]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #17336]	Streptomyces sundarbansensis strain MS1/7 16S ribosomal RNA gene, partial sequence	AY550275	1490	ENA	265730 tax ID

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GC-content

71.9 mol%

thermal denaturation, midpoint method (Tm)

Availability in culture collections External links

[Ref.: #17336]

Culture collection no.

DSM 42019, MTCC 10621, JCM 19250

[Ref.: #85520]

SI-ID 397923

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Streptomyces sundarbansensis sp. nov., an actinomycete that produces 2-allyloxyphenol.	Arumugam M, Mitra A, Pramanik A, Saha M, Gachhui R, Mukherjee J	Int J Syst Evol Microbiol	10.1099/ijs.0.028258-0	2010	*

References

#17336

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 42019

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68379

Automatically annotated from API Coryne .

#68382

Automatically annotated from API zym .

#69322

Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#85520

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID397923.1 )

* These data were automatically processed and therefore are not curated

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