Streptomyces hyderabadensis (DSM 42074, CCTCC AA 209024, JCM 17657)

Name: Streptomyces hyderabadensis (DSM 42074, CCTCC AA 209024, JCM 17657)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 16476

Type strain

Strain Designation FH 8121, OU-40

Culture col. no. DSM 42074 CCTCC AA 209024 JCM 17657 PCM 2692 FH 8121 1 more

NCBI tax ID(s) 598549

Special Collections DSMZ JCM Literature strains

History DSMZ <- J. Wink, Sanofi-Aventis Deutschland GmbH; FH 8121 <- JCM <- PCM; PCM 2692 <- T.V.K. Reddy; OU-40 JCM <-- PCM 2692 <-- T. V. K. Reddy OU-40.

Links

Streptomyces hyderabadensis FH 8121 is an aerobe, spore-forming, Gram-positive bacterium that was isolated from farm soil.

spore-forming Gram-positive ovoid-shaped aerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 132951

JCM 17657

@ref 20215

Last LPSN update 2026-05-29 08:28:47

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Kitasatosporales

Family Streptomycetaceae

Genus Streptomyces

Species Streptomyces hyderabadensis

Full scientific name Streptomyces hyderabadensis Reddy et al. 2011

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Confidence
29768	positive	ovoid-shaped
125439	positive		99.482
125439			94.802

Pigmentation

29768

Productionyes

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)
29768	positive	growth	20-37
67770	positive	growth	28

Culture pH

@ref	Ability	Type	PH	PH range
29768	positive	growth	06-11	alkaliphile

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
29768	aerobe
125438	aerobe	90.297
125439	obligate aerobe	98.463

Spore formation

@ref	Spore formation	Confidence
29768
125438		92.648

Halophily

@ref	Salt	Growth	Tested relation	Concentration
29768	NaCl	positive	growth	0-5 %

Observation

@ref	Observation
29768	aggregates in chains
67770	quinones: MK-9(H₆), MK-9(H₈), MK-9(H₄)

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
29768	22599 ChEBI	arabinose	+	carbon source
29768	17057 ChEBI	cellobiose	+	carbon source
29768	28260 ChEBI	galactose	+	carbon source
29768	17234 ChEBI	glucose	+	carbon source
29768	15428 ChEBI	glycine	+	carbon source
29768	27570 ChEBI	histidine	+	carbon source
29768	17716 ChEBI	lactose	+	carbon source
29768	17306 ChEBI	maltose	+	carbon source
29768	29864 ChEBI	mannitol	+	carbon source
29768	37684 ChEBI	mannose	+	carbon source
29768	28044 ChEBI	phenylalanine	+	carbon source
29768	26271 ChEBI	proline	+	carbon source
29768	16634 ChEBI	raffinose	+	carbon source
29768	33942 ChEBI	ribose	+	carbon source
29768	17992 ChEBI	sucrose	+	carbon source
29768	27082 ChEBI	trehalose	+	carbon source
29768	18222 ChEBI	xylose	+	carbon source

Enzymes

@ref	Value	Activity	Ec
29768	gelatinase	+
29768	urease	+	3.5.1.5

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Terrestrial	#Soil
#Engineered	#Agriculture	#Field
#Engineered	#Food production	#Aquaculture

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
18155	farm soil	Andhra Pradesh, Hyderabad region	India	IND	Asia
67770	Farm soil from the Hyderabad region of Andhra Pradesh	southern India	India	IND	Asia

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
18155	1	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	NCBI tax ID	Score
124043	ASM3954296v1 assembly for Streptomyces hyderabadensis JCM 17657	scaffold	GCA_039542965		598549	69.69
66792	ASM2040484v1 assembly for Streptomyces hyderabadensis JCM 17657	contig	GCA_020404845	598549.3	598549	45.42

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
18155	Streptomyces hyderabadensis partial 16S rRNA gene, strain OU-40	FM998652	1402		598549

GC content

@ref	GC-content (mol%)	Method
18155	70.2	thermal denaturation, midpoint method (Tm)
29768	70.2

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM3954296v1 assembly for Streptomyces hyderabadensis JCM 17657
NCBI: GCA_039542965

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	98.46	no
125439	motility	BacteriaNetⓘ	no	94.80	no
125439	gram_stain	BacteriaNetⓘ	positive	99.48	no
125439	spore_formation	BacteriaNetⓘ	yes	88.87	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Streptomyces hyderabadensis JCM 17657
NCBI: GCA_020404845.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	88.25	no
125438	anaerobic	anaerobicⓘ	no	98.90	yes
125438	aerobic	aerobicⓘ	yes	90.30	yes
125438	spore-forming	spore-formingⓘ	yes	92.65	yes
125438	thermophilic	thermophileⓘ	no	96.00	yes
125438	flagellated	motile2+ⓘ	no	87.50	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Streptomyces salinarius sp. nov., an actinomycete isolated from solar saltern soil.	Klanbut K, Rattanakavil T, Duangupama T, Suriyachadkun C, Herron PR, Thawai C.	Int J Syst Evol Microbiol	10.1099/ijsem.0.005863	2023
Phylogeny	Streptomyces leeuwenhoekii sp. nov., the producer of chaxalactins and chaxamycins, forms a distinct branch in Streptomyces gene trees.	Busarakam K, Bull AT, Girard G, Labeda DP, van Wezel GP, Goodfellow M	Antonie Van Leeuwenhoek	10.1007/s10482-014-0139-y	2014
Phylogeny	Streptomyces hyderabadensis sp. nov., an actinomycete isolated from soil.	Reddy TVK, Mahmood S, Paris L, Reddy YHK, Wellington EMH, Idris MM	Int J Syst Evol Microbiol	10.1099/ijs.0.020446-0	2010

References

#18155	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 42074
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#26148	IJSEM 76 2011 ( DOI 10.1099/ijs.0.020446-0 , PubMed 20154329 )
#29768	Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #26148
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Streptomyces hyderabadensis (DSM 42074, CCTCC AA 209024, JCM 17657)

Name and taxonomic classification

Morphology

Cell morphology

Pigmentation

Culture and growth conditions

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Observation

Metabolite utilization

Enzymes

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_039542965

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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