Name: Vibrio fluvialis JCM 3749
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 164811

Type strain:

Species: Vibrio fluvialis

Culture col. no.: JCM 3749

Strain history: T. Shimada 950-82.

NCBI tax ID(s): 676 (species)

SI-ID 64162

JCM 3749

Other strains from Vibrio fluvialis

Section

Vibrio fluvialis JCM 3749 is a mesophilic bacterium of the family Vibrionaceae.

mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	"Vibrionales"
	Family	*Vibrionaceae*
	Genus	*Vibrio*
	Species	**Vibrio fluvialis**
	Full Scientific Name (LPSN)	Vibrio fluvialis Lee et al. 1981

Synonym

Allomonas enterica

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	37 °C

[Ref.: #67770]

Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #69479]

Global distribution of 16S sequence LC420092 (>99% sequence identity) for Vibrio from Microbeatlas

Aquatic Samples	1720
Soil Samples	168
Animal Samples	1806
Plant Samples	124
Total Samples	3818

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Vibrio fluvialis JCM 3749 gene for 16S ribosomal RNA, partial sequence	LC420092	1475	ENA	676 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Vibrio fluvialis JCM3749	GCA_021394915	scaffold	GenBank	676 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Vibrio fluvialis JCM3749 NCBI: GCA_021394915.1
[Ref.: #69480]	flagellated	yes	89.366	no
[Ref.: #69480]	gram-positive	no	98.918	no
[Ref.: #69480]	anaerobic	no	97.799	no
[Ref.: #69480]	aerobic	yes	85.536	no
[Ref.: #69480]	halophile	yes	55.085	no
[Ref.: #69480]	spore-forming	no	95.369	no
[Ref.: #69480]	motile	yes	91.495	no
[Ref.: #69480]	glucose-ferment	yes	88.095	no
[Ref.: #69480]	thermophile	no	99.349	yes
[Ref.: #69480]	glucose-util	yes	92.009	no

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 3749

[Ref.: #114241]

SI-ID 64162

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#114241

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID64162.1 )

* These data were automatically processed and therefore are not curated

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Vibrio fluvialis JCM3749

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