Name: Eikenella longinqua JCM 34134
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 164734

Type strain:

Species: Eikenella longinqua

Culture col. no.: JCM 34134, LMG 30896, NCTC 14179, NML 02-A-017

Strain history: LMG 30896 <-- B. Kathy; Natl. Microbiol. Lab., Public Health Agency of Canada, Canada <-- Alberta Health Services., Canada; R719/02.

NCBI tax ID(s): 1795827 (species)

Special Collections

Section

Eikenella longinqua JCM 34134 is a mesophilic, Gram-negative bacterium that was isolated from Blood culture of a patient in Edmonton.

Gram-negative
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	09-12-2024 (DD-MM-YYYY)
	Domain	*Bacteria*
	Phylum	*Pseudomonadota*
	Class	*Betaproteobacteria*
	Order	*Neisseriales*
	Family	*Neisseriaceae*
	Genus	*Eikenella*
	Species	**Eikenella longinqua**
	Full Scientific Name (LPSN)	Eikenella longinqua Bernard et al. 2020

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	negative Confidence in %98.478

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	37 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69480]

Ability of spore formation

no Confidence in %90.957

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Blood culture of a patient in Edmonton
[Ref.: #67770]	Geographic location (country and/or sea, region)	Alberta
[Ref.: #67770]	Country	Canada
[Ref.: #67770]	Country ISO 3 Code	CAN
[Ref.: #67770]	Continent	North America
* marker position based on {}

[Ref.: #69479]

Global distribution of 16S sequence KU663110 (>99% sequence identity) for Neisseria from Microbeatlas

Aquatic Samples	23
Soil Samples	112
Animal Samples	1020
Plant Samples	2
Total Samples	1157

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Eikenella longinqua strain NML02-A-017 16S ribosomal RNA gene, partial sequence	KU663110	1480	GenBank ENA	1795827 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Eikenella longinqua NML02-A-017	GCA_001648355	contig	GenBank ENA	1795827 tax ID

[Ref.: #67770]

GC-content

58.8 mol%

genome sequence analysis

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Eikenella longinqua NML02-A-017 NCBI: GCA_001648355.1
[Ref.: #69480]	gram-positive	gram-positiveⓘ	no	98.478	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	92.349	no
[Ref.: #69480]	aerobic	aerobicⓘ	yes	50.546	no
[Ref.: #69480]	spore-forming	spore-formingⓘ	no	90.957	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	97.332	yes
[Ref.: #69480]	flagellated	motile2+ⓘ	no	83.246	no

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 34134, LMG 30896, NCTC 14179, NML 02-A-017

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Eikenella glucosivorans sp. nov., isolated from a human throat swab, and emendation of the genus Eikenella to include saccharolytic species.	Hering S, Jansson MK, Buhl MEJ	Int J Syst Evol Microbiol	10.1099/ijsem.0.004977	2021	*
Phylogeny	Description of Eikenella halliae sp. nov. and Eikenella longinqua sp. nov., derived from human clinical materials, emendation of Eikenella exigua Stormo et al. 2019 and emendation of the genus Eikenella to include species which are strict anaerobes.	Bernard KA, Burdz T, Wiebe D, Bernier AM	Int J Syst Evol Microbiol	10.1099/ijsem.0.004150	2020	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

* These data were automatically processed and therefore are not curated

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Eikenella longinqua NML02-A-017

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