Name: Nonomuraea terrae CH32
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 164685

Type strain:

Species: Nonomuraea terrae

Strain Designation: CH32

Culture col. no.: JCM 33876, KCTC 49368

Strain history: H. Ay; Ondokuz Mayis Univ., Turkey; CH32.

NCBI tax ID(s): 2530383 (species)

Section

Nonomuraea terrae CH32 is an aerobe, mesophilic, Gram-positive bacterium that was isolated from Soil in Malatya.

Gram-positive
aerobe
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Streptosporangiales*
	Family	*Streptosporangiaceae*
	Genus	*Nonomuraea*
	Species	**Nonomuraea terrae**
	Full Scientific Name (LPSN)	Nonomuraea terrae Ay 2021

Information on morphological and physiological properties Morphology

[Ref.: #68048]	Gram stain	positive

[Ref.: #68048]

Colony color

cream

Information on culture and growth conditions Culture and growth conditions

		Temperature
[Ref.: #67770]	growth	30 °C
[Ref.: #68048]	growth	28-37 °C
[Ref.: #68048]	optimum	30 °C

[Ref.: #67770]	Temperature range	mesophilic
[Ref.: #68048]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #68048]			optimum	7
[Ref.: #68048]			growth	7.0-10.0

Information on physiology and metabolism Physiology and metabolism

[Ref.: #68048]

Oxygen tolerance

aerobe

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #68048]		NaCl		growth	0.0-3.0	%

[Ref.: #67770]	Observation	quinones: MK-9(H₄), MK-9(H₆), MK-9(H₂)
[Ref.: #68048]	Observation	aerial hyphae
[Ref.: #68048]	Observation	The cell wall contains meso-diaminopimelic acid and the whole-cell sugars are glucose, ribose, galactose, mannose and madurose.
[Ref.: #68048]	Observation	The predominant menaquinones are MK-9(H4), MK-9(H6) and MK-9(H2) while MK-9 exists as minor component.
[Ref.: #68048]	Observation	The polar lipid profile is consisted of diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylglycerol, phosphatidylinositol, glycolipid, glycophospholipids, phospholipids and unidentified lipids

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68048]	(+)-D-galactose	+	carbon source
[Ref.: #68048]	allantoin ChEBI	-	hydrolysis
[Ref.: #68048]	arabinose ChEBI	+	carbon source
[Ref.: #68048]	arbutin ChEBI	+	hydrolysis
[Ref.: #68048]	casein	-	degradation
[Ref.: #68048]	cellobiose ChEBI	+	carbon source
[Ref.: #68048]	D-glucose ChEBI	+	carbon source
[Ref.: #68048]	D-mannose ChEBI	+	carbon source
[Ref.: #68048]	dextrin ChEBI	+	carbon source
[Ref.: #68048]	esculin ChEBI	+	hydrolysis
[Ref.: #68048]	fructose ChEBI	+	carbon source
[Ref.: #68048]	gelatin ChEBI	+	reduction
[Ref.: #68048]	glycine ChEBI	+	nitrogen source
[Ref.: #68048]	guanine ChEBI	+	degradation
[Ref.: #68048]	hydroxyproline ChEBI	+	nitrogen source
[Ref.: #68048]	hypoxanthine ChEBI	-	degradation
[Ref.: #68048]	inulin ChEBI	+	carbon source
[Ref.: #68048]	L-arabinose ChEBI	+	carbon source
[Ref.: #68048]	L-asparagine ChEBI	+	nitrogen source
[Ref.: #68048]	L-cysteine ChEBI	-	nitrogen source
[Ref.: #68048]	L-glutamine ChEBI	-	nitrogen source
[Ref.: #68048]	L-histidine ChEBI	-	nitrogen source
[Ref.: #68048]	L-isoleucine ChEBI	+	nitrogen source
[Ref.: #68048]	L-methionine ChEBI	+	nitrogen source
[Ref.: #68048]	L-phenylalanine ChEBI	-	nitrogen source
[Ref.: #68048]	L-proline ChEBI	+	nitrogen source
[Ref.: #68048]	L-serine ChEBI	-	nitrogen source
[Ref.: #68048]	L-tyrosine ChEBI	-	nitrogen source
[Ref.: #68048]	L-valine ChEBI	-	nitrogen source
[Ref.: #68048]	lactose ChEBI	+	carbon source
[Ref.: #68048]	melezitose ChEBI	+	carbon source
[Ref.: #68048]	myo-inositol ChEBI	-	carbon source
[Ref.: #68048]	nitrate ChEBI	+	reduction
[Ref.: #68048]	raffinose ChEBI	+	carbon source
[Ref.: #68048]	rhamnose ChEBI	+	carbon source
[Ref.: #68048]	sorbitol ChEBI	-	carbon source
[Ref.: #68048]	starch ChEBI	-	degradation
[Ref.: #68048]	succinate ChEBI	-	carbon source
[Ref.: #68048]	sucrose ChEBI	+	carbon source
[Ref.: #68048]	xanthine ChEBI	-	degradation
[Ref.: #68048]	xylan ChEBI	+	degradation
[Ref.: #68048]	xylitol ChEBI	-	carbon source
[Ref.: #68048]	xylose ChEBI	+	carbon source
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite	Production
[Ref.: #68048]		hydrogen sulfide ChEBI	no

Fatty acid profile

Metadata FA analysis

Reference

[Ref.: #68048]

Fatty acid	Percentage
C16:0 iso	26.2
C17:0 10-methyl	19.2
C17:1 w9c	8.7
C16:0 2OH	8.6
C16:1 iso G	8.1
C15:0 iso	3.7
C16:0	3.4
C16:0 10-ME	3.4
C17:0	2
C16:1 w9c	2
C18:0 iso 10-ME	1.9
C15:0	1.8
C17:0 iso	1.7
C18:0 10-methly	1.5
C15:0 3OH	1.1
C18:1 w9c	1

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Soil in Malatya
[Ref.: #67770]	Country	Turkey
[Ref.: #67770]	Country ISO 3 Code	TUR
[Ref.: #67770]	Continent	Asia

[Ref.: #68048]	Sample type/isolated from	soil, altitude 1150 m
[Ref.: #68048]	Geographic location (country and/or sea, region)	Malatya
[Ref.: #68048]	Country	Turkey
[Ref.: #68048]	Country ISO 3 Code	TUR
[Ref.: #68048]	Continent	Asia
[Ref.: #68048]	Geographic location	38.8822°/37.8933°
* marker position based on {}

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #68048]	Nonomuraea sp. strain CH32 16S ribosomal RNA gene, partial sequence	MG211700	1471	ENA	2530383 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #68048]	Nonomuraea terrae CH32	GCA_004348995	contig	GenBank	2530383 tax ID
[Ref.: #66792]	Nonomuraea terrae CH32	2866783905	draft	JGI IMG/M	2530383 tax ID	*

[Ref.: #68048]

GC-content

71 mol%

genome sequence analysis

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 33876, KCTC 49368

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Nonomuraea terrae sp. nov., isolated from arid soil.	Ay H	Arch Microbiol	10.1007/s00203-020-01941-9	2020	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68048

Hilal Ay: Nonomuraea terrae sp. nov., isolated from arid soil. Arch Microbiol 202: 2197 - 2205 2020 ( DOI 10.1007/s00203-020-01941-9 )

* These data were automatically processed and therefore are not curated

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