Chitinimonas arctica (KCTC 72602, CCTCC AB 2010422, JCM 34323)

Name: Chitinimonas arctica (KCTC 72602, CCTCC AB 2010422, JCM 34323)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 164755

Type strain

Culture col. no. KCTC 72602 CCTCC AB 2010422 JCM 34323

NCBI tax ID(s) 2594795

Special Collections JCM KCTC

History JCM <-- CCTCC AB 2010422 <-- F. Peng; CCTCC, China; R3-44.

Links

Chitinimonas arctica JCM 34323 is a bacterium that was isolated from Arctic tundra soil from Ny-Ålesund.

genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 25400

KCTC 72602

@ref 20215

Last LPSN update 2026-05-29 08:45:29

Domain Bacteria

Phylum Pseudomonadota

Class Betaproteobacteria

Order Neisseriales

Family Chitinibacteraceae

Genus Chitinimonas

Species Chitinimonas arctica

Full scientific name Chitinimonas arctica Xu et al. 2020

Morphology

Cell morphology

@ref	Gram stain	Confidence
125439	negative	96.369

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)
67770	positive	growth	28

Physiology and metabolism

Spore formation

@ref	Spore formation	Confidence
125439		99.718

Observation

67770

Observationquinones: Q-8

Isolation, sampling and environmental information

Isolation

@ref	Sample type	Country	Country ISO 3 Code	Continent
67770	Arctic tundra soil from Ny-Ålesund	Norway	NOR	Europe

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67770	ASM743134v1 assembly for Chitinimonas arctica R3-44	complete	GCA_007431345	2594795.3	2994003292	2594795	97.63

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
67770	Chitinimonas arctica 16S ribosomal RNA gene, partial sequence	MN153512	1414		2594795

GC content

@ref	GC-content (mol%)	Method
67770	60.8	genome sequence analysis

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM743134v1 assembly for Chitinimonas arctica R3-44
NCBI: GCA_007431345

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	aerobe	82.95	no
125439	motility	BacteriaNetⓘ	yes	64.52	no
125439	gram_stain	BacteriaNetⓘ	negative	96.37	no
125439	spore_formation	BacteriaNetⓘ	no	99.72	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Genetics	Genomic Analysis of a Novel Phage Infecting the Turkey Pathogen Escherichia coli APEC O78 and Its Endolysin Activity.	Deng S, Xu Q, Fu Y, Liang L, Wu Y, Peng F, Gao M.	Viruses	10.3390/v13061034	2021
Phylogeny	Chitinimonas arctica sp. nov., isolated from Arctic tundra soil.	Xu Q, Jiang F, Da X, Zhang Y, Geng Y, Qin K, Liu J, Peng F	Int J Syst Evol Microbiol	10.1099/ijsem.0.004194	2020

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Chitinimonas arctica (KCTC 72602, CCTCC AB 2010422, JCM 34323)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture temp

Physiology and metabolism

Spore formation

Observation

Isolation, sampling and environmental information

Isolation

Interaction and safety

Sequence information

Genome sequences

Genome browser: GCA_007431345

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

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