Haloferax marinisediminis (JCM 34170)

Name: Haloferax marinisediminis (JCM 34170)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 164738

Type strain

Culture col. no. JCM 34170

NCBI tax ID(s) 2666142 2253

Special Collections JCM

History JCM <-- M.-J. Seo; Div. of Bioeng., Incheon Natl. Univ., South Korea; MBLA0077.

Links

Haloferax marinisediminis JCM 34170 is an archaeon that was isolated from Sea water from Youngheungdo Island.

genome sequence Archaea

Name and taxonomic classification

SI-ID 26915

KCTC 4289,JCM 34170

@ref 20215

Last LPSN update 2026-05-29 08:45:29

Domain Archaea

Phylum Methanobacteriota

Class Halobacteria

Order Halobacteriales

Family Haloferacaceae

Genus Haloferax

Species Haloferax marinisediminis

Full scientific name Haloferax marinisediminis Cho et al. 2025

Morphology

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)
67770	positive	growth	37

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125439	obligate aerobe	90.708

Spore formation

@ref	Spore formation	Confidence
125439		97.021

Isolation, sampling and environmental information

Isolation

@ref	Sample type	Country	Country ISO 3 Code	Continent
67770	Sea water from Youngheungdo Island	Republic of Korea	KOR	Asia

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67770	ASM967458v1 assembly for Haloferax marinisediminis MBLA0077	contig	GCA_009674585	2666142.3	3002709584	2666142	69.68

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM967458v1 assembly for Haloferax marinisediminis MBLA0077
NCBI: GCA_009674585

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	90.71	no
125439	motility	BacteriaNetⓘ	yes	47.66	no
125439	gram_stain	BacteriaNetⓘ	positive	47.26	no
125439	spore_formation	BacteriaNetⓘ	no	97.02	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Haloferax marinisediminis MBLA0077
NCBI: GCA_009674585.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	77.62	no
125438	anaerobic	anaerobicⓘ	no	68.49	no
125438	aerobic	aerobicⓘ	yes	74.75	no
125438	spore-forming	spore-formingⓘ	no	84.55	no
125438	thermophilic	thermophileⓘ	no	84.26	yes
125438	flagellated	motile2+ⓘ	no	86.00	no

Literature

Title	Authors	Journal	DOI	Year
Validation List no. 223. Valid publication of new names and new combinations effectively published outside the IJSEM.	Oren A, Goker M.	Int J Syst Evol Microbiol	10.1099/ijsem.0.006699	2025

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Haloferax marinisediminis (JCM 34170)

Name and taxonomic classification

Morphology

Culture and growth conditions

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Isolation, sampling and environmental information

Isolation

Interaction and safety

Sequence information

Genome sequences

Genome browser: GCA_009674585

Genome-based predictions

Predictions

Literature

Literature

References

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