Pseudarthrobacter psychrotolerans (KACC 21510, JCM 33881)

Name: Pseudarthrobacter psychrotolerans (KACC 21510, JCM 33881)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 164687

Type strain

Culture col. no. KACC 21510 JCM 33881

NCBI tax ID(s) 2697569

Special Collections JCM

History JCM <-- W. Park; Korea Univ., South Korea; YJ56.

Links

Pseudarthrobacter psychrotolerans JCM 33881 is a bacterium that was isolated from Antarctic soil from the Cape Burk area.

genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 132999

JCM 33881

@ref 20215

Last LPSN update 2026-05-29 08:45:28

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Micrococcales

Family Micrococcaceae

Genus Pseudarthrobacter

Species Pseudarthrobacter psychrotolerans

Full scientific name Pseudarthrobacter psychrotolerans Shin et al. 2020

Morphology

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)
67770	positive	growth	13

Physiology and metabolism

Spore formation

@ref	Spore formation	Confidence
125439		96.839

Observation

67770

Observationquinones: MK-9(H₂)

Isolation, sampling and environmental information

Isolation

67770

Sample typeAntarctic soil from the Cape Burk area

Taxonmaps

69479

Global distribution of 16S sequence MN559964 (>99% sequence identity) for Pseudarthrobacter from Microbeatlas

Aquatic Samples	109
Soil Samples	822
Animal Samples	156
Plant Samples	439
Total Samples	1526

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67770	ASM991179v1 assembly for Pseudarthrobacter psychrotolerans YJ56	complete	GCA_009911795	2697569.3	2884158744	2697569	66.28

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
67770	Pseudarthrobacter psychrotolerans strain YJ56 16S ribosomal RNA gene, partial sequence	MN559964	1378		2697569

GC content

@ref	GC-content (mol%)	Method
67770	64.7	genome sequence analysis

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM991179v1 assembly for Pseudarthrobacter psychrotolerans YJ56
NCBI: GCA_009911795

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	84.57	no
125439	motility	BacteriaNetⓘ	no	63.43	no
125439	gram_stain	BacteriaNetⓘ	positive	54.96	no
125439	spore_formation	BacteriaNetⓘ	no	96.84	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Pseudarthrobacter psychrotolerans sp. nov., a cold-adapted bacterium isolated from Antarctic soil.	Shin Y, Lee BH, Lee KE, Park W	Int J Syst Evol Microbiol	10.1099/ijsem.0.004505	2020

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Pseudarthrobacter psychrotolerans (KACC 21510, JCM 33881)

Name and taxonomic classification

Morphology

Culture and growth conditions

Culture temp

Physiology and metabolism

Spore formation

Observation

Isolation, sampling and environmental information

Isolation

Taxonmaps

Interaction and safety

Sequence information

Genome sequences

Genome browser: GCA_009911795

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

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