Paucilactobacillus kaifaensis (NCIMB 15191, LMG 31177, CCM 8929)

Name: Paucilactobacillus kaifaensis (NCIMB 15191, LMG 31177, CCM 8929)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 164671

Type strain

Culture col. no. NCIMB 15191 LMG 31177 CCM 8929 JCM 33831

NCBI tax ID(s) 2559921

Special Collections JCM

History LMG 31177 <-- C. T. Gu; Coll. of Life Sci., Northeast Agric. Univ., China; 778-3.

Links

Paucilactobacillus kaifaensis JCM 33831 is a mesophilic prokaryote that was isolated from Traditional pickle in Harbin.

mesophilic genome sequence 16S sequence

Name and taxonomic classification

SI-ID 272712

LMG 31177,NCIMB 15191

@ref 20215

Last LPSN update 2026-02-09 11:39:54

Domain Bacteria

Phylum Bacillota

Class Bacilli

Order Lactobacillales

Family Lactobacillaceae

Genus Paucilactobacillus

Species Paucilactobacillus kaifaensis

Full scientific name Paucilactobacillus kaifaensis (Liu and Gu 2019) Zheng et al. 2020

Synonyms (1)

Lactobacillus kaifaensis

Morphology

Cell morphology

@ref	Motility	Confidence
125438		93.5

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
67770	positive	growth	30	mesophilic

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125439	obligate aerobe	96.5

Spore formation

@ref	Spore formation	Confidence
125438		93.992

Isolation, sampling and environmental information

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
67770	Traditional pickle in Harbin	Heilongjiang Province	China	CHN	Asia

Taxonmaps

69479

Global distribution of 16S sequence LC438525 (>99% sequence identity) for Paucilactobacillus from Microbeatlas

Aquatic Samples	56
Soil Samples	58
Animal Samples	362
Plant Samples	74
Total Samples	550

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67770	ASM540514v1 assembly for Paucilactobacillus kaifaensis 778-3	contig	GCA_005405145	2559921.3	2996568347	2559921	44.45

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
67770	Lactobacillus sp. 778-3 gene for 16S ribosomal RNA, partial sequence	LC438525	1436		2559921

GC content

67770

GC-content (mol%)38

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Paucilactobacillus kaifaensis 778-3
NCBI: GCA_005405145

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	yes	77.80	no
125439	motility	BacteriaNetⓘ	yes	71.10	no
125439	gram_stain	BacteriaNetⓘ	positive	71.80	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	96.50	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Lactobacillus sp. 778-3
PATRIC: 2559921.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	83.39	no
125438	anaerobic	anaerobicⓘ	no	70.34	no
125438	spore-forming	spore-formingⓘ	no	93.99	no
125438	aerobic	aerobicⓘ	no	93.38	no
125438	thermophilic	thermophileⓘ	no	94.91	no
125438	flagellated	motile2+ⓘ	no	93.50	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Lactobacillus pingfangensis sp. nov., Lactobacillus daoliensis sp. nov., Lactobacillus nangangensis sp. nov., Lactobacillus daowaiensis sp. nov., Lactobacillus dongliensis sp. nov., Lactobacillus songbeiensis sp. nov. and Lactobacillus kaifaensis sp. nov., isolated from traditional Chinese pickle.	Liu DD, Gu CT	Int J Syst Evol Microbiol	10.1099/ijsem.0.003619	2019

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Paucilactobacillus kaifaensis (NCIMB 15191, LMG 31177, CCM 8929)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Isolation, sampling and environmental information

Isolation

Taxonmaps

Interaction and safety

Sequence information

Genome sequences

Genome browser: GCA_005405145

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

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