Name: Streptomyces hyderabadensis FH 8121
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 16476

Type strain:

Species: Streptomyces hyderabadensis

Strain Designation: FH 8121, OU-40

Culture col. no.: DSM 42074, CCTCC AA 209024, JCM 17657, PCM 2692

Strain history: PCM 2692 <-- T. V. K. Reddy OU-40.

NCBI tax ID(s): 598549 (species)

Special Collections

Section

When using BacDive for research please cite our paper

Streptomyces hyderabadensis FH 8121 is an aerobe, spore-forming, Gram-positive bacterium that was isolated from farm soil.

Gram-positive
ovoid-shaped
spore-forming
aerobe
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	09-12-2024 (DD-MM-YYYY)
	Domain	*Bacteria*
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Kitasatosporales*
	Family	*Streptomycetaceae*
	Genus	*Streptomyces*
	Species	**Streptomyces hyderabadensis**
	Full Scientific Name (LPSN)	Streptomyces hyderabadensis Reddy et al. 2011

Information on morphological and physiological properties Morphology

[Ref.: #29768]	Gram stain	positive

[Ref.: #29768]	Cell shape	ovoid-shaped

[Ref.: #29768]

Pigment production

yes

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #29768]			growth	20-37 °C
[Ref.: #67770]			growth	28 °C

	pH	Kind of pH		pH
[Ref.: #29768]			growth	06-11

Information on physiology and metabolism Physiology and metabolism

[Ref.: #29768]	Oxygen tolerance	aerobe
[Ref.: #125438]	Oxygen tolerance	aerobe Confidence in %90.297

[Ref.: #29768]	Ability of spore formation	yes
[Ref.: #125438]	Ability of spore formation	yes Confidence in %92.648

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #29768]		NaCl		growth	0-5	%

[Ref.: #29768]	Observation	aggregates in chains
[Ref.: #67770]	Observation	quinones: MK-9(H₆), MK-9(H₈), MK-9(H₄)

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #29768]	arabinose ChEBI	+	carbon source
[Ref.: #29768]	cellobiose ChEBI	+	carbon source
[Ref.: #29768]	galactose ChEBI	+	carbon source
[Ref.: #29768]	glucose ChEBI	+	carbon source
[Ref.: #29768]	glycine ChEBI	+	carbon source
[Ref.: #29768]	histidine ChEBI	+	carbon source
[Ref.: #29768]	lactose ChEBI	+	carbon source
[Ref.: #29768]	maltose ChEBI	+	carbon source
[Ref.: #29768]	mannitol ChEBI	+	carbon source
[Ref.: #29768]	mannose ChEBI	+	carbon source
[Ref.: #29768]	phenylalanine ChEBI	+	carbon source
[Ref.: #29768]	proline ChEBI	+	carbon source
[Ref.: #29768]	raffinose ChEBI	+	carbon source
[Ref.: #29768]	ribose ChEBI	+	carbon source
[Ref.: #29768]	sucrose ChEBI	+	carbon source
[Ref.: #29768]	trehalose ChEBI	+	carbon source
[Ref.: #29768]	xylose ChEBI	+	carbon source
	Only first 10 entries are displayed. Click here to see all.

	Enzymes	Enzyme	Enzyme activity	EC number
[Ref.: #29768]		gelatinase	+
[Ref.: #29768]		urease	+	3.5.1.5

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #18155]	Sample type/isolated from	farm soil
[Ref.: #18155]	Geographic location (country and/or sea, region)	Andhra Pradesh, Hyderabad region
[Ref.: #18155]	Country	India
[Ref.: #18155]	Country ISO 3 Code	IND
[Ref.: #18155]	Continent	Asia

[Ref.: #67770]	Sample type/isolated from	Farm soil from the Hyderabad region of Andhra Pradesh
[Ref.: #67770]	Geographic location (country and/or sea, region)	southern India
[Ref.: #67770]	Country	India
[Ref.: #67770]	Country ISO 3 Code	IND
[Ref.: #67770]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental	#Terrestrial	#Soil
#Engineered	#Agriculture	#Field
#Engineered	#Food production	#Aquaculture

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #18155]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #18155]	Streptomyces hyderabadensis partial 16S rRNA gene, strain OU-40	FM998652	1402	GenBank ENA	598549 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Streptomyces hyderabadensis JCM 17657	GCA_020404845	contig	GenBank ENA	598549 tax ID	*

[Ref.: #18155]	GC-content	70.2 mol%	thermal denaturation, midpoint method (Tm)
[Ref.: #29768]	GC-content	70.2 mol%

Data predicted using genome information as a basis Genome-based predictions

	Model	Trait	Prediction	Confidence in %	In training data
	Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Streptomyces hyderabadensis JCM 17657 NCBI: GCA_020404845.1
[Ref.: #125438]	gram-positive	gram-positiveⓘ	yes	88.251	no
[Ref.: #125438]	anaerobic	anaerobicⓘ	no	98.896	yes
[Ref.: #125438]	aerobic	aerobicⓘ	yes	90.297	yes
[Ref.: #125438]	spore-forming	spore-formingⓘ	yes	92.648	yes
[Ref.: #125438]	thermophile	thermophilicⓘ	no	96	yes
[Ref.: #125438]	motile2+	flagellatedⓘ	no	87.5	no

Availability in culture collections External links

[Ref.: #18155]

Culture collection no.

DSM 42074, CCTCC AA 209024, JCM 17657, PCM 2692

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Streptomyces leeuwenhoekii sp. nov., the producer of chaxalactins and chaxamycins, forms a distinct branch in Streptomyces gene trees.	Busarakam K, Bull AT, Girard G, Labeda DP, van Wezel GP, Goodfellow M	Antonie Van Leeuwenhoek	10.1007/s10482-014-0139-y	2014	*
Phylogeny	Streptomyces hyderabadensis sp. nov., an actinomycete isolated from soil.	Reddy TVK, Mahmood S, Paris L, Reddy YHK, Wellington EMH, Idris MM	Int J Syst Evol Microbiol	10.1099/ijs.0.020446-0	2010	*

References

#18155

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 42074

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#29768

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #26148 (see below)

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#125438

Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )

#26148

IJSEM 76 2011 ( DOI 10.1099/ijs.0.020446-0 , PubMed 20154329 )

* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Streptomyces hyderabadensis in external resources:
SILVA
BRENDA
PANGAEA
GBIF

Streptomyces hyderabadensis JCM 17657

Change proposal

Change proposal