Name: Comamonas suwonensis JCM 34179
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 164744

Type strain:

Species: Comamonas suwonensis

Culture col. no.: JCM 34179, KCTC 82074, KEMB 1602-279

Strain history: S.-S. Lee; Kyonggi Univ., South Korea; EJ-4.

NCBI tax ID(s): 2606214 (species)

Section

Comamonas suwonensis JCM 34179 is a mesophilic bacterium that was isolated from Stream water from the Seo-ho river in Suwon.

mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Betaproteobacteria*
	Order	*Burkholderiales*
	Family	*Comamonadaceae*
	Genus	*Comamonas*
	Species	**Comamonas suwonensis**
	Full Scientific Name (LPSN)	Comamonas suwonensis Park et al. 2021

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	30 °C

[Ref.: #67770]

Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #67770]

Observation

quinones: Q-8

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Stream water from the Seo-ho river in Suwon
[Ref.: #67770]	Country	Republic of Korea
[Ref.: #67770]	Country ISO 3 Code	KOR
[Ref.: #67770]	Continent	Asia
* marker position based on {}

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Comamonas sp. EJ-4 16S ribosomal RNA gene, partial sequence	MN381948	1466	ENA	2606214 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Comamonas suwonensis EJ-4	GCA_012844455	contig	GenBank	2606214 tax ID

[Ref.: #67770]

GC-content

58.4 mol%

genome sequence analysis

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Comamonas suwonensis EJ-4 NCBI: GCA_012844455.1
[Ref.: #69480]	motile	yes	88.654	no
[Ref.: #69480]	flagellated	yes	71.946	no
[Ref.: #69480]	gram-positive	no	98.563	no
[Ref.: #69480]	anaerobic	no	98.814	no
[Ref.: #69480]	aerobic	yes	94.809	no
[Ref.: #69480]	halophile	no	95.989	no
[Ref.: #69480]	spore-forming	no	95.538	no
[Ref.: #69480]	thermophile	no	99.028	yes
[Ref.: #69480]	glucose-util	no	72.57	no
[Ref.: #69480]	glucose-ferment	no	90.142	no
[Ref.: #69480]	motile	yes	88.654	no
[Ref.: #69480]	flagellated	yes	71.946	no
[Ref.: #69480]	gram-positive	no	98.563	no
[Ref.: #69480]	anaerobic	no	98.814	no
[Ref.: #69480]	aerobic	yes	94.809	no
[Ref.: #69480]	halophile	no	95.989	no
[Ref.: #69480]	spore-forming	no	95.538	no
[Ref.: #69480]	thermophile	no	99.028	yes
[Ref.: #69480]	glucose-util	no	72.57	no
[Ref.: #69480]	glucose-ferment	no	90.142	no

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 34179, KCTC 82074, KEMB 1602-279

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Comamonas suwonensis sp. nov., isolated from stream water in the Republic of Korea.	Park KH, Yu Z, Dong K, Lee SS	Int J Syst Evol Microbiol	10.1099/ijsem.0.004681	2021	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Comamonas suwonensis in external resources:
SILVA
BRENDA
PANGAEA
StrainInfo
GBIF

Comamonas suwonensis EJ-4

Change proposal

Change proposal