Name: Marisediminicola senii JCM 33936
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 164693

Type strain:

Species: Marisediminicola senii

Culture col. no.: JCM 33936, LMG 31795, MCC 4327

Strain history: A. Sharma; NCCS, India; SM7_A14.

NCBI tax ID(s): 2711233 (species)

Section

Marisediminicola senii JCM 33936 is a psychrophilic bacterium that was isolated from Glacier sediment from the Queen Maud Land.

psychrophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Micrococcales*
	Family	*Microbacteriaceae*
	Genus	*Marisediminicola*
	Species	**Marisediminicola senii**
	Full Scientific Name (LPSN)	Marisediminicola senii Jani et al. 2021

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	20 °C

[Ref.: #67770]

Temperature range

psychrophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Glacier sediment from the Queen Maud Land
[Ref.: #67770]	Country	Antarctica
[Ref.: #67770]	Country ISO 3 Code	ATA
[Ref.: #67770]	Continent	Antarctica
* marker position based on {}

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Marisediminicola sp. strain SM7_A14 16S ribosomal RNA gene, partial sequence	MT084553	1482	ENA	2711233 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Marisediminicola senii SM7_A14	GCA_011057645	contig	GenBank	2711233 tax ID

[Ref.: #67770]

GC-content

68.5 mol%

genome sequence analysis

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Marisediminicola senii SM7_A14 NCBI: GCA_011057645.1
[Ref.: #69480]	motile	no	88.541	no
[Ref.: #69480]	flagellated	no	96.934	no
[Ref.: #69480]	gram-positive	yes	92.916	no
[Ref.: #69480]	anaerobic	no	99.683	no
[Ref.: #69480]	aerobic	yes	95.418	no
[Ref.: #69480]	halophile	no	89.812	no
[Ref.: #69480]	spore-forming	no	93.797	no
[Ref.: #69480]	thermophile	no	99.539	yes
[Ref.: #69480]	glucose-util	yes	85.808	no
[Ref.: #69480]	glucose-ferment	no	90.431	no

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 33936, LMG 31795, MCC 4327

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Marisediminicola senii sp. nov. isolated from Queen Maud Land, Antarctica.	Jani K, Kajale S, Shetye M, Palkar S, Sharma A	Int J Syst Evol Microbiol	10.1099/ijsem.0.004641	2021	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

* These data were automatically processed and therefore are not curated

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Marisediminicola senii SM7_A14

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