Name: Chryseobacterium vaccae JCM 33749
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 164642

Type strain:

Species: Chryseobacterium vaccae

Culture col. no.: JCM 33749, KACC 21402

Strain history: G.-B. Kim; Chung-Ang Univ., South Korea; CA7.

NCBI tax ID(s): 2604424 (species)

Section

Chryseobacterium vaccae JCM 33749 is a mesophilic bacterium that was isolated from Raw cow's milk from a farm affliated to Chung-Ang University.

mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacteroidota*
	Class	*Flavobacteriia*
	Order	*Flavobacteriales*
	Family	*Weeksellaceae*
	Genus	*Chryseobacterium*
	Species	**Chryseobacterium vaccae**
	Full Scientific Name (LPSN)	Chryseobacterium vaccae Lee et al. 2020

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	30 °C

[Ref.: #67770]

Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #67770]

Observation

quinones: MK-6

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Raw cow's milk from a farm affliated to Chung-Ang University
[Ref.: #67770]	Geographic location (country and/or sea, region)	Anseong
[Ref.: #67770]	Country	Republic of Korea
[Ref.: #67770]	Country ISO 3 Code	KOR
[Ref.: #67770]	Continent	Asia
* marker position based on {}

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Chryseobacterium sp. CA7 16S ribosomal RNA gene, partial sequence	MN328031	1440	ENA	2604424 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Chryseobacterium vaccae CA7	GCA_009602705	contig	GenBank	2604424 tax ID

[Ref.: #67770]

GC-content

37.4 mol%

genome sequence analysis

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Chryseobacterium vaccae CA7 NCBI: GCA_009602705.1
[Ref.: #69480]	motile	no	92.999	no
[Ref.: #69480]	flagellated	no	96.654	no
[Ref.: #69480]	gram-positive	no	97.616	no
[Ref.: #69480]	anaerobic	no	99.538	no
[Ref.: #69480]	aerobic	yes	89.758	no
[Ref.: #69480]	halophile	no	95.295	no
[Ref.: #69480]	spore-forming	no	93.057	no
[Ref.: #69480]	glucose-util	yes	83.408	no
[Ref.: #69480]	thermophile	no	99.805	no
[Ref.: #69480]	glucose-ferment	no	92.744	no

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 33749, KACC 21402

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Chryseobacterium vaccae sp. nov., isolated from raw cow's milk.	Lee JE, Yoon SH, Lee GY, Lee DH, Huh CS, Kim GB	Int J Syst Evol Microbiol	10.1099/ijsem.0.004250	2020	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

* These data were automatically processed and therefore are not curated

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Chryseobacterium vaccae CA7

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